RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 GALTP07902 379 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 ATP1A3P13637 1013 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 KCNE1P15382 129 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 LAG3P18627 525 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 IGFBP6P24592 240 aaPredicted RBP6.06□□□□□ -1.44
COPS3-208ENST00000486032 BRCC3P46736 316 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 ALDH7A1P49419 539 aaKnown RBP6.06□□□□□ -1.44
COPS3-208ENST00000486032 MXI1P50539 228 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 HTRA4P83105 476 aaPredicted RBP6.06□□□□□ -1.44
COPS3-208ENST00000486032 MYL7Q01449 175 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 PPP3CAQ08209 521 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 LRMPQ12912 555 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 RAB30Q15771 203 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 MAN2A1Q16706 1144 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 PTPN21Q16825 1174 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 CBWD6Q4V339 395 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 XKR4Q5GH76 650 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 TCP11X2Q5H9J9 407 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 CBWD3Q5JTY5 395 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 CBWD5Q5RIA9 395 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 C1orf220Q5T0J3 134 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 TDRD10Q5VZ19 366 aaKnown RBP6.06□□□□□ -1.44
COPS3-208ENST00000486032 PPP2R2DQ66LE6 453 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 DSTYKQ6XUX3 929 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 SCARA5Q6ZMJ2 495 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 FAM43BQ6ZT52 329 aaPredicted RBP6.06□□□□□ -1.44
COPS3-208ENST00000486032 TRAPPC11Q7Z392 1133 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 CEP57Q86XR8 500 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 IRF2BP1Q8IU81 584 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 WDR49Q8IV35 697 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 COLGALT2Q8IYK4 626 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 C1orf127Q8N9H9 656 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 COLGALT1Q8NBJ5 622 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 MYLIPQ8WY64 445 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 ARNTL2Q8WYA1 636 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 TIFAQ96CG3 184 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 ZNF558Q96NG5 402 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 PPP1R10Q96QC0 940 aaKnown RBP6.06□□□□□ -1.44
COPS3-208ENST00000486032 C17orf80Q9BSJ5 609 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 CRACR2AQ9BSW2 395 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 PI4K2AQ9BTU6 479 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 COLEC11Q9BWP8 271 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 PLVAPQ9BX97 442 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 SLC28A3Q9HAS3 691 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 PRDM6Q9NQX0 595 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 SLC38A7Q9NVC3 462 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 MTMR10Q9NXD2 777 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 PCDHB12Q9Y5F1 795 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 PCDHA11Q9Y5I1 949 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 ANK1P16157 1881 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 RALGAPA2Q2PPJ7 1873 aa6.06□□□□□ -1.44
COPS3-208ENST00000486032 A0A1W2PPC1 479 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 C2CD2LO14523 706 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 MAPK13O15264 365 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 LRRN2O75325 713 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 KIF4AO95239 1232 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 CAVIN2O95810 425 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 HLA-DRAP01903 254 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 C4BPAP04003 597 aaKnown RBP6.05□□□□□ -1.44
COPS3-208ENST00000486032 ITGB1P05556 798 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 LINC00271P0C7V0 271 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 EEF1GP26641 437 aaKnown RBP6.05□□□□□ -1.44
COPS3-208ENST00000486032 FMO5P49326 533 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 CDR1P51861 262 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 COPB1P53618 953 aaKnown RBP6.05□□□□□ -1.44
COPS3-208ENST00000486032 MYL6P60660 151 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 RBP5P82980 135 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 FANCCQ00597 558 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 POU5F1Q01860 360 aaKnown RBP6.05□□□□□ -1.44
COPS3-208ENST00000486032 CETN1Q12798 172 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 NCOA4Q13772 614 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 KRT31Q15323 416 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 NAB2Q15742 525 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 ZBTB6Q15916 424 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 FILIP1LQ4L180 1135 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 VWA3BQ502W6 1294 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 WDR44Q5JSH3 913 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 FKBP15Q5T1M5 1219 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 CDKAL1Q5VV42 579 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 C9orf57Q5W0N0 161 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 KRT39Q6A163 491 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 SPOPLQ6IQ16 392 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 FOXR2Q6PJQ5 311 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 KCNT2Q6UVM3 1135 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 TMEM173Q86WV6 379 aaPredicted RBP6.05□□□□□ -1.44
COPS3-208ENST00000486032 TRIM59Q8IWR1 403 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 DEFB123Q8N688 67 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 KLHL23Q8NBE8 558 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 TAS1R2Q8TE23 839 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 GDPD5Q8WTR4 605 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 SLC35C1Q96A29 364 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 BORCS6Q96GS4 357 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 TMEM169Q96HH4 297 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 TGS1Q96RS0 853 aaKnown RBP6.05□□□□□ -1.44
COPS3-208ENST00000486032 MMS19Q96T76 1030 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 NDST4Q9H3R1 872 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 PRDM12Q9H4Q4 367 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 RC3H2Q9HBD1 1191 aaKnown RBP6.05□□□□□ -1.44
COPS3-208ENST00000486032 TMEM8AQ9HCN3 771 aa6.05□□□□□ -1.44
COPS3-208ENST00000486032 ALG13Q9NP73 1137 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms