RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 ATG13O75143 517 aa20.91■□□□□ 0.94
CHRD-216ENST00000486066 CDC25CP30307 473 aa20.91■□□□□ 0.94
CHRD-216ENST00000486066 STRN3Q13033 797 aa20.91■□□□□ 0.94
CHRD-216ENST00000486066 RUNX3Q13761 415 aa20.91■□□□□ 0.94
CHRD-216ENST00000486066 HYIQ5T013 277 aa20.91■□□□□ 0.94
CHRD-216ENST00000486066 CMTM8Q8IZV2 173 aa20.91■□□□□ 0.94
CHRD-216ENST00000486066 C8orf76Q96K31 380 aa20.91■□□□□ 0.94
CHRD-216ENST00000486066 SENP8Q96LD8 212 aa20.91■□□□□ 0.94
CHRD-216ENST00000486066 ZMYM5Q9UJ78 669 aa20.91■□□□□ 0.94
CHRD-216ENST00000486066 TBX20Q9UMR3 447 aa20.91■□□□□ 0.94
CHRD-216ENST00000486066 LOC400499M0QZD8 3231 aa20.9■□□□□ 0.94
CHRD-216ENST00000486066 ANO9A1A5B4 782 aa20.9■□□□□ 0.94
CHRD-216ENST00000486066 C1QTNF9BB2RNN3 333 aa20.9■□□□□ 0.94
CHRD-216ENST00000486066 PIRO00625 290 aa20.9■□□□□ 0.94
CHRD-216ENST00000486066 RNF40O75150 1001 aa20.9■□□□□ 0.94
CHRD-216ENST00000486066 EGFP01133 1207 aa20.9■□□□□ 0.94
CHRD-216ENST00000486066 C1QTNF9P0C862 333 aa20.9■□□□□ 0.94
CHRD-216ENST00000486066 HMGA1P17096 107 aaKnown RBP20.9■□□□□ 0.94
CHRD-216ENST00000486066 CDC25AP30304 524 aa20.9■□□□□ 0.94
CHRD-216ENST00000486066 NCKAP1LP55160 1127 aa20.9■□□□□ 0.94
CHRD-216ENST00000486066 PSAPL1Q6NUJ1 521 aa20.9■□□□□ 0.94
CHRD-216ENST00000486066 DSTYKQ6XUX3 929 aa20.9■□□□□ 0.94
CHRD-216ENST00000486066 USP13Q92995 863 aaPredicted RBP20.9■□□□□ 0.94
CHRD-216ENST00000486066 TCHHQ07283 1943 aa20.9■□□□□ 0.94
CHRD-216ENST00000486066 ASCC3Q8N3C0 2202 aaKnown RBP20.89■□□□□ 0.94
CHRD-216ENST00000486066 ANAPC1Q9H1A4 1944 aa20.89■□□□□ 0.93
CHRD-216ENST00000486066 PIGRP01833 764 aa20.89■□□□□ 0.93
CHRD-216ENST00000486066 F11P03951 625 aa20.89■□□□□ 0.93
CHRD-216ENST00000486066 CCDC192P0DO97 292 aa20.89■□□□□ 0.93
CHRD-216ENST00000486066 ODC1P11926 461 aa20.89■□□□□ 0.93
CHRD-216ENST00000486066 PAX3P23760 479 aa20.89■□□□□ 0.93
CHRD-216ENST00000486066 U2AF2P26368 475 aaKnown RBP eCLIP20.89■□□□□ 0.932e-18■□□□□ 9.8
CHRD-216ENST00000486066 TUFMP49411 452 aaKnown RBP20.89■□□□□ 0.93
CHRD-216ENST00000486066 PPP2R3AQ06190 1150 aa20.89■□□□□ 0.93
CHRD-216ENST00000486066 GRSF1Q12849 480 aaKnown RBP eCLIP20.89■□□□□ 0.93
CHRD-216ENST00000486066 RNF43Q68DV7 783 aa20.89■□□□□ 0.93
CHRD-216ENST00000486066 NAIF1Q69YI7 327 aaPredicted RBP20.89■□□□□ 0.93
CHRD-216ENST00000486066 TRIM68Q6AZZ1 485 aa20.89■□□□□ 0.93
CHRD-216ENST00000486066 UNQ6494/PRO21346Q6UXR6 183 aa20.89■□□□□ 0.93
CHRD-216ENST00000486066 PNMA5Q96PV4 448 aa20.89■□□□□ 0.93
CHRD-216ENST00000486066 EBF3Q9H4W6 596 aa20.89■□□□□ 0.93
CHRD-216ENST00000486066 THG1LQ9NWX6 298 aaKnown RBP20.89■□□□□ 0.93
CHRD-216ENST00000486066 EBF1Q9UH73 591 aa20.89■□□□□ 0.93
CHRD-216ENST00000486066 KCNG1Q9UIX4 513 aa20.89■□□□□ 0.93
CHRD-216ENST00000486066 SLC8A2Q9UPR5 921 aa20.89■□□□□ 0.93
CHRD-216ENST00000486066 PCDHB6Q9Y5E3 794 aa20.89■□□□□ 0.93
CHRD-216ENST00000486066 BCLAF3A2AJT9 711 aaKnown RBP20.88■□□□□ 0.93
CHRD-216ENST00000486066 SOBPA7XYQ1 873 aa20.88■□□□□ 0.93
CHRD-216ENST00000486066 GIPC1O14908 333 aa20.88■□□□□ 0.93
CHRD-216ENST00000486066 PRPHP41219 470 aa20.88■□□□□ 0.93
CHRD-216ENST00000486066 SLC12A3P55017 1021 aa20.88■□□□□ 0.93
CHRD-216ENST00000486066 PTPAQ15257 358 aa20.88■□□□□ 0.93
CHRD-216ENST00000486066 C9orf57Q5W0N0 161 aa20.88■□□□□ 0.93
CHRD-216ENST00000486066 KRT79Q5XKE5 535 aa20.88■□□□□ 0.93
CHRD-216ENST00000486066 LRRTM3Q86VH5 581 aa20.88■□□□□ 0.93
CHRD-216ENST00000486066 SYT2Q8N9I0 419 aaPredicted RBP20.88■□□□□ 0.93
CHRD-216ENST00000486066 RAB34Q9BZG1 259 aa20.88■□□□□ 0.93
CHRD-216ENST00000486066 ZMIZ1Q9ULJ6 1067 aa20.88■□□□□ 0.93
CHRD-216ENST00000486066 TNRC6BQ9UPQ9 1833 aaKnown RBP20.88■□□□□ 0.93
CHRD-216ENST00000486066 LNP1A1A4G5 178 aa20.87■□□□□ 0.93
CHRD-216ENST00000486066 DRD1P21728 446 aa20.87■□□□□ 0.93
CHRD-216ENST00000486066 SMTNP53814 917 aa20.87■□□□□ 0.93
CHRD-216ENST00000486066 NLRP12P59046 1061 aa20.87■□□□□ 0.93
CHRD-216ENST00000486066 ZNF268Q14587 947 aaPredicted RBP20.87■□□□□ 0.93
CHRD-216ENST00000486066 KYAT1Q16773 422 aa20.87■□□□□ 0.93
CHRD-216ENST00000486066 SLC39A12Q504Y0 691 aa20.87■□□□□ 0.93
CHRD-216ENST00000486066 ARMCX5Q6P1M9 558 aa20.87■□□□□ 0.93
CHRD-216ENST00000486066 SLC39A4Q6P5W5 647 aa20.87■□□□□ 0.93
CHRD-216ENST00000486066 SYT13Q7L8C5 426 aa20.87■□□□□ 0.93
CHRD-216ENST00000486066 KCTD17Q8N5Z5 321 aa20.87■□□□□ 0.93
CHRD-216ENST00000486066 C2orf15Q8WU43 125 aaKnown RBP20.87■□□□□ 0.93
CHRD-216ENST00000486066 HHIPQ96QV1 700 aa20.87■□□□□ 0.93
CHRD-216ENST00000486066 EDEM2Q9BV94 578 aa20.87■□□□□ 0.93
CHRD-216ENST00000486066 CCSER1Q9C0I3 900 aa20.87■□□□□ 0.93
CHRD-216ENST00000486066 CPSF3Q9UKF6 684 aaKnown RBP20.87■□□□□ 0.93
CHRD-216ENST00000486066 THADAQ6YHU6 1953 aa20.86■□□□□ 0.93
CHRD-216ENST00000486066 LAD1O00515 517 aa20.86■□□□□ 0.93
CHRD-216ENST00000486066 OGTO15294 1046 aa20.86■□□□□ 0.93
CHRD-216ENST00000486066 XPOTO43592 962 aaKnown RBP20.86■□□□□ 0.93
CHRD-216ENST00000486066 TADA3O75528 432 aa20.86■□□□□ 0.93
CHRD-216ENST00000486066 HAPLN1P10915 354 aaPredicted RBP20.86■□□□□ 0.93
CHRD-216ENST00000486066 HOXB3P14651 431 aaPredicted RBP20.86■□□□□ 0.93
CHRD-216ENST00000486066 ARSAP15289 507 aa20.86■□□□□ 0.93
CHRD-216ENST00000486066 GJA4P35212 333 aa20.86■□□□□ 0.93
CHRD-216ENST00000486066 GALK1P51570 392 aa20.86■□□□□ 0.93
CHRD-216ENST00000486066 NEK4P51957 841 aa20.86■□□□□ 0.93
CHRD-216ENST00000486066 RAD51AP2Q09MP3 1159 aa20.86■□□□□ 0.93
CHRD-216ENST00000486066 ARSHQ5FYA8 562 aa20.86■□□□□ 0.93
CHRD-216ENST00000486066 JADE1Q6IE81 842 aa20.86■□□□□ 0.93
CHRD-216ENST00000486066 SEPT5Q99719 369 aaPredicted RBP20.86■□□□□ 0.93
CHRD-216ENST00000486066 LLPHQ9BRT6 129 aaKnown RBP20.86■□□□□ 0.93
CHRD-216ENST00000486066 KIF9Q9HAQ2 790 aa20.86■□□□□ 0.93
CHRD-216ENST00000486066 TDP1Q9NUW8 608 aa20.86■□□□□ 0.93
CHRD-216ENST00000486066 KCND2Q9NZV8 630 aa20.86■□□□□ 0.93
CHRD-216ENST00000486066 PCNX2A6NKB5 2137 aa20.86■□□□□ 0.93
CHRD-216ENST00000486066 HELZP42694 1942 aaKnown RBP20.85■□□□□ 0.93
CHRD-216ENST00000486066 A0A0B4J269 797 aa20.85■□□□□ 0.93
CHRD-216ENST00000486066 DCLK1O15075 740 aa20.85■□□□□ 0.93
CHRD-216ENST00000486066 NFICP08651 508 aa20.85■□□□□ 0.93
CHRD-216ENST00000486066 DDX6P26196 483 aaKnown RBP eCLIP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms