RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 DCP1BQ8IZD4 617 aaKnown RBP11.76□□□□□ -0.53
HDLBP-242ENST00000488013 KAT5Q92993 513 aa11.76□□□□□ -0.53
HDLBP-242ENST00000488013 HEXIM2Q96MH2 286 aaKnown RBP11.76□□□□□ -0.53
HDLBP-242ENST00000488013 MRPL45Q9BRJ2 306 aaKnown RBP11.76□□□□□ -0.53
HDLBP-242ENST00000488013 DDX43Q9NXZ2 648 aaKnown RBP11.76□□□□□ -0.53
HDLBP-242ENST00000488013 MAFFQ9ULX9 164 aa11.76□□□□□ -0.53
HDLBP-242ENST00000488013 BACE2Q9Y5Z0 518 aa11.76□□□□□ -0.53
HDLBP-242ENST00000488013 COL4A6Q14031 1691 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 B4GALT3O60512 393 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 FGF18O76093 207 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 LSM8O95777 96 aaKnown RBP11.75□□□□□ -0.53
HDLBP-242ENST00000488013 EFEMP2O95967 443 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 URODP06132 367 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 CD19P15391 556 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 GNA15P30679 374 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 BRCC3P46736 316 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 RAD23BP54727 409 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 CDH8P55286 799 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 CDR2Q01850 454 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 ARID5AQ03989 594 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 SPA17Q15506 151 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 CNGA2Q16280 664 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 SGO2Q562F6 1265 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 C10orf76Q5T2E6 689 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 TMCO2Q7Z6W1 182 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-242ENST00000488013 RNF168Q8IYW5 571 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-242ENST00000488013 HASPINQ8TF76 798 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 C2orf15Q8WU43 125 aaKnown RBP11.75□□□□□ -0.53
HDLBP-242ENST00000488013 KBTBD7Q8WVZ9 684 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 PIK3R5Q8WYR1 880 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 NOX5Q96PH1 765 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 TGS1Q96RS0 853 aaKnown RBP11.75□□□□□ -0.53
HDLBP-242ENST00000488013 HERC2P3Q9BVR0 1158 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 ZNF518BQ9C0D4 1074 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 MIS12Q9H081 205 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 SDCBP2Q9H190 292 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 PDCL3Q9H2J4 239 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 CHST7Q9NS84 486 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 HESX1Q9UBX0 185 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 ATP8B3O60423 1300 aa11.75□□□□□ -0.53
HDLBP-242ENST00000488013 TET1Q8NFU7 2136 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 LINC01553A4QN01 128 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 RNF225M0QZC1 329 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-242ENST00000488013 AKR1B10O60218 316 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 LPXNO60711 386 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 C1RP00736 705 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 ITGB1P05556 798 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 SKILP12757 684 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 TNFAIP3P21580 790 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 CTNNB1P35222 781 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 CLCN1P35523 988 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 RAP1GAPP47736 663 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 GLUD2P49448 558 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 KRT83P78385 493 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 SMAD3P84022 425 aaKnown RBP11.74□□□□□ -0.53
HDLBP-242ENST00000488013 DSG1Q02413 1049 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 MRPL58Q14197 206 aaKnown RBP11.74□□□□□ -0.53
HDLBP-242ENST00000488013 CTXN3Q4LDR2 81 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 VARS2Q5ST30 1063 aaKnown RBP11.74□□□□□ -0.53
HDLBP-242ENST00000488013 HGSNATQ68CP4 663 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 ARHGAP17Q68EM7 881 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 SCARA3Q6AZY7 606 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 C4orf50Q6ZRC1 276 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 SLC47A2Q86VL8 602 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 CEP57Q86XR8 500 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 SLC4A11Q8NBS3 891 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 B3GALNT2Q8NCR0 500 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 MSANTD4Q8NCY6 345 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 MYCBPAPQ8TBZ2 947 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 EPS8L1Q8TE68 723 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 WHAMMQ8TF30 809 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 ZNF606Q8WXB4 792 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 RABGGTAQ92696 567 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 AGPAT1Q99943 283 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 SYT15Q9BQS2 421 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 GPR62Q9BZJ7 368 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 LHX5Q9H2C1 402 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 HAUS4Q9H6D7 363 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 NHEJ1Q9H9Q4 299 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-242ENST00000488013 NGRNQ9NPE2 291 aaKnown RBP11.74□□□□□ -0.53
HDLBP-242ENST00000488013 MRPL17Q9NRX2 175 aaKnown RBP11.74□□□□□ -0.53
HDLBP-242ENST00000488013 AJAP1Q9UKB5 411 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-242ENST00000488013 PCDHGC3Q9UN70 934 aa11.74□□□□□ -0.53
HDLBP-242ENST00000488013 NT5C1B-RDH14C9J2C7 533 aa11.73□□□□□ -0.53
HDLBP-242ENST00000488013 CCP110O43303 1012 aa11.73□□□□□ -0.53
HDLBP-242ENST00000488013 THAP12O43422 761 aa11.73□□□□□ -0.53
HDLBP-242ENST00000488013 PDGFRBP09619 1106 aa11.73□□□□□ -0.53
HDLBP-242ENST00000488013 SETSIPP0DME0 302 aa11.73□□□□□ -0.53
HDLBP-242ENST00000488013 GZMAP12544 262 aa11.73□□□□□ -0.53
HDLBP-242ENST00000488013 PTPN1P18031 435 aaKnown RBP11.73□□□□□ -0.53
HDLBP-242ENST00000488013 TKTP29401 623 aaKnown RBP11.73□□□□□ -0.53
HDLBP-242ENST00000488013 ERVK-21P61565 698 aa11.73□□□□□ -0.53
HDLBP-242ENST00000488013 SLC18A3Q16572 532 aa11.73□□□□□ -0.53
HDLBP-242ENST00000488013 ZNF394Q53GI3 561 aa11.73□□□□□ -0.53
HDLBP-242ENST00000488013 INTS6LQ5JSJ4 861 aaKnown RBP11.73□□□□□ -0.53
HDLBP-242ENST00000488013 WDR59Q6PJI9 974 aa11.73□□□□□ -0.53
HDLBP-242ENST00000488013 LCLAT1Q6UWP7 414 aa11.73□□□□□ -0.53
HDLBP-242ENST00000488013 VPS52Q8N1B4 723 aa11.73□□□□□ -0.53
HDLBP-242ENST00000488013 TMEM35BQ8NCS4 154 aa11.73□□□□□ -0.53
HDLBP-242ENST00000488013 SLC39A7Q92504 469 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms