RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.79□□□□□ -1.48
COL17A1-206ENST00000483876 CEP250Q9BV73 2442 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 NCANO14594 1321 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 SPEGQ15772 3267 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 TARSL2A2RTX5 802 aaKnown RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 GRID2IPA4D2P6 1211 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 TAF4O00268 1085 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 ENC1O14682 589 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 ADCY6O43306 1168 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 ATP8B1O43520 1251 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 NCK2O43639 380 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 TSPAN1O60635 241 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 LRRN2O75325 713 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 PALMO75781 387 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 ERLIN2O94905 339 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 CST3P01034 146 aaPredicted RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 TNNC2P02585 160 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 CYP1A1P04798 512 aaPredicted RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 CYP1A2P05177 515 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 FAM163BP0C2L3 166 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 STAG3L1P0CL83 205 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 CYP2C9P11712 490 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 UNGP13051 313 aaPredicted RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 DARSP14868 501 aaKnown RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 H2AFXP16104 143 aaPredicted RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 EIF4BP23588 611 aaKnown RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 MCM3P25205 808 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 HOXA11P31270 313 aaPredicted RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 GRM5P41594 1212 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 PIK3CAP42336 1068 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 PAFAH1B1P43034 410 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 NOP2P46087 812 aaKnown RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 PDE6CP51160 858 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 ZNF132P52740 706 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 CRYBB1P53674 252 aaPredicted RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 IGBP1P78318 339 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 PURAQ00577 322 aaKnown RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 FMO1Q01740 532 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 DLX2Q07687 328 aaPredicted RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 BIRC3Q13489 604 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 TRPC3Q13507 836 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 RPS6KA1Q15418 735 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 ENOX2Q16206 610 aaKnown RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 ERCC6LQ2NKX8 1250 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 CFAP221Q4G0U5 840 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 GLE1Q53GS7 698 aaKnown RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 ZBTB41Q5SVQ8 909 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 CCSAPQ6IQ19 270 aaPredicted RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 ZBTB33Q86T24 672 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 NOP9Q86U38 636 aaKnown RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 SLC47A2Q86VL8 602 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 SESTD1Q86VW0 696 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 CRIPAKQ8N1N5 446 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 MMGT1Q8N4V1 131 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 UBR7Q8N806 425 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 MSANTD4Q8NCY6 345 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 KLHDC9Q8NEP7 349 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 FBXO22Q8NEZ5 403 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 OR5B17Q8NGF7 314 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 SLC35G2Q8TBE7 412 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 HNRNPLLQ8WVV9 542 aaKnown RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 NLRP7Q8WX94 980 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 KAT5Q92993 513 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 LENG1Q96BZ8 264 aaPredicted RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 TRIM11Q96F44 468 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 ANKRD36BP1Q96IX9 119 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 ACAP3Q96P50 834 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 OSBPL9Q96SU4 736 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 PCDHB18PQ96TA0 734 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 MTG1Q9BT17 334 aaPredicted RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 SELENOOQ9BVL4 669 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 ZNF518BQ9C0D4 1074 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 CDT1Q9H211 546 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 PDZD7Q9H5P4 517 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 NSUN3Q9H649 340 aaKnown RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 CYP3A43Q9HB55 503 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 AVENQ9NQS1 362 aaPredicted RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 TOPORSQ9NS56 1045 aaPredicted RBP5.78□□□□□ -1.48
COL17A1-206ENST00000483876 UVRAGQ9P2Y5 699 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 LCMT1Q9UIC8 334 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 RAB21Q9UL25 225 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 KIAA1257Q9ULG3 409 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 TFR2Q9UP52 801 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 CAPN6Q9Y6Q1 641 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 R4GN57 208 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 SPTBN2O15020 2390 aa5.78□□□□□ -1.48
COL17A1-206ENST00000483876 PTPRJQ12913 1337 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 C17orf102A2RUQ5 167 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 LACTBL1A8MY62 500 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 MIF4GDA9UHW6 222 aaKnown RBP5.77□□□□□ -1.49
COL17A1-206ENST00000483876 TULP1O00294 542 aaPredicted RBP5.77□□□□□ -1.49
COL17A1-206ENST00000483876 B4GALT5O43286 388 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 BUB1O43683 1085 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 CABYRO75952 493 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 LSM8O95777 96 aaKnown RBP5.77□□□□□ -1.49
COL17A1-206ENST00000483876 VTNP04004 478 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 ASGR1P07306 291 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 PAEPP09466 180 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 TMEM191BP0C7N4 346 aa5.77□□□□□ -1.49
COL17A1-206ENST00000483876 P4HA1P13674 534 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms