RNA–Protein interactions for RNA: ENST00000488758.1

APOBEC3A-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 2

Gene APOBEC3A, Length 344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-203ENST00000488758 CYP27A1Q02318 531 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 GFPT1Q06210 699 aaPredicted RBP8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 SOWAHAQ2M3V2 549 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 ASTE1Q2TB18 679 aaPredicted RBP8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 CCDC122Q5T0U0 273 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 SPOUT1Q5T280 376 aaKnown RBP8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 C10orf76Q5T2E6 689 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 TAF3Q5VWG9 929 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 OTOP2Q7RTS6 562 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 UNC93AQ86WB7 457 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 METTL23Q86XA0 190 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 ZNF677Q86XU0 584 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 ZNF280BQ86YH2 543 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 GLYCTKQ8IVS8 523 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 COLGALT2Q8IYK4 626 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 CCAR2Q8N163 923 aaKnown RBP8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 C17orf53Q8N3J3 647 aaPredicted RBP8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 TOP6BLQ8N6T0 577 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 UBR7Q8N806 425 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 ACRBPQ8NEB7 543 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 EPS8L1Q8TE68 723 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 ZNF606Q8WXB4 792 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 RABGGTAQ92696 567 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 TOP1MTQ969P6 601 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 TMEM176AQ96HP8 235 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 LRCH3Q96II8 777 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 SENP8Q96LD8 212 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 HEXIM2Q96MH2 286 aaKnown RBP8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 LBHD1Q9BQE6 289 aaPredicted RBP8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 MRPL45Q9BRJ2 306 aaKnown RBP8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 COLEC11Q9BWP8 271 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 NT5C1AQ9BXI3 368 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 NRDE2Q9H7Z3 1164 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 TBC1D13Q9NVG8 400 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 CACNG4Q9UBN1 327 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 KIAA1257Q9ULG3 409 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 BARX2Q9UMQ3 279 aaPredicted RBP8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 PCDHA13Q9Y5I0 950 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 TTC3P53804 2025 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 CEP290O15078 2479 aa8.06□□□□□ -1.12
APOBEC3A-203ENST00000488758 SCN1AP35498 2009 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 GOLGA6L9A6NEM1 432 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 TRAPPC3O43617 180 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 DGKIO75912 1065 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 LCA5LO95447 670 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 MMEP08473 750 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 PDGFRBP09619 1106 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 VDRP11473 427 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 SYN1P17600 705 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 WARSP23381 471 aaKnown RBP8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 LHX1P48742 406 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 GATMP50440 423 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 RAD23BP54727 409 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 WDR5P61964 334 aaKnown RBP8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 DSC1Q08554 894 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 INCA1Q0VD86 236 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 KIF5AQ12840 1032 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 PAN2Q504Q3 1202 aaKnown RBP8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 TIGD5Q53EQ6 642 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 FAM117BQ6P1L5 589 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 ALKBH5Q6P6C2 394 aaKnown RBP8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 TRIM72Q6ZMU5 477 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 ZNF365Q70YC5 407 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 NOP9Q86U38 636 aaKnown RBP8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 ADGRF2Q8IZF7 708 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 CRIPAKQ8N1N5 446 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 TMEM86AQ8N2M4 240 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 LRRC43Q8N309 656 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 PDCL2Q8N4E4 241 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 SLC30A5Q8TAD4 765 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 LNX1Q8TBB1 728 aaPredicted RBP8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 SLC20A1Q8WUM9 679 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 VWCEQ96DN2 955 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 PAAF1Q9BRP4 392 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 TMEM175Q9BSA9 504 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 ELOVL4Q9GZR5 314 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 ACP6Q9NPH0 428 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 KCND1Q9NSA2 647 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 NAGPAQ9UK23 515 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 NOCTQ9UK39 431 aaKnown RBP8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 DSEQ9UL01 958 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 ZMYND8Q9ULU4 1186 aaPredicted RBP8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 L1RE1Q9UN81 338 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 FAN1Q9Y2M0 1017 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 PRG3Q9Y2Y8 225 aaPredicted RBP8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 ALPK3Q96L96 1907 aa8.05□□□□□ -1.12
APOBEC3A-203ENST00000488758 BRCA2P51587 3418 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 MICAL3Q7RTP6 2002 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 TMCO5BA8MYB1 307 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 TMEM189-UBE2V1I3L0A0 370 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 NRP1O14786 923 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 KRT86O43790 486 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 RTN2O75298 545 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 CALCAP01258 141 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 H2AFZP0C0S5 128 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 ODC1P11926 461 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 GZMAP12544 262 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 CHRNB2P17787 502 aa8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 BRD2P25440 801 aaKnown RBP8.04□□□□□ -1.12
APOBEC3A-203ENST00000488758 BRCC3P46736 316 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms