RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 BECN2A8MW95 431 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 H7C4K7 107 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 STX10O60499 249 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 ATICP31939 592 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 KLK7P49862 253 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 MCCD1P59942 119 aaPredicted RBP12.7□□□□□ -0.38
APTX-227ENST00000485479 MAN2A1Q16706 1144 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 RARS2Q5T160 578 aaKnown RBP12.7□□□□□ -0.38
APTX-227ENST00000485479 DPH6Q7L8W6 267 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 FAM114A1Q8IWE2 563 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 KREMEN2Q8NCW0 462 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 HLA-CQ95604 372 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 NIF3L1Q9GZT8 377 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 NDST4Q9H3R1 872 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 CRTAC1Q9NQ79 661 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 ABI2Q9NYB9 513 aaPredicted RBP12.7□□□□□ -0.38
APTX-227ENST00000485479 AJAP1Q9UKB5 411 aaPredicted RBP12.7□□□□□ -0.38
APTX-227ENST00000485479 DSEQ9UL01 958 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 A8MXQ7 604 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 GABRDO14764 452 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 ZNF18P17022 549 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 CDK11BP21127 795 aaKnown RBP12.7□□□□□ -0.38
APTX-227ENST00000485479 GPR15P49685 360 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 RAB33AQ14088 237 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 VWA3BQ502W6 1294 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 CT47A1Q5JQC4 288 aaPredicted RBP12.7□□□□□ -0.38
APTX-227ENST00000485479 WDR44Q5JSH3 913 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 LILRA6Q6PI73 481 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 SYCE2Q6PIF2 218 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 LIMS2Q7Z4I7 341 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 PPM1KQ8N3J5 372 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 GPR152Q8TDT2 470 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 SYT15Q9BQS2 421 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 INTS2Q9H0H0 1204 aaKnown RBP12.7□□□□□ -0.38
APTX-227ENST00000485479 SNX25Q9H3E2 840 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 VRTNQ9H8Y1 702 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 CYP4F11Q9HBI6 524 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 COQ4Q9Y3A0 265 aa12.7□□□□□ -0.38
APTX-227ENST00000485479 MTCL1Q9Y4B5 1905 aaKnown RBP12.7□□□□□ -0.38
APTX-227ENST00000485479 MTMR11A4FU01 709 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 CLDN5O00501 218 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 PRRG1O14668 218 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 CCL16O15467 120 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 STAU1O95793 577 aaKnown RBP12.69□□□□□ -0.38
APTX-227ENST00000485479 C8AP07357 584 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 GNL1P36915 607 aaPredicted RBP12.69□□□□□ -0.38
APTX-227ENST00000485479 NDST1P52848 882 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 ENPEPQ07075 957 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 DUSP4Q13115 394 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 MDH1BQ5I0G3 518 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 INTS6LQ5JSJ4 861 aaKnown RBP12.69□□□□□ -0.38
APTX-227ENST00000485479 SDHAF4Q5VUM1 108 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 PHLDB3Q6NSJ2 640 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 LRSAM1Q6UWE0 723 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 ACOT1Q86TX2 421 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 C12orf29Q8N999 325 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 CCDC150Q8NCX0 1101 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 SEPT5Q99719 369 aaPredicted RBP12.69□□□□□ -0.38
APTX-227ENST00000485479 BCO2Q9BYV7 579 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 ZCWPW1Q9H0M4 648 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 FAM49BQ9NUQ9 324 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 FBXW11Q9UKB1 542 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 TCF20Q9UGU0 1960 aaKnown RBP12.69□□□□□ -0.38
APTX-227ENST00000485479 PNMA6AP0CW24 399 aaPredicted RBP12.69□□□□□ -0.38
APTX-227ENST00000485479 WARSP23381 471 aaKnown RBP12.69□□□□□ -0.38
APTX-227ENST00000485479 EEF1GP26641 437 aaKnown RBP12.69□□□□□ -0.38
APTX-227ENST00000485479 CREMQ03060 361 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 ANKRD54Q6NXT1 300 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 PDXDC1Q6P996 788 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 TRIM65Q6PJ69 517 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 APTXQ7Z2E3 356 aaKnown RBP12.69□□□□□ -0.38
APTX-227ENST00000485479 THEM5Q8N1Q8 247 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 TMEM86AQ8N2M4 240 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 ST13P5Q8NFI4 369 aaPredicted RBP12.69□□□□□ -0.38
APTX-227ENST00000485479 ZNF461Q8TAF7 563 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 CDCA3Q99618 268 aaPredicted RBP12.69□□□□□ -0.38
APTX-227ENST00000485479 BPIFA3Q9BQP9 254 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 TSPY26PQ9H489 355 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 HCFC1R1Q9NWW0 138 aa12.69□□□□□ -0.38
APTX-227ENST00000485479 CCDC195A0A1B0GUA6 201 aa12.68□□□□□ -0.38
APTX-227ENST00000485479 FAM170AA1A519 330 aa12.68□□□□□ -0.38
APTX-227ENST00000485479 OR6C75A6NL08 312 aa12.68□□□□□ -0.38
APTX-227ENST00000485479 N4BP1O75113 896 aaKnown RBP12.68□□□□□ -0.38
APTX-227ENST00000485479 ABLIM3O94929 683 aa12.68□□□□□ -0.38
APTX-227ENST00000485479 CCDC130P13994 396 aa12.68□□□□□ -0.38
APTX-227ENST00000485479 ATF2P15336 505 aa12.68□□□□□ -0.38
APTX-227ENST00000485479 SSTR3P32745 418 aaPredicted RBP12.68□□□□□ -0.38
APTX-227ENST00000485479 LHX1P48742 406 aa12.68□□□□□ -0.38
APTX-227ENST00000485479 COPB1P53618 953 aaKnown RBP12.68□□□□□ -0.38
APTX-227ENST00000485479 CACNA2D1P54289 1103 aa12.68□□□□□ -0.38
APTX-227ENST00000485479 CYP27A1Q02318 531 aa12.68□□□□□ -0.38
APTX-227ENST00000485479 KCNMA1Q12791 1236 aa12.68□□□□□ -0.38
APTX-227ENST00000485479 CUL2Q13617 745 aa12.68□□□□□ -0.38
APTX-227ENST00000485479 COL19A1Q14993 1142 aa12.68□□□□□ -0.38
APTX-227ENST00000485479 MGAT5BQ3V5L5 792 aa12.68□□□□□ -0.38
APTX-227ENST00000485479 WHAMMQ8TF30 809 aa12.68□□□□□ -0.38
APTX-227ENST00000485479 CASP10Q92851 521 aa12.68□□□□□ -0.38
APTX-227ENST00000485479 MYLPFQ96A32 169 aa12.68□□□□□ -0.38
APTX-227ENST00000485479 MSLNLQ96KJ4 702 aa12.68□□□□□ -0.38
APTX-227ENST00000485479 NT5C1BQ96P26 610 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms