RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 hCG_1984214I3L0E3 225 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 MTRF1O75570 445 aaKnown RBP4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 BBOX1O75936 387 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 CDKL5O76039 1030 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 RPS2P15880 293 aaKnown RBP4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 XBP1P17861 261 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 VCAM1P19320 739 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 HOXD10P28358 340 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 HSPA4P34932 840 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 PAPOLAP51003 745 aaKnown RBP4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 RAB27AP51159 221 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 NEK2P51955 445 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 CLRN1P58418 232 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 CCT2P78371 535 aaKnown RBP4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 MRPL28Q13084 256 aaKnown RBP4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 ZBTB17Q13105 803 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 CHAF1AQ13111 956 aaPredicted RBP4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 PDCD4Q53EL6 469 aaKnown RBP4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 FAM47AQ5JRC9 791 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 ATXN7L2Q5T6C5 722 aaPredicted RBP4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 FAM102BQ5T8I3 360 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 LRCH2Q5VUJ6 765 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 C16orf54Q6UWD8 224 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 CCDC129Q6ZRS4 1044 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 RUFY3Q7L099 469 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 DDX42Q86XP3 938 aaKnown RBP eCLIP4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 DZIP1Q86YF9 867 aaKnown RBP4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 RNF168Q8IYW5 571 aaPredicted RBP4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 ZNF713Q8N859 430 aaPredicted RBP4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 GABPB2Q8TAK5 448 aaPredicted RBP4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 BRSK1Q8TDC3 778 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 TAF4BQ92750 862 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 SLC5A5Q92911 643 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 TRIM63Q969Q1 353 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 CEP95Q96GE4 821 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 RAX2Q96IS3 184 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 ACAP3Q96P50 834 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 NEK1Q96PY6 1258 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 PLCB1Q9NQ66 1216 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 PRDM11Q9NQV5 511 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 HELLSQ9NRZ9 838 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 TRMT1Q9NXH9 659 aaKnown RBP4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 SEPT10Q9P0V9 454 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 ZMAT5Q9UDW3 170 aaKnown RBP4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 GTF3C4Q9UKN8 822 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 TMPRSS11EQ9UL52 423 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 USP15Q9Y4E8 981 aaPredicted RBP4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 DGKBQ9Y6T7 804 aa4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 MORC2Q9Y6X9 1032 aaPredicted RBP4.7□□□□□ -1.66
R3HDM1-217ENST00000486532 ZMYM3Q14202 1370 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 GPRASP1Q5JY77 1395 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 AKAP10O43572 662 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 ULK1O75385 1050 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 EGR2P11161 476 aaPredicted RBP4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 CPEP16870 476 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 TNFAIP3P21580 790 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 RPS6KB1P23443 525 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 CTSSP25774 331 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 RXRGP48443 463 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 CSE1LP55060 971 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 UBASH3AP57075 661 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 RESTQ13127 1097 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 RRP12Q5JTH9 1297 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 SLC10A5Q5PT55 438 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 ARMC4Q5T2S8 1044 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 FAM102AQ5T9C2 384 aaPredicted RBP4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 AGAP9Q5VTM2 703 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 BROXQ5VW32 411 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 FBXO42Q6P3S6 717 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 TOGARAM2Q6ZUX3 1019 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 MCM10Q7L590 875 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 NAXEQ8NCW5 288 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 MSANTD4Q8NCY6 345 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 PJA1Q8NG27 643 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 TDRD7Q8NHU6 1098 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 MDM1Q8TC05 714 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 USP6NLQ92738 828 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 MFSD3Q96ES6 412 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 HIC2Q96JB3 615 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 MOGAT1Q96PD6 335 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 STRBPQ96SI9 672 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 DUSP26Q9BV47 211 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 SPATA5L1Q9BVQ7 753 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 CDH19Q9H159 772 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 CAAP1Q9H8G2 361 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 RMI1Q9H9A7 625 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 KANSL2Q9H9L4 492 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 TESQ9UGI8 421 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 TBK1Q9UHD2 729 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 ATP6V0A2Q9Y487 856 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 IPPQ9Y573 584 aa4.69□□□□□ -1.66
R3HDM1-217ENST00000486532 SYNJ2BP-COX16A0A087WUM0 186 aa4.68□□□□□ -1.66
R3HDM1-217ENST00000486532 A6NCN8 305 aa4.68□□□□□ -1.66
R3HDM1-217ENST00000486532 INO80B-WBP1J3KQ70 363 aa4.68□□□□□ -1.66
R3HDM1-217ENST00000486532 J3KRW8 73 aa4.68□□□□□ -1.66
R3HDM1-217ENST00000486532 SGTAO43765 313 aa4.68□□□□□ -1.66
R3HDM1-217ENST00000486532 CFIP05156 583 aa4.68□□□□□ -1.66
R3HDM1-217ENST00000486532 ITGAMP11215 1152 aa4.68□□□□□ -1.66
R3HDM1-217ENST00000486532 FDXRP22570 491 aa4.68□□□□□ -1.66
R3HDM1-217ENST00000486532 ATP6V1E1P36543 226 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms