RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 TFAMQ00059 246 aaKnown RBP17.16■□□□□ 0.34
ERGIC3-217ENST00000488935 RESTQ13127 1097 aa17.16■□□□□ 0.34
ERGIC3-217ENST00000488935 TRIM68Q6AZZ1 485 aa17.16■□□□□ 0.34
ERGIC3-217ENST00000488935 METTL23Q86XA0 190 aa17.16■□□□□ 0.34
ERGIC3-217ENST00000488935 TTC16Q8NEE8 873 aa17.16■□□□□ 0.34
ERGIC3-217ENST00000488935 HPS3Q969F9 1004 aa17.16■□□□□ 0.34
ERGIC3-217ENST00000488935 OXCT2Q9BYC2 517 aaPredicted RBP17.16■□□□□ 0.34
ERGIC3-217ENST00000488935 GPR88Q9GZN0 384 aa17.16■□□□□ 0.34
ERGIC3-217ENST00000488935 EPC1Q9H2F5 836 aa17.16■□□□□ 0.34
ERGIC3-217ENST00000488935 ASB7Q9H672 318 aa17.16■□□□□ 0.34
ERGIC3-217ENST00000488935 USP18Q9UMW8 372 aa17.16■□□□□ 0.34
ERGIC3-217ENST00000488935 MAGED2Q9UNF1 606 aaPredicted RBP17.16■□□□□ 0.34
ERGIC3-217ENST00000488935 AGAP1Q9UPQ3 857 aa17.16■□□□□ 0.34
ERGIC3-217ENST00000488935 CCL26Q9Y258 94 aa17.16■□□□□ 0.34
ERGIC3-217ENST00000488935 DERAQ9Y315 318 aa17.16■□□□□ 0.34
ERGIC3-217ENST00000488935 KPNA7A9QM74 516 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 PPP1R37O75864 691 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 PRPF6O94906 941 aaKnown RBP17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 GCNT3O95395 438 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 BMP15O95972 392 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 HAPLN1P10915 354 aaPredicted RBP17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 TGM1P22735 817 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 CXCL12P48061 93 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 FCHO2Q0JRZ9 810 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 SPEM2Q0P670 501 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 CUL4AQ13619 759 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 TAF12Q16514 161 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 ARHGAP15Q53QZ3 475 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 SLFN12LQ6IEE8 588 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 PKN3Q6P5Z2 889 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 TMEM150AQ86TG1 271 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 OSTM1Q86WC4 334 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 THEM5Q8N1Q8 247 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 MAB21L3Q8N8X9 362 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 GLIS3Q8NEA6 775 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 RIN3Q8TB24 985 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 CBWD1Q9BRT8 395 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 STRA6Q9BX79 667 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 TASP1Q9H6P5 420 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 TRPV5Q9NQA5 729 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 C2CD2Q9Y426 696 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 ASB3Q9Y575 518 aa17.15■□□□□ 0.34
ERGIC3-217ENST00000488935 CACNA1AO00555 2505 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 OBSL1O75147 1896 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 DCDC2BA2VCK2 349 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 OTOL1A6NHN0 477 aaPredicted RBP17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 HRO43593 1189 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 ITGB3P05106 788 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 SYT1P21579 422 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 CTHP32929 405 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 PXNP49023 591 aaPredicted RBP17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 BFSP1Q12934 665 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 PUM1Q14671 1186 aaKnown RBP eCLIP17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 DDR2Q16832 855 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 NAIF1Q69YI7 327 aaPredicted RBP17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 TXNDC8Q6A555 127 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 SV2BQ7L1I2 683 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 ITIH5Q86UX2 942 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 PDILTQ8N807 584 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 C1orf127Q8N9H9 656 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 ACCSQ96QU6 501 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 USP28Q96RU2 1077 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 TSPAN18Q96SJ8 248 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 ST6GALNAC4Q9H4F1 302 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 PDE11AQ9HCR9 933 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 GKN1Q9NS71 199 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 CCDC39Q9UFE4 941 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 L1RE1Q9UN81 338 aa17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 SRPRBQ9Y5M8 271 aaKnown RBP17.14■□□□□ 0.33
ERGIC3-217ENST00000488935 MYBPHLA2RUH7 354 aa17.13■□□□□ 0.33
ERGIC3-217ENST00000488935 PRPF40AO75400 957 aaKnown RBP17.13■□□□□ 0.33
ERGIC3-217ENST00000488935 KRT19P08727 400 aa17.13■□□□□ 0.33
ERGIC3-217ENST00000488935 HMGA1P17096 107 aaKnown RBP17.13■□□□□ 0.33
ERGIC3-217ENST00000488935 CYP2F1P24903 491 aa17.13■□□□□ 0.33
ERGIC3-217ENST00000488935 TUFMP49411 452 aaKnown RBP17.13■□□□□ 0.33
ERGIC3-217ENST00000488935 CCR3P51677 355 aa17.13■□□□□ 0.33
ERGIC3-217ENST00000488935 ATXN1P54253 815 aaKnown RBP17.13■□□□□ 0.33
ERGIC3-217ENST00000488935 VEPH1Q14D04 833 aa17.13■□□□□ 0.33
ERGIC3-217ENST00000488935 L1TD1Q5T7N2 865 aaKnown RBP17.13■□□□□ 0.33
ERGIC3-217ENST00000488935 SYCP3Q8IZU3 236 aa17.13■□□□□ 0.33
ERGIC3-217ENST00000488935 PDCL2Q8N4E4 241 aa17.13■□□□□ 0.33
ERGIC3-217ENST00000488935 CSGALNACT2Q8N6G5 542 aa17.13■□□□□ 0.33
ERGIC3-217ENST00000488935 BPIFB1Q8TDL5 484 aa17.13■□□□□ 0.33
ERGIC3-217ENST00000488935 E2F7Q96AV8 911 aa17.13■□□□□ 0.33
ERGIC3-217ENST00000488935 DLL3Q9NYJ7 618 aa17.13■□□□□ 0.33
ERGIC3-217ENST00000488935 DSEQ9UL01 958 aa17.13■□□□□ 0.33
ERGIC3-217ENST00000488935 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.13■□□□□ 0.33
ERGIC3-217ENST00000488935 NCOR2Q9Y618 2525 aa17.12■□□□□ 0.33
ERGIC3-217ENST00000488935 K7ESF4 209 aa17.12■□□□□ 0.33
ERGIC3-217ENST00000488935 EXTL3O43909 919 aa17.12■□□□□ 0.33
ERGIC3-217ENST00000488935 F11P03951 625 aa17.12■□□□□ 0.33
ERGIC3-217ENST00000488935 ARSAP15289 507 aa17.12■□□□□ 0.33
ERGIC3-217ENST00000488935 SV2CQ496J9 727 aa17.12■□□□□ 0.33
ERGIC3-217ENST00000488935 ARHGAP29Q52LW3 1261 aa17.12■□□□□ 0.33
ERGIC3-217ENST00000488935 FOXD4L5Q5VV16 416 aaPredicted RBP17.12■□□□□ 0.33
ERGIC3-217ENST00000488935 FOXD4L4Q8WXT5 416 aaPredicted RBP17.12■□□□□ 0.33
ERGIC3-217ENST00000488935 USP13Q92995 863 aaPredicted RBP17.12■□□□□ 0.33
ERGIC3-217ENST00000488935 EBF3Q9H4W6 596 aa17.12■□□□□ 0.33
ERGIC3-217ENST00000488935 C8orf33Q9H7E9 229 aaPredicted RBP17.12■□□□□ 0.33
ERGIC3-217ENST00000488935 HPS4Q9NQG7 708 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms