RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 PGBD3Q8N328 593 aa16.48■□□□□ 0.23
UFD1-209ENST00000489406 APPL2Q8NEU8 664 aa16.48■□□□□ 0.23
UFD1-209ENST00000489406 RUFY2Q8WXA3 655 aa16.48■□□□□ 0.23
UFD1-209ENST00000489406 SUSD3Q96L08 255 aa16.48■□□□□ 0.23
UFD1-209ENST00000489406 POLR3FQ9H1D9 316 aaPredicted RBP16.48■□□□□ 0.23
UFD1-209ENST00000489406 VAV3Q9UKW4 847 aa16.48■□□□□ 0.23
UFD1-209ENST00000489406 SLC28A2O43868 658 aa16.47■□□□□ 0.23
UFD1-209ENST00000489406 HLA-EP13747 358 aa16.47■□□□□ 0.23
UFD1-209ENST00000489406 LIG1P18858 919 aa16.47■□□□□ 0.23
UFD1-209ENST00000489406 MARCKSP29966 332 aaPredicted RBP16.47■□□□□ 0.23
UFD1-209ENST00000489406 MCM4P33991 863 aa16.47■□□□□ 0.23
UFD1-209ENST00000489406 AVPR1AP37288 418 aa16.47■□□□□ 0.23
UFD1-209ENST00000489406 HDAC1Q13547 482 aaPredicted RBP16.47■□□□□ 0.23
UFD1-209ENST00000489406 CENPPQ6IPU0 288 aa16.47■□□□□ 0.23
UFD1-209ENST00000489406 ITIH5Q86UX2 942 aa16.47■□□□□ 0.23
UFD1-209ENST00000489406 FMNL3Q8IVF7 1028 aa16.47■□□□□ 0.23
UFD1-209ENST00000489406 TTC9BQ8N6N2 239 aa16.47■□□□□ 0.23
UFD1-209ENST00000489406 HMGB4Q8WW32 186 aa16.47■□□□□ 0.23
UFD1-209ENST00000489406 DYDC2Q96IM9 177 aa16.47■□□□□ 0.23
UFD1-209ENST00000489406 GCNAQ96QF7 691 aa16.47■□□□□ 0.23
UFD1-209ENST00000489406 SEMA4CQ9C0C4 833 aa16.47■□□□□ 0.23
UFD1-209ENST00000489406 IL21Q9HBE4 155 aa16.47■□□□□ 0.23
UFD1-209ENST00000489406 TRIP11Q15643 1979 aa16.47■□□□□ 0.23
UFD1-209ENST00000489406 HELZP42694 1942 aaKnown RBP16.47■□□□□ 0.23
UFD1-209ENST00000489406 ERVH48-1M5A8F1 160 aa16.46■□□□□ 0.23
UFD1-209ENST00000489406 PLK4O00444 970 aa16.46■□□□□ 0.23
UFD1-209ENST00000489406 DKK1O94907 266 aa16.46■□□□□ 0.23
UFD1-209ENST00000489406 CDC25CP30307 473 aa16.46■□□□□ 0.23
UFD1-209ENST00000489406 ADD1P35611 737 aaKnown RBP16.46■□□□□ 0.23
UFD1-209ENST00000489406 SEMG2Q02383 582 aa16.46■□□□□ 0.23
UFD1-209ENST00000489406 EPHA7Q15375 998 aa16.46■□□□□ 0.23
UFD1-209ENST00000489406 FAM187BQ17R55 369 aa16.46■□□□□ 0.23
UFD1-209ENST00000489406 COLEC12Q5KU26 742 aa16.46■□□□□ 0.23
UFD1-209ENST00000489406 CHD1LQ86WJ1 897 aa16.46■□□□□ 0.23
UFD1-209ENST00000489406 ALLCQ8N6M5 410 aa16.46■□□□□ 0.23
UFD1-209ENST00000489406 MAB21L3Q8N8X9 362 aa16.46■□□□□ 0.23
UFD1-209ENST00000489406 ATAD1Q8NBU5 361 aa16.46■□□□□ 0.23
UFD1-209ENST00000489406 TTC16Q8NEE8 873 aa16.46■□□□□ 0.23
UFD1-209ENST00000489406 LPIN3Q9BQK8 851 aa16.46■□□□□ 0.23
UFD1-209ENST00000489406 ZSWIM4Q9H7M6 989 aa16.46■□□□□ 0.23
UFD1-209ENST00000489406 TDP1Q9NUW8 608 aa16.46■□□□□ 0.23
UFD1-209ENST00000489406 CEP192Q8TEP8 1941 aa16.45■□□□□ 0.22
UFD1-209ENST00000489406 A0A1W2PQD8 194 aa16.45■□□□□ 0.22
UFD1-209ENST00000489406 DGAT1O75907 488 aa16.45■□□□□ 0.22
UFD1-209ENST00000489406 EDN1P05305 212 aa16.45■□□□□ 0.22
UFD1-209ENST00000489406 CXADRP78310 365 aa16.45■□□□□ 0.22
UFD1-209ENST00000489406 MAEAQ7L5Y9 396 aa16.45■□□□□ 0.22
UFD1-209ENST00000489406 SLC41A1Q8IVJ1 513 aa16.45■□□□□ 0.22
UFD1-209ENST00000489406 ZBTB8OSQ8IWT0 167 aa16.45■□□□□ 0.22
UFD1-209ENST00000489406 TPH2Q8IWU9 490 aa16.45■□□□□ 0.22
UFD1-209ENST00000489406 TXNDC5Q8NBS9 432 aaKnown RBP16.45■□□□□ 0.22
UFD1-209ENST00000489406 GPRC5CQ9NQ84 441 aa16.45■□□□□ 0.22
UFD1-209ENST00000489406 DUS2Q9NX74 493 aaKnown RBP16.45■□□□□ 0.22
UFD1-209ENST00000489406 DDX25Q9UHL0 483 aaKnown RBP16.45■□□□□ 0.22
UFD1-209ENST00000489406 TIMM13Q9Y5L4 95 aaPredicted RBP16.45■□□□□ 0.22
UFD1-209ENST00000489406 COL5A1P20908 1838 aaPredicted RBP16.45■□□□□ 0.22
UFD1-209ENST00000489406 E9PAM4 449 aa16.44■□□□□ 0.22
UFD1-209ENST00000489406 SGK1O00141 431 aa16.44■□□□□ 0.22
UFD1-209ENST00000489406 SLC37A4O43826 429 aa16.44■□□□□ 0.22
UFD1-209ENST00000489406 KLF8O95600 359 aaPredicted RBP16.44■□□□□ 0.22
UFD1-209ENST00000489406 CSRP3P50461 194 aa16.44■□□□□ 0.22
UFD1-209ENST00000489406 YWHAHQ04917 246 aaPredicted RBP16.44■□□□□ 0.22
UFD1-209ENST00000489406 GRIK2Q13002 908 aa16.44■□□□□ 0.22
UFD1-209ENST00000489406 GPR17Q13304 367 aa16.44■□□□□ 0.22
UFD1-209ENST00000489406 DCAF4L1Q3SXM0 396 aa16.44■□□□□ 0.22
UFD1-209ENST00000489406 CCDC157Q569K6 752 aa16.44■□□□□ 0.22
UFD1-209ENST00000489406 PPP4R3AQ6IN85 833 aa16.44■□□□□ 0.22
UFD1-209ENST00000489406 RGL4Q8IZJ4 473 aa16.44■□□□□ 0.22
UFD1-209ENST00000489406 PI4K2AQ9BTU6 479 aa16.44■□□□□ 0.22
UFD1-209ENST00000489406 KIF9Q9HAQ2 790 aa16.44■□□□□ 0.22
UFD1-209ENST00000489406 SLC38A7Q9NVC3 462 aa16.44■□□□□ 0.22
UFD1-209ENST00000489406 PCDHB8Q9UN66 801 aa16.44■□□□□ 0.22
UFD1-209ENST00000489406 WNT6Q9Y6F9 365 aa16.44■□□□□ 0.22
UFD1-209ENST00000489406 PLXND1Q9Y4D7 1925 aa16.43■□□□□ 0.22
UFD1-209ENST00000489406 MTMR11A4FU01 709 aa16.43■□□□□ 0.22
UFD1-209ENST00000489406 CHMLP26374 656 aa16.43■□□□□ 0.22
UFD1-209ENST00000489406 NMT1P30419 496 aaKnown RBP16.43■□□□□ 0.22
UFD1-209ENST00000489406 IFNAR2P48551 515 aa16.43■□□□□ 0.22
UFD1-209ENST00000489406 MRPS21P82921 87 aaKnown RBP16.43■□□□□ 0.22
UFD1-209ENST00000489406 LY6DQ14210 128 aa16.43■□□□□ 0.22
UFD1-209ENST00000489406 MTF1Q14872 753 aa16.43■□□□□ 0.22
UFD1-209ENST00000489406 CDCA2Q69YH5 1023 aaPredicted RBP16.43■□□□□ 0.22
UFD1-209ENST00000489406 NCAPH2Q6IBW4 605 aa16.43■□□□□ 0.22
UFD1-209ENST00000489406 SLC36A4Q6YBV0 504 aa16.43■□□□□ 0.22
UFD1-209ENST00000489406 CCDC148Q8NFR7 591 aa16.43■□□□□ 0.22
UFD1-209ENST00000489406 BAHD1Q8TBE0 780 aaPredicted RBP16.43■□□□□ 0.22
UFD1-209ENST00000489406 RHBDD1Q8TEB9 315 aa16.43■□□□□ 0.22
UFD1-209ENST00000489406 TCEANC2Q96MN5 208 aa16.43■□□□□ 0.22
UFD1-209ENST00000489406 ZMAT2Q96NC0 199 aaKnown RBP16.43■□□□□ 0.22
UFD1-209ENST00000489406 VPS54Q9P1Q0 977 aa16.43■□□□□ 0.22
UFD1-209ENST00000489406 NAP1L2Q9ULW6 460 aaPredicted RBP16.43■□□□□ 0.22
UFD1-209ENST00000489406 KLF18A0A0U1RQI7 1052 aa16.42■□□□□ 0.22
UFD1-209ENST00000489406 TCRBV21S2A2A0A5A6 115 aa16.42■□□□□ 0.22
UFD1-209ENST00000489406 ACKR2O00590 384 aa16.42■□□□□ 0.22
UFD1-209ENST00000489406 SGSM2O43147 1006 aa16.42■□□□□ 0.22
UFD1-209ENST00000489406 OAZ2O95190 189 aa16.42■□□□□ 0.22
UFD1-209ENST00000489406 C6P13671 934 aa16.42■□□□□ 0.22
UFD1-209ENST00000489406 RPL9P32969 192 aaKnown RBP16.42■□□□□ 0.22
UFD1-209ENST00000489406 TIE1P35590 1138 aa16.42■□□□□ 0.22
UFD1-209ENST00000489406 CDR1P51861 262 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms