RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 SDK1Q7Z5N4 2213 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 C4orf47A7E2U8 309 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 B4E1Z4 1266 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 MEIS2O14770 477 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 TGM5O43548 720 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 CSDE1O75534 798 aaKnown RBP6.02□□□□□ -1.45
PTPN4-210ENST00000485247 OFD1O75665 1012 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 DDHD2O94830 711 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 C22orf31O95567 290 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 SOD2P04179 222 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 ALDH2P05091 517 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 PCP11498 1178 aaKnown RBP6.02□□□□□ -1.45
PTPN4-210ENST00000485247 HOXC13P31276 330 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 SLC26A2P50443 739 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 BNIP3Q12983 259 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 CCDC178Q5BJE1 867 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 ZNF484Q5JVG2 852 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 TCEAL6Q6IPX3 200 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 PROSER1Q86XN7 944 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 ITFG1Q8TB96 612 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 HDAC7Q8WUI4 952 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 FAM3CQ92520 227 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 CUL5Q93034 780 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 TCEAL3Q969E4 200 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 FAM193BQ96PV7 902 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-210ENST00000485247 PLA2G2FQ9BZM2 168 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 GZF1Q9H116 711 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-210ENST00000485247 ZBTB40Q9NUA8 1239 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 STK39Q9UEW8 545 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 AKT3Q9Y243 479 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 SLC5A6Q9Y289 635 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 SSX2IPQ9Y2D8 614 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 FAN1Q9Y2M0 1017 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 PRG3Q9Y2Y8 225 aaPredicted RBP6.02□□□□□ -1.45
PTPN4-210ENST00000485247 UBIAD1Q9Y5Z9 338 aa6.02□□□□□ -1.45
PTPN4-210ENST00000485247 DSPP15924 2871 aaKnown RBP6.02□□□□□ -1.45
PTPN4-210ENST00000485247 GREB1Q4ZG55 1949 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 EVPLQ92817 2033 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 K7ESF4 209 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 MAN2B1O00754 1011 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 NRP1O14786 923 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 FANCGO15287 622 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 CYTH3O43739 400 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 EPN2O95208 641 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 PAPLNO95428 1278 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 CEACAM5P06731 702 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 CEACAM1P13688 526 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 RPL17P18621 184 aaKnown RBP6.01□□□□□ -1.45
PTPN4-210ENST00000485247 CD96P40200 585 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 MPLP40238 635 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 GLUD2P49448 558 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 TROAPQ12815 778 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 IFIT1BQ5T764 474 aaKnown RBP6.01□□□□□ -1.45
PTPN4-210ENST00000485247 MEI1Q5TIA1 1274 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 DAB2IPQ5VWQ8 1189 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 TWF2Q6IBS0 349 aaKnown RBP6.01□□□□□ -1.45
PTPN4-210ENST00000485247 KBTBD6Q86V97 674 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 KRTAP19-1Q8IUB9 90 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 CKAP2LQ8IYA6 745 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 PI4K2BQ8TCG2 481 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 HNRNPLLQ8WVV9 542 aaKnown RBP6.01□□□□□ -1.45
PTPN4-210ENST00000485247 ING5Q8WYH8 240 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 ELMO3Q96BJ8 720 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 PLPPR2Q96GM1 343 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 LOXL4Q96JB6 756 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 B3GALT6Q96L58 329 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 FAM227BQ96M60 508 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 SCLT1Q96NL6 688 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 SDF4Q9BRK5 362 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 IER2Q9BTL4 223 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 EDEM2Q9BV94 578 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 HERC2P3Q9BVR0 1158 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 RIOX1Q9H6W3 641 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 FBRSQ9HAH7 460 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 RXFP1Q9HBX9 757 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 JADE2Q9NQC1 790 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 KCNH7Q9NS40 1196 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 ZSWIM5Q9P217 1185 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 KLK13Q9UKR3 277 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 MSRB2Q9Y3D2 182 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 NEUROG3Q9Y4Z2 214 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 PCDHB5Q9Y5E4 795 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 COL1A2P08123 1366 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 DOCK6Q96HP0 2047 aa6.01□□□□□ -1.45
PTPN4-210ENST00000485247 TTC41PQ6P2S7 1318 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 HELZ2Q9BYK8 2649 aaKnown RBP6□□□□□ -1.45
PTPN4-210ENST00000485247 AKAP13Q12802 2813 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 NAV2Q8IVL1 2488 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 IGKV6D-21A0A0A0MT36 114 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 A0A0D9SFI3 127 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 PRAMEF27A3QJZ7 478 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 DDX39AO00148 427 aaKnown RBP6□□□□□ -1.45
PTPN4-210ENST00000485247 ZNF213O14771 459 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 CCL16O15467 120 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 MAFGO15525 162 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 POMCP01189 267 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 PRB1P04280 392 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 CHRNB1P11230 501 aa6□□□□□ -1.45
PTPN4-210ENST00000485247 DARSP14868 501 aaKnown RBP6□□□□□ -1.45
PTPN4-210ENST00000485247 RAP1GAPP47736 663 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms