RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 GJB4Q9NTQ9 266 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 ARGLU1Q9NWB6 273 aaPredicted RBP5.04□□□□□ -1.6
PTCD3-214ENST00000483925 CALCOCO1Q9P1Z2 691 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 COL20A1Q9P218 1284 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 HERC5Q9UII4 1024 aaKnown RBP5.04□□□□□ -1.6
PTCD3-214ENST00000483925 CROTQ9UKG9 612 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 PCDHB6Q9Y5E3 794 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 PCDHB4Q9Y5E5 795 aa5.04□□□□□ -1.6
PTCD3-214ENST00000483925 A0A0B4J269 797 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 LRRC14BA6NHZ5 514 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 AQP12BA6NM10 295 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 TBC1D4O60343 1298 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 FZD7O75084 574 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 TADA3O75528 432 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 TMEM63AO94886 807 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 RTN3O95197 1032 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-214ENST00000483925 MT-ND5P03915 603 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 IDEP14735 1019 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 AKR1B1P15121 316 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 CHMP24386 653 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 CST5P28325 142 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-214ENST00000483925 ACVRL1P37023 503 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 EPHB4P54760 987 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 CASP6P55212 293 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 RNASE9P60153 205 aaKnown RBP5.03□□□□□ -1.6
PTCD3-214ENST00000483925 ARF3P61204 181 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-214ENST00000483925 ARF1P84077 181 aaKnown RBP5.03□□□□□ -1.6
PTCD3-214ENST00000483925 PLIN5Q00G26 463 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 RAB30Q15771 203 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 KHDC1Q4VXA5 237 aaKnown RBP5.03□□□□□ -1.6
PTCD3-214ENST00000483925 C3orf38Q5JPI3 329 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 TEPPQ6URK8 271 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 UNQ6494/PRO21346Q6UXR6 183 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 GADL1Q6ZQY3 521 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 USP51Q70EK9 711 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 KRT74Q7RTS7 529 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 SNX32Q86XE0 403 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 GATAD2AQ86YP4 633 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 HERC6Q8IVU3 1022 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 GLB1L2Q8IW92 636 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 CCDC117Q8IWD4 279 aaPredicted RBP5.03□□□□□ -1.6
PTCD3-214ENST00000483925 KLHL36Q8N4N3 616 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 OR6B3Q8NGW1 331 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 IGDCC4Q8TDY8 1250 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 ATRIPQ8WXE1 791 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 ASB2Q96Q27 587 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 TMEM209Q96SK2 561 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 PDCD2LQ9BRP1 358 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 KATNAL1Q9BW62 490 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 MRIQ9BWK5 157 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 KRT84Q9NSB2 600 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 STK32BQ9NY57 414 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 MYOTQ9UBF9 498 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 FTSJ1Q9UET6 329 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 SRP68Q9UHB9 627 aaKnown RBP5.03□□□□□ -1.6
PTCD3-214ENST00000483925 ISY1Q9ULR0 285 aaKnown RBP5.03□□□□□ -1.6
PTCD3-214ENST00000483925 PCDHA6Q9UN73 950 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 ARHGAP26Q9UNA1 814 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 WASF3Q9UPY6 502 aa5.03□□□□□ -1.6
PTCD3-214ENST00000483925 FAM234BA2RU67 622 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 PRAMEF22A3QJZ6 481 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 PI4KAP2A4QPH2 592 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 TSPY2A6NKD2 308 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 P4HA2O15460 535 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 AHCYL1O43865 530 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 DHX16O60231 1041 aaKnown RBP5.02□□□□□ -1.61
PTCD3-214ENST00000483925 B4GALT4O60513 344 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 MTA2O94776 668 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 ENDOD1O94919 500 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 LRG1P02750 347 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 DNTTP04053 509 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 TSPY3P0CV98 308 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 TSPY8P0CW00 308 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 TGFB3P10600 412 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 CTSSP25774 331 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 AOAHP28039 575 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 SESN2P58004 480 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-214ENST00000483925 RPS16P62249 146 aaKnown RBP5.02□□□□□ -1.61
PTCD3-214ENST00000483925 TSPY1Q01534 308 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 CALD1Q05682 793 aaKnown RBP5.02□□□□□ -1.61
PTCD3-214ENST00000483925 PPP3CAQ08209 521 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 CUL4AQ13619 759 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 SLFN13Q68D06 897 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 SULT6B1Q6IMI4 303 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 ZNF585AQ6P3V2 769 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 RSPH3Q86UC2 560 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 ZFPM1Q8IX07 1006 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 GPR156Q8NFN8 814 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 OR2I1PQ8NGU4 316 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.02□□□□□ -1.61
PTCD3-214ENST00000483925 STYXQ8WUJ0 223 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 THAP4Q8WY91 577 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 SDCCAG3Q96C92 435 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 CDHR1Q96JP9 859 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 MRGPRX1Q96LB2 322 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 ZNF747Q9BV97 191 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 MAGEB5Q9BZ81 275 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 BARX1Q9HBU1 254 aaPredicted RBP5.02□□□□□ -1.61
PTCD3-214ENST00000483925 KCND1Q9NSA2 647 aa5.02□□□□□ -1.61
PTCD3-214ENST00000483925 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms