RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 CCDC65Q8IXS2 484 aa22.51■■□□□ 1.19
LMBR1-217ENST00000485985 SYCP3Q8IZU3 236 aa22.51■■□□□ 1.19
LMBR1-217ENST00000485985 C1orf127Q8N9H9 656 aa22.51■■□□□ 1.19
LMBR1-217ENST00000485985 CXorf38Q8TB03 319 aa22.51■■□□□ 1.19
LMBR1-217ENST00000485985 ZSCAN18Q8TBC5 510 aaPredicted RBP22.51■■□□□ 1.19
LMBR1-217ENST00000485985 TRIM9Q9C026 710 aa22.51■■□□□ 1.19
LMBR1-217ENST00000485985 PCIF1Q9H4Z3 704 aa22.51■■□□□ 1.19
LMBR1-217ENST00000485985 TRPV4Q9HBA0 871 aa22.51■■□□□ 1.19
LMBR1-217ENST00000485985 DSEQ9UL01 958 aa22.51■■□□□ 1.19
LMBR1-217ENST00000485985 GREB1Q4ZG55 1949 aa22.51■■□□□ 1.19
LMBR1-217ENST00000485985 KPNA7A9QM74 516 aa22.5■■□□□ 1.19
LMBR1-217ENST00000485985 CUTAO60888 179 aa22.5■■□□□ 1.19
LMBR1-217ENST00000485985 ITGB3P05106 788 aa22.5■■□□□ 1.19
LMBR1-217ENST00000485985 TDGF1P13385 188 aa22.5■■□□□ 1.19
LMBR1-217ENST00000485985 ATF6P18850 670 aa22.5■■□□□ 1.19
LMBR1-217ENST00000485985 TFAMQ00059 246 aaKnown RBP22.5■■□□□ 1.19
LMBR1-217ENST00000485985 PKP1Q13835 747 aa22.5■■□□□ 1.19
LMBR1-217ENST00000485985 FOXD4L6Q3SYB3 417 aaPredicted RBP22.5■■□□□ 1.19
LMBR1-217ENST00000485985 SV2CQ496J9 727 aa22.5■■□□□ 1.19
LMBR1-217ENST00000485985 FOXD4L3Q6VB84 417 aaPredicted RBP22.5■■□□□ 1.19
LMBR1-217ENST00000485985 GAREM2Q75VX8 874 aa22.5■■□□□ 1.19
LMBR1-217ENST00000485985 HSCBQ8IWL3 235 aa22.5■■□□□ 1.19
LMBR1-217ENST00000485985 DEPDC1BQ8WUY9 529 aa22.5■■□□□ 1.19
LMBR1-217ENST00000485985 FAM3CQ92520 227 aa22.5■■□□□ 1.19
LMBR1-217ENST00000485985 PSMG2Q969U7 264 aa22.5■■□□□ 1.19
LMBR1-217ENST00000485985 DHX58Q96C10 678 aa22.5■■□□□ 1.19
LMBR1-217ENST00000485985 LMAN1LQ9HAT1 526 aa22.5■■□□□ 1.19
LMBR1-217ENST00000485985 PIAS3Q9Y6X2 628 aa22.5■■□□□ 1.19
LMBR1-217ENST00000485985 ZSCAN22P10073 491 aaPredicted RBP22.49■■□□□ 1.19
LMBR1-217ENST00000485985 POLR2BP30876 1174 aaKnown RBP22.49■■□□□ 1.19
LMBR1-217ENST00000485985 HOXD13P35453 343 aa22.49■■□□□ 1.19
LMBR1-217ENST00000485985 ALDH1A3P47895 512 aa22.49■■□□□ 1.19
LMBR1-217ENST00000485985 NRLP54845 237 aa22.49■■□□□ 1.19
LMBR1-217ENST00000485985 LRRTM3Q86VH5 581 aa22.49■■□□□ 1.19
LMBR1-217ENST00000485985 METTL23Q86XA0 190 aa22.49■■□□□ 1.19
LMBR1-217ENST00000485985 MFSD6LQ8IWD5 586 aa22.49■■□□□ 1.19
LMBR1-217ENST00000485985 RSPRY1Q96DX4 576 aa22.49■■□□□ 1.19
LMBR1-217ENST00000485985 ZNF560Q96MR9 790 aa22.49■■□□□ 1.19
LMBR1-217ENST00000485985 SEPT5Q99719 369 aaPredicted RBP22.49■■□□□ 1.19
LMBR1-217ENST00000485985 LPIN3Q9BQK8 851 aa22.49■■□□□ 1.19
LMBR1-217ENST00000485985 IER2Q9BTL4 223 aa22.49■■□□□ 1.19
LMBR1-217ENST00000485985 MKNK1Q9BUB5 465 aa22.49■■□□□ 1.19
LMBR1-217ENST00000485985 CUEDC2Q9H467 287 aa22.49■■□□□ 1.19
LMBR1-217ENST00000485985 SLITRK6Q9H5Y7 841 aa22.49■■□□□ 1.19
LMBR1-217ENST00000485985 TMEM206Q9H813 350 aa22.49■■□□□ 1.19
LMBR1-217ENST00000485985 PDE11AQ9HCR9 933 aa22.49■■□□□ 1.19
LMBR1-217ENST00000485985 HSFX1Q9UBD0 423 aa22.49■■□□□ 1.19
LMBR1-217ENST00000485985 SPTBN2O15020 2390 aa22.48■■□□□ 1.19
LMBR1-217ENST00000485985 PRR5-ARHGAP8B1AHC4 643 aa22.48■■□□□ 1.19
LMBR1-217ENST00000485985 TULP1O00294 542 aaPredicted RBP22.48■■□□□ 1.19
LMBR1-217ENST00000485985 ZNF263O14978 683 aa22.48■■□□□ 1.19
LMBR1-217ENST00000485985 EXTL3O43909 919 aa22.48■■□□□ 1.19
LMBR1-217ENST00000485985 LDHAP00338 332 aaKnown RBP22.48■■□□□ 1.19
LMBR1-217ENST00000485985 F13A1P00488 732 aa22.48■■□□□ 1.19
LMBR1-217ENST00000485985 TGM1P22735 817 aa22.48■■□□□ 1.19
LMBR1-217ENST00000485985 ATXN1P54253 815 aaKnown RBP22.48■■□□□ 1.19
LMBR1-217ENST00000485985 ARHGAP8P85298 464 aa22.48■■□□□ 1.19
LMBR1-217ENST00000485985 LMNB2Q03252 620 aa22.48■■□□□ 1.19
LMBR1-217ENST00000485985 DNAJB7Q7Z6W7 309 aaPredicted RBP22.48■■□□□ 1.19
LMBR1-217ENST00000485985 NOC3LQ8WTT2 800 aaKnown RBP22.48■■□□□ 1.19
LMBR1-217ENST00000485985 MTMR12Q9C0I1 747 aa22.48■■□□□ 1.19
LMBR1-217ENST00000485985 GPR88Q9GZN0 384 aa22.48■■□□□ 1.19
LMBR1-217ENST00000485985 ANAPC1Q9H1A4 1944 aa22.48■■□□□ 1.19
LMBR1-217ENST00000485985 PTPRJQ12913 1337 aa22.48■■□□□ 1.19
LMBR1-217ENST00000485985 CCR3P51677 355 aa22.47■■□□□ 1.19
LMBR1-217ENST00000485985 ASIC1P78348 528 aa22.47■■□□□ 1.19
LMBR1-217ENST00000485985 PPP2R5DQ14738 602 aa22.47■■□□□ 1.19
LMBR1-217ENST00000485985 MGAT5BQ3V5L5 792 aa22.47■■□□□ 1.19
LMBR1-217ENST00000485985 GPD1LQ8N335 351 aa22.47■■□□□ 1.19
LMBR1-217ENST00000485985 TMLHEQ9NVH6 421 aa22.47■■□□□ 1.19
LMBR1-217ENST00000485985 SIX4Q9UIU6 781 aa22.47■■□□□ 1.19
LMBR1-217ENST00000485985 GMEB2Q9UKD1 530 aa22.47■■□□□ 1.19
LMBR1-217ENST00000485985 USP18Q9UMW8 372 aa22.47■■□□□ 1.19
LMBR1-217ENST00000485985 L1RE1Q9UN81 338 aa22.47■■□□□ 1.19
LMBR1-217ENST00000485985 AGAP1Q9UPQ3 857 aa22.47■■□□□ 1.19
LMBR1-217ENST00000485985 ASB3Q9Y575 518 aa22.47■■□□□ 1.19
LMBR1-217ENST00000485985 HEPACAM2A8MVW5 462 aa22.46■■□□□ 1.19
LMBR1-217ENST00000485985 ARNTLO00327 626 aa22.46■■□□□ 1.19
LMBR1-217ENST00000485985 CHRNB1P11230 501 aa22.46■■□□□ 1.19
LMBR1-217ENST00000485985 CASP1P29466 404 aa22.46■■□□□ 1.19
LMBR1-217ENST00000485985 PNPLA4P41247 253 aa22.46■■□□□ 1.19
LMBR1-217ENST00000485985 MLLT6P55198 1093 aaPredicted RBP22.46■■□□□ 1.19
LMBR1-217ENST00000485985 LMBRD2Q68DH5 695 aaPredicted RBP22.46■■□□□ 1.19
LMBR1-217ENST00000485985 CNNM4Q6P4Q7 775 aa22.46■■□□□ 1.19
LMBR1-217ENST00000485985 EPM2AIP1Q7L775 607 aaPredicted RBP22.46■■□□□ 1.19
LMBR1-217ENST00000485985 CBWD2Q8IUF1 395 aa22.46■■□□□ 1.19
LMBR1-217ENST00000485985 THEM5Q8N1Q8 247 aa22.46■■□□□ 1.19
LMBR1-217ENST00000485985 PDCL2Q8N4E4 241 aa22.46■■□□□ 1.19
LMBR1-217ENST00000485985 E2F7Q96AV8 911 aa22.46■■□□□ 1.19
LMBR1-217ENST00000485985 PARD6AQ9NPB6 346 aa22.46■■□□□ 1.19
LMBR1-217ENST00000485985 ABI2Q9NYB9 513 aaPredicted RBP22.46■■□□□ 1.19
LMBR1-217ENST00000485985 ITGA11Q9UKX5 1188 aa22.46■■□□□ 1.19
LMBR1-217ENST00000485985 HELZP42694 1942 aaKnown RBP22.45■■□□□ 1.18
LMBR1-217ENST00000485985 HSP90AA1P07900 732 aaKnown RBP22.45■■□□□ 1.18
LMBR1-217ENST00000485985 CCNE1P24864 410 aa22.45■■□□□ 1.18
LMBR1-217ENST00000485985 GABRR2P28476 465 aa22.45■■□□□ 1.18
LMBR1-217ENST00000485985 BFSP1Q12934 665 aa22.45■■□□□ 1.18
LMBR1-217ENST00000485985 GPIHBP1Q8IV16 184 aa22.45■■□□□ 1.18
LMBR1-217ENST00000485985 CELF5Q8N6W0 485 aaKnown RBP22.45■■□□□ 1.18
LMBR1-217ENST00000485985 LRRC52Q8N7C0 313 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms