RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 CD6P30203 668 aa4.98□□□□□ -1.61
SSR1-209ENST00000488834 SLC7A1P30825 629 aa4.98□□□□□ -1.61
SSR1-209ENST00000488834 GCLCP48506 637 aaPredicted RBP4.98□□□□□ -1.61
SSR1-209ENST00000488834 AGFG1P52594 562 aaKnown RBP4.98□□□□□ -1.61
SSR1-209ENST00000488834 SEC24CP53992 1094 aa4.98□□□□□ -1.61
SSR1-209ENST00000488834 CACNB3P54284 484 aa4.98□□□□□ -1.61
SSR1-209ENST00000488834 MRPS35P82673 323 aaKnown RBP4.98□□□□□ -1.61
SSR1-209ENST00000488834 LONRF3Q496Y0 759 aa4.98□□□□□ -1.61
SSR1-209ENST00000488834 LMBRD2Q68DH5 695 aaPredicted RBP4.98□□□□□ -1.61
SSR1-209ENST00000488834 MAEAQ7L5Y9 396 aa4.98□□□□□ -1.61
SSR1-209ENST00000488834 FAM9AQ8IZU1 332 aaPredicted RBP4.98□□□□□ -1.61
SSR1-209ENST00000488834 MPP5Q8N3R9 675 aa4.98□□□□□ -1.61
SSR1-209ENST00000488834 SLC30A5Q8TAD4 765 aa4.98□□□□□ -1.61
SSR1-209ENST00000488834 POC1BQ8TC44 478 aa4.98□□□□□ -1.61
SSR1-209ENST00000488834 LRIG1Q96JA1 1093 aa4.98□□□□□ -1.61
SSR1-209ENST00000488834 SLC46A1Q96NT5 459 aa4.98□□□□□ -1.61
SSR1-209ENST00000488834 HEPHQ9BQS7 1158 aa4.98□□□□□ -1.61
SSR1-209ENST00000488834 IKZF4Q9H2S9 585 aa4.98□□□□□ -1.61
SSR1-209ENST00000488834 TOR3AQ9H497 397 aa4.98□□□□□ -1.61
SSR1-209ENST00000488834 MRPS18AQ9NVS2 196 aaKnown RBP4.98□□□□□ -1.61
SSR1-209ENST00000488834 ETAA1Q9NY74 926 aa4.98□□□□□ -1.61
SSR1-209ENST00000488834 VSX1Q9NZR4 365 aaPredicted RBP4.98□□□□□ -1.61
SSR1-209ENST00000488834 CHPF2Q9P2E5 772 aa4.98□□□□□ -1.61
SSR1-209ENST00000488834 DDX20Q9UHI6 824 aaKnown RBP4.98□□□□□ -1.61
SSR1-209ENST00000488834 TMX2Q9Y320 296 aa4.98□□□□□ -1.61
SSR1-209ENST00000488834 TBC1D4O60343 1298 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 MGEA5O60502 916 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 PARNO95453 639 aaKnown RBP4.97□□□□□ -1.61
SSR1-209ENST00000488834 ESRRBO95718 433 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 THP07101 528 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 NPR1P16066 1061 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 PPP3CBP16298 524 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 KRT4P19013 534 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 CXCR5P32302 372 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 ITIH3Q06033 890 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 SCAPQ12770 1279 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 GRM3Q14832 879 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 IQCB1Q15051 598 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 CNN3Q15417 329 aaKnown RBP4.97□□□□□ -1.61
SSR1-209ENST00000488834 KIAA0753Q2KHM9 967 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 DARS2Q6PI48 645 aaKnown RBP4.97□□□□□ -1.61
SSR1-209ENST00000488834 TMEM108Q6UXF1 575 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 TSHZ1Q6ZSZ6 1077 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 SRGAP1Q7Z6B7 1085 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 LNX2Q8N448 690 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 ACTRT2Q8TDY3 377 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 LINC00476Q8WZB0 136 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 SLC9A6Q92581 669 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 FUBP1Q96AE4 644 aaKnown RBP4.97□□□□□ -1.61
SSR1-209ENST00000488834 MRGPRX1Q96LB2 322 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 KRTAP17-1Q9BYP8 105 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 OBP2AQ9NY56 170 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.97□□□□□ -1.61
SSR1-209ENST00000488834 HESX1Q9UBX0 185 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 TPCN1Q9ULQ1 816 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 MED16Q9Y2X0 877 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.97□□□□□ -1.61
SSR1-209ENST00000488834 DMRT1Q9Y5R6 373 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 MAST3O60307 1309 aa4.97□□□□□ -1.61
SSR1-209ENST00000488834 DNAJB5O75953 348 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 CHRM2P08172 466 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 ATXN1LP0C7T5 689 aaKnown RBP4.96□□□□□ -1.62
SSR1-209ENST00000488834 SRGNP10124 158 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 BRAFP15056 766 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 PXNP49023 591 aaPredicted RBP4.96□□□□□ -1.62
SSR1-209ENST00000488834 UCP3P55916 312 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 SLC13A2Q13183 592 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 RAB32Q13637 225 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 RBM20Q5T481 1227 aaKnown RBP4.96□□□□□ -1.62
SSR1-209ENST00000488834 RNF220Q5VTB9 566 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 Q6ZPA2 131 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 PPP1R32Q7Z5V6 425 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 KIAA0319LQ8IZA0 1049 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 SLC15A4Q8N697 577 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 FAM156AQ8NDB6 213 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 KBTBD7Q8WVZ9 684 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 LPIN2Q92539 896 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 ACTRT3Q9BYD9 372 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 ZSCAN32Q9NX65 697 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 SYBUQ9NX95 663 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 XPR1Q9UBH6 696 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 L1RE1Q9UN81 338 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 SHOC2Q9UQ13 582 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 EPN1Q9Y6I3 576 aaPredicted RBP4.96□□□□□ -1.62
SSR1-209ENST00000488834 SPATA31A3Q5VYP0 1347 aa4.96□□□□□ -1.62
SSR1-209ENST00000488834 BTN3A1O00481 513 aa4.95□□□□□ -1.62
SSR1-209ENST00000488834 XRCC6P12956 609 aaKnown RBP eCLIP4.95□□□□□ -1.62
SSR1-209ENST00000488834 PLA2G5P39877 138 aa4.95□□□□□ -1.62
SSR1-209ENST00000488834 SLC11A2P49281 568 aa4.95□□□□□ -1.62
SSR1-209ENST00000488834 NXPH1P58417 271 aa4.95□□□□□ -1.62
SSR1-209ENST00000488834 LILRA4P59901 499 aa4.95□□□□□ -1.62
SSR1-209ENST00000488834 FAM193AP78312 1265 aa4.95□□□□□ -1.62
SSR1-209ENST00000488834 KRT17Q04695 432 aa4.95□□□□□ -1.62
SSR1-209ENST00000488834 TCF15Q12870 199 aa4.95□□□□□ -1.62
SSR1-209ENST00000488834 GBX1Q14549 363 aa4.95□□□□□ -1.62
SSR1-209ENST00000488834 KAZNQ674X7 775 aa4.95□□□□□ -1.62
SSR1-209ENST00000488834 VWA1Q6PCB0 445 aa4.95□□□□□ -1.62
SSR1-209ENST00000488834 CCAR1Q8IX12 1150 aaKnown RBP4.95□□□□□ -1.62
SSR1-209ENST00000488834 DNAJC5GQ8N7S2 189 aa4.95□□□□□ -1.62
SSR1-209ENST00000488834 IL31RAQ8NI17 732 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms