RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 ZNF185O15231 689 aa15.1■□□□□ 0.01
CUX1-209ENST00000487284 INPPL1O15357 1258 aa15.1■□□□□ 0.01
CUX1-209ENST00000487284 BUB1BO60566 1050 aaPredicted RBP15.1■□□□□ 0.01
CUX1-209ENST00000487284 BAIAP3O94812 1187 aa15.1■□□□□ 0.01
CUX1-209ENST00000487284 THP07101 528 aa15.1■□□□□ 0.01
CUX1-209ENST00000487284 CTAGE8P0CG41 777 aa15.1■□□□□ 0.01
CUX1-209ENST00000487284 P4HA1P13674 534 aa15.1■□□□□ 0.01
CUX1-209ENST00000487284 TUBB4BP68371 445 aa15.1■□□□□ 0.01
CUX1-209ENST00000487284 ELF2Q15723 593 aa15.1■□□□□ 0.01
CUX1-209ENST00000487284 PPP1R2P3Q6NXS1 205 aa15.1■□□□□ 0.01
CUX1-209ENST00000487284 ZNF572Q7Z3I7 529 aaPredicted RBP15.1■□□□□ 0.01
CUX1-209ENST00000487284 CTAGE6Q86UF2 777 aa15.1■□□□□ 0.01
CUX1-209ENST00000487284 CREG2Q8IUH2 290 aa15.1■□□□□ 0.01
CUX1-209ENST00000487284 CTAGE4Q8IX94 777 aa15.1■□□□□ 0.01
CUX1-209ENST00000487284 COG1Q8WTW3 980 aa15.1■□□□□ 0.01
CUX1-209ENST00000487284 ZNF606Q8WXB4 792 aa15.1■□□□□ 0.01
CUX1-209ENST00000487284 TRIM11Q96F44 468 aa15.1■□□□□ 0.01
CUX1-209ENST00000487284 RPGRIP1Q96KN7 1286 aa15.1■□□□□ 0.01
CUX1-209ENST00000487284 LBHD1Q9BQE6 289 aaPredicted RBP15.1■□□□□ 0.01
CUX1-209ENST00000487284 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.1■□□□□ 0.01
CUX1-209ENST00000487284 SDCBP2Q9H190 292 aa15.1■□□□□ 0.01
CUX1-209ENST00000487284 AVENQ9NQS1 362 aaPredicted RBP15.1■□□□□ 0.01
CUX1-209ENST00000487284 CACNG4Q9UBN1 327 aa15.1■□□□□ 0.01
CUX1-209ENST00000487284 COL4A6Q14031 1691 aa15.09■□□□□ 0.01
CUX1-209ENST00000487284 PPEF2O14830 753 aa15.09■□□□□ 0.01
CUX1-209ENST00000487284 XPOTO43592 962 aaKnown RBP15.09■□□□□ 0.01
CUX1-209ENST00000487284 EFCAB14O75071 495 aa15.09■□□□□ 0.01
CUX1-209ENST00000487284 KIF4AO95239 1232 aa15.09■□□□□ 0.01
CUX1-209ENST00000487284 FGBP02675 491 aa15.09■□□□□ 0.01
CUX1-209ENST00000487284 GRIK3Q13003 919 aa15.09■□□□□ 0.01
CUX1-209ENST00000487284 NOMO2Q5JPE7 1267 aa15.09■□□□□ 0.01
CUX1-209ENST00000487284 TMEM240Q5SV17 173 aa15.09■□□□□ 0.01
CUX1-209ENST00000487284 C11orf63Q6NUN7 778 aa15.09■□□□□ 0.01
CUX1-209ENST00000487284 PSRC1Q6PGN9 363 aaPredicted RBP15.09■□□□□ 0.01
CUX1-209ENST00000487284 TMCO2Q7Z6W1 182 aaPredicted RBP15.09■□□□□ 0.01
CUX1-209ENST00000487284 DAAM2Q86T65 1068 aa15.09■□□□□ 0.01
CUX1-209ENST00000487284 NT5DC3Q86UY8 548 aa15.09■□□□□ 0.01
CUX1-209ENST00000487284 MCOLN2Q8IZK6 566 aa15.09■□□□□ 0.01
CUX1-209ENST00000487284 LRRC52Q8N7C0 313 aa15.09■□□□□ 0.01
CUX1-209ENST00000487284 RABGGTAQ92696 567 aa15.09■□□□□ 0.01
CUX1-209ENST00000487284 ZNF653Q96CK0 615 aa15.09■□□□□ 0.01
CUX1-209ENST00000487284 MMS19Q96T76 1030 aa15.09■□□□□ 0.01
CUX1-209ENST00000487284 GOLPH3Q9H4A6 298 aa15.09■□□□□ 0.01
CUX1-209ENST00000487284 SMYD3Q9H7B4 428 aa15.09■□□□□ 0.01
CUX1-209ENST00000487284 SLC38A7Q9NVC3 462 aa15.09■□□□□ 0.01
CUX1-209ENST00000487284 CTTNBP2NLQ9P2B4 639 aa15.09■□□□□ 0.01
CUX1-209ENST00000487284 ZBBXA8MT70 800 aa15.08■□□□□ 0
CUX1-209ENST00000487284 PDE2AO00408 941 aaPredicted RBP15.08■□□□□ 0
CUX1-209ENST00000487284 CES2O00748 559 aa15.08■□□□□ 0
CUX1-209ENST00000487284 B4GALT3O60512 393 aa15.08■□□□□ 0
CUX1-209ENST00000487284 CILPO75339 1184 aa15.08■□□□□ 0
CUX1-209ENST00000487284 LSM8O95777 96 aaKnown RBP15.08■□□□□ 0
CUX1-209ENST00000487284 AMHP03971 560 aa15.08■□□□□ 0
CUX1-209ENST00000487284 CFHP08603 1231 aa15.08■□□□□ 0
CUX1-209ENST00000487284 PAEPP09466 180 aa15.08■□□□□ 0
CUX1-209ENST00000487284 MYBL1P10243 752 aa15.08■□□□□ 0
CUX1-209ENST00000487284 CYP3A5P20815 502 aa15.08■□□□□ 0
CUX1-209ENST00000487284 NSFP46459 744 aaKnown RBP15.08■□□□□ 0
CUX1-209ENST00000487284 RAP1GAPP47736 663 aa15.08■□□□□ 0
CUX1-209ENST00000487284 ITIH3Q06033 890 aa15.08■□□□□ 0
CUX1-209ENST00000487284 INCA1Q0VD86 236 aa15.08■□□□□ 0
CUX1-209ENST00000487284 RPS6KA1Q15418 735 aa15.08■□□□□ 0
CUX1-209ENST00000487284 TEX35Q5T0J7 233 aa15.08■□□□□ 0
CUX1-209ENST00000487284 NAA35Q5VZE5 725 aa15.08■□□□□ 0
CUX1-209ENST00000487284 MON1BQ7L1V2 547 aa15.08■□□□□ 0
CUX1-209ENST00000487284 PEX26Q7Z412 305 aa15.08■□□□□ 0
CUX1-209ENST00000487284 PHF13Q86YI8 300 aaPredicted RBP15.08■□□□□ 0
CUX1-209ENST00000487284 ABI1Q8IZP0 508 aa15.08■□□□□ 0
CUX1-209ENST00000487284 TTC39CQ8N584 583 aa15.08■□□□□ 0
CUX1-209ENST00000487284 TOP1MTQ969P6 601 aa15.08■□□□□ 0
CUX1-209ENST00000487284 CYFIP2Q96F07 1278 aa15.08■□□□□ 0
CUX1-209ENST00000487284 VCPIP1Q96JH7 1222 aa15.08■□□□□ 0
CUX1-209ENST00000487284 CAPZA3Q96KX2 299 aa15.08■□□□□ 0
CUX1-209ENST00000487284 CASD1Q96PB1 797 aa15.08■□□□□ 0
CUX1-209ENST00000487284 ZSWIM1Q9BR11 485 aa15.08■□□□□ 0
CUX1-209ENST00000487284 PDCL3Q9H2J4 239 aa15.08■□□□□ 0
CUX1-209ENST00000487284 TBC1D13Q9NVG8 400 aa15.08■□□□□ 0
CUX1-209ENST00000487284 RNF216Q9NWF9 866 aaPredicted RBP15.08■□□□□ 0
CUX1-209ENST00000487284 UVRAGQ9P2Y5 699 aa15.08■□□□□ 0
CUX1-209ENST00000487284 RNF14Q9UBS8 474 aa15.08■□□□□ 0
CUX1-209ENST00000487284 PCDHGC3Q9UN70 934 aa15.08■□□□□ 0
CUX1-209ENST00000487284 NR2E3Q9Y5X4 410 aa15.08■□□□□ 0
CUX1-209ENST00000487284 LAMA2P24043 3122 aaKnown RBP15.08■□□□□ 0
CUX1-209ENST00000487284 FAM170AA1A519 330 aa15.07■□□□□ 0
CUX1-209ENST00000487284 CASTOR2A6NHX0 329 aa15.07■□□□□ 0
CUX1-209ENST00000487284 ATMINO43313 823 aaPredicted RBP15.07■□□□□ 0
CUX1-209ENST00000487284 HOXA2O43364 376 aa15.07■□□□□ 0
CUX1-209ENST00000487284 BRD2P25440 801 aaKnown RBP15.07■□□□□ 0
CUX1-209ENST00000487284 CDH5P33151 784 aaPredicted RBP15.07■□□□□ 0
CUX1-209ENST00000487284 RAD23BP54727 409 aa15.07■□□□□ 0
CUX1-209ENST00000487284 MYO1EQ12965 1108 aa15.07■□□□□ 0
CUX1-209ENST00000487284 C9orf57Q5W0N0 161 aa15.07■□□□□ 0
CUX1-209ENST00000487284 FAM117BQ6P1L5 589 aa15.07■□□□□ 0
CUX1-209ENST00000487284 URGCPQ8TCY9 931 aa15.07■□□□□ 0
CUX1-209ENST00000487284 WHAMMQ8TF30 809 aa15.07■□□□□ 0
CUX1-209ENST00000487284 UBE2Q2Q8WVN8 375 aa15.07■□□□□ 0
CUX1-209ENST00000487284 CPA5Q8WXQ8 436 aa15.07■□□□□ 0
CUX1-209ENST00000487284 TFAP2BQ92481 460 aa15.07■□□□□ 0
CUX1-209ENST00000487284 HES6Q96HZ4 224 aa15.07■□□□□ 0
CUX1-209ENST00000487284 PAAF1Q9BRP4 392 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms