RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 RFPL2O75678 378 aa16.71■□□□□ 0.27
RPP40-206ENST00000483546 LRG1P02750 347 aa16.71■□□□□ 0.27
RPP40-206ENST00000483546 PRKCSHP14314 528 aaPredicted RBP16.71■□□□□ 0.27
RPP40-206ENST00000483546 MAPRE1Q15691 268 aaKnown RBP16.71■□□□□ 0.27
RPP40-206ENST00000483546 INTS6LQ5JSJ4 861 aaKnown RBP16.71■□□□□ 0.27
RPP40-206ENST00000483546 SASS6Q6UVJ0 657 aa16.71■□□□□ 0.27
RPP40-206ENST00000483546 RNF19BQ6ZMZ0 732 aa16.71■□□□□ 0.27
RPP40-206ENST00000483546 KBTBD7Q8WVZ9 684 aa16.71■□□□□ 0.27
RPP40-206ENST00000483546 APOL5Q9BWW9 433 aa16.71■□□□□ 0.27
RPP40-206ENST00000483546 NXF1Q9UBU9 619 aaKnown RBP16.71■□□□□ 0.27
RPP40-206ENST00000483546 CDH9Q9ULB4 789 aa16.71■□□□□ 0.27
RPP40-206ENST00000483546 USTQ9Y2C2 406 aa16.71■□□□□ 0.27
RPP40-206ENST00000483546 COQ4Q9Y3A0 265 aa16.71■□□□□ 0.27
RPP40-206ENST00000483546 NR2E1Q9Y466 385 aa16.71■□□□□ 0.27
RPP40-206ENST00000483546 INSL5Q9Y5Q6 135 aa16.71■□□□□ 0.27
RPP40-206ENST00000483546 CLSTN1O94985 981 aa16.7■□□□□ 0.26
RPP40-206ENST00000483546 OR4Q2P0C623 313 aa16.7■□□□□ 0.26
RPP40-206ENST00000483546 TUFMP49411 452 aaKnown RBP16.7■□□□□ 0.26
RPP40-206ENST00000483546 ZP2Q05996 745 aa16.7■□□□□ 0.26
RPP40-206ENST00000483546 CETN1Q12798 172 aa16.7■□□□□ 0.26
RPP40-206ENST00000483546 TPD52L1Q16890 204 aaPredicted RBP16.7■□□□□ 0.26
RPP40-206ENST00000483546 SLC39A12Q504Y0 691 aa16.7■□□□□ 0.26
RPP40-206ENST00000483546 FAM114A1Q8IWE2 563 aa16.7■□□□□ 0.26
RPP40-206ENST00000483546 TRIM59Q8IWR1 403 aa16.7■□□□□ 0.26
RPP40-206ENST00000483546 ELMOD1Q8N336 334 aa16.7■□□□□ 0.26
RPP40-206ENST00000483546 TTC39CQ8N584 583 aa16.7■□□□□ 0.26
RPP40-206ENST00000483546 TAS1R2Q8TE23 839 aa16.7■□□□□ 0.26
RPP40-206ENST00000483546 UHRF1Q96T88 793 aaPredicted RBP16.7■□□□□ 0.26
RPP40-206ENST00000483546 DNAI2Q9GZS0 605 aa16.7■□□□□ 0.26
RPP40-206ENST00000483546 SNX25Q9H3E2 840 aa16.7■□□□□ 0.26
RPP40-206ENST00000483546 MMRN2Q9H8L6 949 aa16.7■□□□□ 0.26
RPP40-206ENST00000483546 CYP3A43Q9HB55 503 aa16.7■□□□□ 0.26
RPP40-206ENST00000483546 WDR6Q9NNW5 1121 aaKnown RBP16.7■□□□□ 0.26
RPP40-206ENST00000483546 ABCB6Q9NP58 842 aa16.7■□□□□ 0.26
RPP40-206ENST00000483546 ANO10Q9NW15 660 aa16.7■□□□□ 0.26
RPP40-206ENST00000483546 RAB20Q9NX57 234 aa16.7■□□□□ 0.26
RPP40-206ENST00000483546 C19orf67A6NJJ6 358 aa16.69■□□□□ 0.26
RPP40-206ENST00000483546 SEC24AO95486 1093 aa16.69■□□□□ 0.26
RPP40-206ENST00000483546 TRIM21P19474 475 aaKnown RBP16.69■□□□□ 0.26
RPP40-206ENST00000483546 GNL1P36915 607 aaPredicted RBP16.69■□□□□ 0.26
RPP40-206ENST00000483546 NOP14P78316 857 aaKnown RBP16.69■□□□□ 0.26
RPP40-206ENST00000483546 C1QBPQ07021 282 aaKnown RBP16.69■□□□□ 0.26
RPP40-206ENST00000483546 STX1AQ16623 288 aa16.69■□□□□ 0.26
RPP40-206ENST00000483546 KLHL40Q2TBA0 621 aa16.69■□□□□ 0.26
RPP40-206ENST00000483546 WDR44Q5JSH3 913 aa16.69■□□□□ 0.26
RPP40-206ENST00000483546 OSTM1Q86WC4 334 aa16.69■□□□□ 0.26
RPP40-206ENST00000483546 LEMD2Q8NC56 503 aa16.69■□□□□ 0.26
RPP40-206ENST00000483546 FUBP3Q96I24 572 aaKnown RBP eCLIP16.69■□□□□ 0.26
RPP40-206ENST00000483546 TMEM209Q96SK2 561 aa16.69■□□□□ 0.26
RPP40-206ENST00000483546 SYT15Q9BQS2 421 aa16.69■□□□□ 0.26
RPP40-206ENST00000483546 BCO2Q9BYV7 579 aa16.69■□□□□ 0.26
RPP40-206ENST00000483546 NIF3L1Q9GZT8 377 aa16.69■□□□□ 0.26
RPP40-206ENST00000483546 POMKQ9H5K3 350 aa16.69■□□□□ 0.26
RPP40-206ENST00000483546 THAP9Q9H5L6 903 aa16.69■□□□□ 0.26
RPP40-206ENST00000483546 AVENQ9NQS1 362 aaPredicted RBP16.69■□□□□ 0.26
RPP40-206ENST00000483546 PCDHB5Q9Y5E4 795 aa16.69■□□□□ 0.26
RPP40-206ENST00000483546 CLUHO75153 1309 aa16.69■□□□□ 0.26
RPP40-206ENST00000483546 SPTBN5Q9NRC6 3674 aaKnown RBP16.68■□□□□ 0.26
RPP40-206ENST00000483546 VNN2O95498 520 aa16.68■□□□□ 0.26
RPP40-206ENST00000483546 ALDH1A3P47895 512 aa16.68■□□□□ 0.26
RPP40-206ENST00000483546 FMO5P49326 533 aa16.68■□□□□ 0.26
RPP40-206ENST00000483546 DUSP4Q13115 394 aa16.68■□□□□ 0.26
RPP40-206ENST00000483546 FAM171BQ6P995 826 aa16.68■□□□□ 0.26
RPP40-206ENST00000483546 C4orf50Q6ZRC1 276 aa16.68■□□□□ 0.26
RPP40-206ENST00000483546 OTOP3Q7RTS5 596 aa16.68■□□□□ 0.26
RPP40-206ENST00000483546 UNC93AQ86WB7 457 aa16.68■□□□□ 0.26
RPP40-206ENST00000483546 OR6B3Q8NGW1 331 aa16.68■□□□□ 0.26
RPP40-206ENST00000483546 TNIP3Q96KP6 325 aa16.68■□□□□ 0.26
RPP40-206ENST00000483546 PGLYRP2Q96PD5 576 aa16.68■□□□□ 0.26
RPP40-206ENST00000483546 MED15Q96RN5 788 aa16.68■□□□□ 0.26
RPP40-206ENST00000483546 PKMYT1Q99640 499 aa16.68■□□□□ 0.26
RPP40-206ENST00000483546 MRPL45Q9BRJ2 306 aaKnown RBP16.68■□□□□ 0.26
RPP40-206ENST00000483546 TMEM63CQ9P1W3 806 aa16.68■□□□□ 0.26
RPP40-206ENST00000483546 POLIQ9UNA4 740 aa16.68■□□□□ 0.26
RPP40-206ENST00000483546 YIPF1Q9Y548 306 aa16.68■□□□□ 0.26
RPP40-206ENST00000483546 ASB3Q9Y575 518 aa16.68■□□□□ 0.26
RPP40-206ENST00000483546 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.68■□□□□ 0.26
RPP40-206ENST00000483546 ZFP37Q9Y6Q3 630 aaPredicted RBP16.68■□□□□ 0.26
RPP40-206ENST00000483546 PTPRDP23468 1912 aa16.68■□□□□ 0.26
RPP40-206ENST00000483546 LOC730098B7Z3J9 87 aa16.67■□□□□ 0.26
RPP40-206ENST00000483546 CCL16O15467 120 aa16.67■□□□□ 0.26
RPP40-206ENST00000483546 LETM1O95202 739 aaPredicted RBP16.67■□□□□ 0.26
RPP40-206ENST00000483546 PTPN2P17706 415 aa16.67■□□□□ 0.26
RPP40-206ENST00000483546 ASPAP45381 313 aa16.67■□□□□ 0.26
RPP40-206ENST00000483546 EPHB3P54753 998 aa16.67■□□□□ 0.26
RPP40-206ENST00000483546 CFAP221Q4G0U5 840 aa16.67■□□□□ 0.26
RPP40-206ENST00000483546 CBWD6Q4V339 395 aa16.67■□□□□ 0.26
RPP40-206ENST00000483546 CBWD3Q5JTY5 395 aa16.67■□□□□ 0.26
RPP40-206ENST00000483546 CBWD5Q5RIA9 395 aa16.67■□□□□ 0.26
RPP40-206ENST00000483546 IQCEQ6IPM2 695 aa16.67■□□□□ 0.26
RPP40-206ENST00000483546 LRRTM3Q86VH5 581 aa16.67■□□□□ 0.26
RPP40-206ENST00000483546 GJD3Q8N144 294 aa16.67■□□□□ 0.26
RPP40-206ENST00000483546 PLCD3Q8N3E9 789 aa16.67■□□□□ 0.26
RPP40-206ENST00000483546 ATAD1Q8NBU5 361 aa16.67■□□□□ 0.26
RPP40-206ENST00000483546 ACSF2Q96CM8 615 aaPredicted RBP16.67■□□□□ 0.26
RPP40-206ENST00000483546 CNOT6LQ96LI5 555 aaKnown RBP16.67■□□□□ 0.26
RPP40-206ENST00000483546 CEP295NLQ96MC4 621 aa16.67■□□□□ 0.26
RPP40-206ENST00000483546 ZNF512Q96ME7 567 aaPredicted RBP16.67■□□□□ 0.26
RPP40-206ENST00000483546 SMYD3Q9H7B4 428 aa16.67■□□□□ 0.26
RPP40-206ENST00000483546 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms