RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 FAM83CQ9BQN1 747 aa21.04■□□□□ 0.96
SMPDL3A-202ENST00000487215 HPS4Q9NQG7 708 aa21.04■□□□□ 0.96
SMPDL3A-202ENST00000487215 GKN1Q9NS71 199 aa21.04■□□□□ 0.96
SMPDL3A-202ENST00000487215 RXFP3Q9NSD7 469 aa21.04■□□□□ 0.96
SMPDL3A-202ENST00000487215 DSEQ9UL01 958 aa21.04■□□□□ 0.96
SMPDL3A-202ENST00000487215 DERAQ9Y315 318 aa21.04■□□□□ 0.96
SMPDL3A-202ENST00000487215 KIF26AQ9ULI4 1882 aaPredicted RBP21.04■□□□□ 0.96
SMPDL3A-202ENST00000487215 CCDC163A0A0D9SF12 145 aa21.03■□□□□ 0.96
SMPDL3A-202ENST00000487215 EPN2O95208 641 aa21.03■□□□□ 0.96
SMPDL3A-202ENST00000487215 SCP2P22307 547 aa21.03■□□□□ 0.96
SMPDL3A-202ENST00000487215 ZNF131P52739 623 aa21.03■□□□□ 0.96
SMPDL3A-202ENST00000487215 PTPAQ15257 358 aa21.03■□□□□ 0.96
SMPDL3A-202ENST00000487215 TAF12Q16514 161 aa21.03■□□□□ 0.96
SMPDL3A-202ENST00000487215 CACNA2D4Q7Z3S7 1137 aa21.03■□□□□ 0.96
SMPDL3A-202ENST00000487215 KBTBD6Q86V97 674 aa21.03■□□□□ 0.96
SMPDL3A-202ENST00000487215 LRRTM3Q86VH5 581 aa21.03■□□□□ 0.96
SMPDL3A-202ENST00000487215 GPBP1Q86WP2 473 aa21.03■□□□□ 0.96
SMPDL3A-202ENST00000487215 CMTM8Q8IZV2 173 aa21.03■□□□□ 0.96
SMPDL3A-202ENST00000487215 MYCT1Q8N699 235 aa21.03■□□□□ 0.96
SMPDL3A-202ENST00000487215 LRRC15Q8TF66 581 aa21.03■□□□□ 0.96
SMPDL3A-202ENST00000487215 C2orf15Q8WU43 125 aaKnown RBP21.03■□□□□ 0.96
SMPDL3A-202ENST00000487215 CCL26Q9Y258 94 aa21.03■□□□□ 0.96
SMPDL3A-202ENST00000487215 RALGAPA1Q6GYQ0 2036 aa21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 OTOL1A6NHN0 477 aaPredicted RBP21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 CYB561D2O14569 222 aa21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 TM4SF5O14894 197 aa21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 FAM13AO94988 1023 aa21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 ZNF806P0C7X5 589 aa21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 HAPLN1P10915 354 aaPredicted RBP21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 RAP1GAPP47736 663 aa21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 GRSF1Q12849 480 aaKnown RBP eCLIP21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 RUNX3Q13761 415 aa21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 DHX8Q14562 1220 aaKnown RBP21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 TRIM68Q6AZZ1 485 aa21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 TMEM150AQ86TG1 271 aa21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 METTL23Q86XA0 190 aa21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 SPPL2BQ8TCT7 592 aa21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 KIF2CQ99661 725 aa21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 PYM1Q9BRP8 204 aaKnown RBP21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 EBF3Q9H4W6 596 aa21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 PARVGQ9HBI0 331 aa21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 ABI2Q9NYB9 513 aaPredicted RBP21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 ZMYM5Q9UJ78 669 aa21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 MAP1BP46821 2468 aaKnown RBP21.02■□□□□ 0.96
SMPDL3A-202ENST00000487215 TRDMT1O14717 391 aaKnown RBP21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 TRAK2O60296 914 aa21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 ATG13O75143 517 aa21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 CCDC192P0DO97 292 aa21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 PMLP29590 882 aa21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 NMT1P30419 496 aaKnown RBP21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 ACOT2P49753 483 aa21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 TAF6P49848 677 aa21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 SMARCB1Q12824 385 aa21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 N4BP2L1Q5TBK1 243 aaPredicted RBP21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 WSCD1Q658N2 575 aa21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 ARL6IP4Q66PJ3 421 aaKnown RBP21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 THEM5Q8N1Q8 247 aa21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 MAB21L3Q8N8X9 362 aa21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 RIN3Q8TB24 985 aa21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 USP13Q92995 863 aaPredicted RBP21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 FIZ1Q96SL8 496 aa21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 ASB7Q9H672 318 aa21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 ANGPTL2Q9UKU9 493 aa21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 SLC8A2Q9UPR5 921 aa21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 C2CD2Q9Y426 696 aa21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 GREB1Q4ZG55 1949 aa21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 CHD8Q9HCK8 2581 aa21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 ANK1P16157 1881 aa21.01■□□□□ 0.95
SMPDL3A-202ENST00000487215 TISP43B9A030 160 aa21■□□□□ 0.95
SMPDL3A-202ENST00000487215 ANKRD63C9JTQ0 380 aa21■□□□□ 0.95
SMPDL3A-202ENST00000487215 EGFP01133 1207 aa21■□□□□ 0.95
SMPDL3A-202ENST00000487215 F11P03951 625 aa21■□□□□ 0.95
SMPDL3A-202ENST00000487215 HMGA1P17096 107 aaKnown RBP21■□□□□ 0.95
SMPDL3A-202ENST00000487215 AVPR1AP37288 418 aa21■□□□□ 0.95
SMPDL3A-202ENST00000487215 NLRP12P59046 1061 aa21■□□□□ 0.95
SMPDL3A-202ENST00000487215 PLA2G2CQ5R387 149 aa21■□□□□ 0.95
SMPDL3A-202ENST00000487215 AK8Q96MA6 479 aa21■□□□□ 0.95
SMPDL3A-202ENST00000487215 CCSER1Q9C0I3 900 aa21■□□□□ 0.95
SMPDL3A-202ENST00000487215 BLOC1S4Q9NUP1 217 aa21■□□□□ 0.95
SMPDL3A-202ENST00000487215 POLR3BQ9NW08 1133 aaPredicted RBP21■□□□□ 0.95
SMPDL3A-202ENST00000487215 SLC26A4O43511 780 aa20.99■□□□□ 0.95
SMPDL3A-202ENST00000487215 RNF40O75150 1001 aa20.99■□□□□ 0.95
SMPDL3A-202ENST00000487215 AKAP3O75969 853 aa20.99■□□□□ 0.95
SMPDL3A-202ENST00000487215 ARSAP15289 507 aa20.99■□□□□ 0.95
SMPDL3A-202ENST00000487215 DDX6P26196 483 aaKnown RBP eCLIP20.99■□□□□ 0.95
SMPDL3A-202ENST00000487215 GTF2BQ00403 316 aa20.99■□□□□ 0.95
SMPDL3A-202ENST00000487215 BFSP1Q12934 665 aa20.99■□□□□ 0.95
SMPDL3A-202ENST00000487215 STPG1Q5TH74 334 aa20.99■□□□□ 0.95
SMPDL3A-202ENST00000487215 ADALQ6DHV7 355 aa20.99■□□□□ 0.95
SMPDL3A-202ENST00000487215 SMOC1Q9H4F8 434 aa20.99■□□□□ 0.95
SMPDL3A-202ENST00000487215 ZHX3Q9H4I2 956 aa20.99■□□□□ 0.95
SMPDL3A-202ENST00000487215 KIF9Q9HAQ2 790 aa20.99■□□□□ 0.95
SMPDL3A-202ENST00000487215 FBRSL1Q9HCM7 1045 aaKnown RBP20.99■□□□□ 0.95
SMPDL3A-202ENST00000487215 TDP1Q9NUW8 608 aa20.99■□□□□ 0.95
SMPDL3A-202ENST00000487215 DPP3Q9NY33 737 aa20.99■□□□□ 0.95
SMPDL3A-202ENST00000487215 KIF3AQ9Y496 699 aa20.99■□□□□ 0.95
SMPDL3A-202ENST00000487215 PCDHGA5Q9Y5G8 931 aa20.99■□□□□ 0.95
SMPDL3A-202ENST00000487215 KRT18P05783 430 aaKnown RBP20.98■□□□□ 0.95
SMPDL3A-202ENST00000487215 MPLP40238 635 aa20.98■□□□□ 0.95
SMPDL3A-202ENST00000487215 GPR15P49685 360 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms