RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 ECE2O60344 883 aa5.96□□□□□ -1.46
BRCA1-217ENST00000487825 ULK1O75385 1050 aa5.96□□□□□ -1.46
BRCA1-217ENST00000487825 ITGA10O75578 1167 aa5.96□□□□□ -1.46
BRCA1-217ENST00000487825 BBOX1O75936 387 aa5.96□□□□□ -1.46
BRCA1-217ENST00000487825 RECQL4O94761 1208 aa5.96□□□□□ -1.46
BRCA1-217ENST00000487825 NTSR2O95665 410 aa5.96□□□□□ -1.46
BRCA1-217ENST00000487825 GJB1P08034 283 aa5.96□□□□□ -1.46
BRCA1-217ENST00000487825 VIL1P09327 827 aaKnown RBP5.96□□□□□ -1.46
BRCA1-217ENST00000487825 NR4A1P22736 598 aa5.96□□□□□ -1.46
BRCA1-217ENST00000487825 CTSSP25774 331 aa5.96□□□□□ -1.46
BRCA1-217ENST00000487825 APOBEC3AP31941 199 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-217ENST00000487825 NF2P35240 595 aa5.96□□□□□ -1.46
BRCA1-217ENST00000487825 CCT2P78371 535 aaKnown RBP5.96□□□□□ -1.46
BRCA1-217ENST00000487825 CDK17Q00537 523 aa5.96□□□□□ -1.46
BRCA1-217ENST00000487825 FSCN1Q16658 493 aaKnown RBP5.96□□□□□ -1.46
BRCA1-217ENST00000487825 MTHFSDQ2M296 383 aaKnown RBP5.96□□□□□ -1.46
BRCA1-217ENST00000487825 OTUD7BQ6GQQ9 843 aa5.96□□□□□ -1.46
BRCA1-217ENST00000487825 ARMC9Q7Z3E5 817 aa5.96□□□□□ -1.46
BRCA1-217ENST00000487825 MDM1Q8TC05 714 aa5.96□□□□□ -1.46
BRCA1-217ENST00000487825 TGFBRAP1Q8WUH2 860 aa5.96□□□□□ -1.46
BRCA1-217ENST00000487825 SNX33Q8WV41 574 aa5.96□□□□□ -1.46
BRCA1-217ENST00000487825 PDCD2LQ9BRP1 358 aa5.96□□□□□ -1.46
BRCA1-217ENST00000487825 TTPALQ9BTX7 342 aa5.96□□□□□ -1.46
BRCA1-217ENST00000487825 ZNF768Q9H5H4 540 aaKnown RBP5.96□□□□□ -1.46
BRCA1-217ENST00000487825 CAAP1Q9H8G2 361 aa5.96□□□□□ -1.46
BRCA1-217ENST00000487825 C11orf21Q9P2W6 132 aa5.96□□□□□ -1.46
BRCA1-217ENST00000487825 SCAF8Q9UPN6 1271 aaKnown RBP5.96□□□□□ -1.46
BRCA1-217ENST00000487825 APOBEC2Q9Y235 224 aaKnown RBP5.96□□□□□ -1.46
BRCA1-217ENST00000487825 TMA7Q9Y2S6 64 aaKnown RBP5.96□□□□□ -1.46
BRCA1-217ENST00000487825 COL1A1P02452 1464 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-217ENST00000487825 DNAH12Q6ZR08 3092 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 MUC6Q6W4X9 2439 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 PRR5-ARHGAP8B1AHC4 643 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 OVOL3O00110 214 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 KRT4P19013 534 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 ENPP1P22413 925 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 HSD3B2P26439 372 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 SOX5P35711 763 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 TEFQ10587 303 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.95□□□□□ -1.46
BRCA1-217ENST00000487825 C19orf54Q5BKX5 351 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 SUSD4Q5VX71 490 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 ANKS6Q68DC2 871 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 SDE2Q6IQ49 451 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 Q6ZPA2 131 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 DOK3Q7L591 496 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 MRGPRGQ86SM5 289 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 ULK2Q8IYT8 1036 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 LILRA3Q8N6C8 439 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-217ENST00000487825 MAFAQ8NHW3 353 aaPredicted RBP5.95□□□□□ -1.46
BRCA1-217ENST00000487825 CHAC2Q8WUX2 184 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 ACAP3Q96P50 834 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 SIN3AQ96ST3 1273 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 NDC1Q9BTX1 674 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 MLST8Q9BVC4 326 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 KCNH6Q9H252 994 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 MYOZ2Q9NPC6 264 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 LTBP2Q14767 1821 aa5.95□□□□□ -1.46
BRCA1-217ENST00000487825 CEMIPQ8WUJ3 1361 aa5.94□□□□□ -1.46
BRCA1-217ENST00000487825 MAST2Q6P0Q8 1798 aa5.94□□□□□ -1.46
BRCA1-217ENST00000487825 GOLGA8AA7E2F4 631 aa5.94□□□□□ -1.46
BRCA1-217ENST00000487825 AHRRA9YTQ3 701 aa5.94□□□□□ -1.46
BRCA1-217ENST00000487825 ERVV-1B6SEH8 477 aa5.94□□□□□ -1.46
BRCA1-217ENST00000487825 LEFTY2O00292 366 aa5.94□□□□□ -1.46
BRCA1-217ENST00000487825 KCNQ3O43525 872 aa5.94□□□□□ -1.46
BRCA1-217ENST00000487825 RAMP2O60895 175 aa5.94□□□□□ -1.46
BRCA1-217ENST00000487825 MASP1P48740 699 aa5.94□□□□□ -1.46
BRCA1-217ENST00000487825 PRMT2P55345 433 aa5.94□□□□□ -1.46
BRCA1-217ENST00000487825 SCAND1P57086 179 aa5.94□□□□□ -1.46
BRCA1-217ENST00000487825 MEF2AQ02078 507 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-217ENST00000487825 CT47A1Q5JQC4 288 aaPredicted RBP5.94□□□□□ -1.46
BRCA1-217ENST00000487825 METTL24Q5JXM2 366 aa5.94□□□□□ -1.46
BRCA1-217ENST00000487825 LAIR1Q6GTX8 287 aa5.94□□□□□ -1.46
BRCA1-217ENST00000487825 VRK3Q8IV63 474 aa5.94□□□□□ -1.46
BRCA1-217ENST00000487825 RPUSD2Q8IZ73 545 aaKnown RBP5.94□□□□□ -1.46
BRCA1-217ENST00000487825 AGBL3Q8NEM8 1001 aa5.94□□□□□ -1.46
BRCA1-217ENST00000487825 PROKR1Q8TCW9 393 aa5.94□□□□□ -1.46
BRCA1-217ENST00000487825 LENG9Q96B70 501 aa5.94□□□□□ -1.46
BRCA1-217ENST00000487825 QRSL1Q9H0R6 528 aaKnown RBP5.94□□□□□ -1.46
BRCA1-217ENST00000487825 VTA1Q9NP79 307 aa5.94□□□□□ -1.46
BRCA1-217ENST00000487825 TRPM5Q9NZQ8 1165 aa5.94□□□□□ -1.46
BRCA1-217ENST00000487825 MAP3K15Q6ZN16 1313 aa5.94□□□□□ -1.46
BRCA1-217ENST00000487825 DOCK3Q8IZD9 2030 aa5.93□□□□□ -1.46
BRCA1-217ENST00000487825 TRIM24O15164 1050 aa5.93□□□□□ -1.46
BRCA1-217ENST00000487825 ADCY6O43306 1168 aa5.93□□□□□ -1.46
BRCA1-217ENST00000487825 SNRPA1P09661 255 aaKnown RBP5.93□□□□□ -1.46
BRCA1-217ENST00000487825 CCL5P13501 91 aa5.93□□□□□ -1.46
BRCA1-217ENST00000487825 GPTP24298 496 aa5.93□□□□□ -1.46
BRCA1-217ENST00000487825 ADSLP30566 484 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-217ENST00000487825 FAM189BP81408 668 aa5.93□□□□□ -1.46
BRCA1-217ENST00000487825 GRAPQ13588 217 aa5.93□□□□□ -1.46
BRCA1-217ENST00000487825 CSRP2Q16527 193 aa5.93□□□□□ -1.46
BRCA1-217ENST00000487825 SLC10A5Q5PT55 438 aa5.93□□□□□ -1.46
BRCA1-217ENST00000487825 IQSEC1Q6DN90 963 aa5.93□□□□□ -1.46
BRCA1-217ENST00000487825 GPRIN1Q7Z2K8 1008 aa5.93□□□□□ -1.46
BRCA1-217ENST00000487825 IL17REQ8NFR9 667 aa5.93□□□□□ -1.46
BRCA1-217ENST00000487825 GRAPLQ8TC17 118 aaPredicted RBP5.93□□□□□ -1.46
BRCA1-217ENST00000487825 U2AF1L4Q8WU68 220 aaKnown RBP5.93□□□□□ -1.46
BRCA1-217ENST00000487825 CEP95Q96GE4 821 aa5.93□□□□□ -1.46
BRCA1-217ENST00000487825 RAX2Q96IS3 184 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms