RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 TFAP2BQ92481 460 aa16.01■□□□□ 0.15
PHGDH-205ENST00000482968 SYT11Q9BT88 431 aa16.01■□□□□ 0.15
PHGDH-205ENST00000482968 GPR62Q9BZJ7 368 aa16.01■□□□□ 0.15
PHGDH-205ENST00000482968 DPEP3Q9H4B8 488 aa16.01■□□□□ 0.15
PHGDH-205ENST00000482968 DDX43Q9NXZ2 648 aaKnown RBP16.01■□□□□ 0.15
PHGDH-205ENST00000482968 DDX3XO00571 662 aaKnown RBP eCLIP16■□□□□ 0.15
PHGDH-205ENST00000482968 TLL1O43897 1013 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 ACAT1P24752 427 aaKnown RBP16■□□□□ 0.15
PHGDH-205ENST00000482968 LHX1P48742 406 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 BMS1Q14692 1282 aaKnown RBP16■□□□□ 0.15
PHGDH-205ENST00000482968 SLC18A3Q16572 532 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 FAM171A1Q5VUB5 890 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 FIBCD1Q8N539 461 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 C12orf29Q8N999 325 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 ACRBPQ8NEB7 543 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 LNX1Q8TBB1 728 aaPredicted RBP16■□□□□ 0.15
PHGDH-205ENST00000482968 BCL7CQ8WUZ0 217 aaPredicted RBP16■□□□□ 0.15
PHGDH-205ENST00000482968 RAD9AQ99638 391 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 LPIN3Q9BQK8 851 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 ZSWIM1Q9BR11 485 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 DSEQ9UL01 958 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 PCDHB8Q9UN66 801 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 LAMA2P24043 3122 aaKnown RBP16■□□□□ 0.15
PHGDH-205ENST00000482968 ARHGEF37A1IGU5 675 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 EIF3CLB5ME19 914 aaKnown RBP16■□□□□ 0.15
PHGDH-205ENST00000482968 ATP2C2O75185 946 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 CYP11A1P05108 521 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 CFHP08603 1231 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 TKTP29401 623 aaKnown RBP16■□□□□ 0.15
PHGDH-205ENST00000482968 FMO1Q01740 532 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 SPA17Q15506 151 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 RASIP1Q5U651 963 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 SMYD5Q6GMV2 418 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 FUT10Q6P4F1 479 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 ZNF677Q86XU0 584 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 SLC30A5Q8TAD4 765 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 OLIG1Q8TAK6 271 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 RNPC3Q96LT9 517 aaKnown RBP16■□□□□ 0.15
PHGDH-205ENST00000482968 ZNF558Q96NG5 402 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 PCDHB18PQ96TA0 734 aa16■□□□□ 0.15
PHGDH-205ENST00000482968 EIF3CQ99613 913 aaKnown RBP16■□□□□ 0.15
PHGDH-205ENST00000482968 UQCRHLA0A096LP55 91 aa15.99■□□□□ 0.15
PHGDH-205ENST00000482968 TMCO5BA8MYB1 307 aa15.99■□□□□ 0.15
PHGDH-205ENST00000482968 ZNF263O14978 683 aa15.99■□□□□ 0.15
PHGDH-205ENST00000482968 UQCRHP07919 91 aa15.99■□□□□ 0.15
PHGDH-205ENST00000482968 VDRP11473 427 aa15.99■□□□□ 0.15
PHGDH-205ENST00000482968 LAG3P18627 525 aa15.99■□□□□ 0.15
PHGDH-205ENST00000482968 TYMPP19971 482 aa15.99■□□□□ 0.15
PHGDH-205ENST00000482968 RABGGTBP53611 331 aa15.99■□□□□ 0.15
PHGDH-205ENST00000482968 YWHAHQ04917 246 aaPredicted RBP15.99■□□□□ 0.15
PHGDH-205ENST00000482968 SGO2Q562F6 1265 aa15.99■□□□□ 0.15
PHGDH-205ENST00000482968 OVOS1Q6IE37 1185 aa15.99■□□□□ 0.15
PHGDH-205ENST00000482968 PALB2Q86YC2 1186 aa15.99■□□□□ 0.15
PHGDH-205ENST00000482968 CRYBG2Q8N1P7 616 aa15.99■□□□□ 0.15
PHGDH-205ENST00000482968 COLGALT1Q8NBJ5 622 aa15.99■□□□□ 0.15
PHGDH-205ENST00000482968 IGSF21Q96ID5 467 aa15.99■□□□□ 0.15
PHGDH-205ENST00000482968 PKNOX2Q96KN3 472 aa15.99■□□□□ 0.15
PHGDH-205ENST00000482968 B3GALT6Q96L58 329 aa15.99■□□□□ 0.15
PHGDH-205ENST00000482968 KIAA1257Q9ULG3 409 aa15.99■□□□□ 0.15
PHGDH-205ENST00000482968 ADGRG1Q9Y653 693 aa15.99■□□□□ 0.15
PHGDH-205ENST00000482968 SF3B1O75533 1304 aaKnown RBP eCLIP15.99■□□□□ 0.153e-8■■■■■ 86.2
PHGDH-205ENST00000482968 GRXCR1A8MXD5 290 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 IPO7O95373 1038 aaKnown RBP15.98■□□□□ 0.15
PHGDH-205ENST00000482968 CDR1P51861 262 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 PSMC1P62191 440 aaKnown RBP15.98■□□□□ 0.15
PHGDH-205ENST00000482968 CCDC122Q5T0U0 273 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 KIAA0319Q5VV43 1072 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 ALKBH5Q6P6C2 394 aaKnown RBP15.98■□□□□ 0.15
PHGDH-205ENST00000482968 TAS1R1Q7RTX1 841 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 DNAAF5Q86Y56 855 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 PASD1Q8IV76 773 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 THEM5Q8N1Q8 247 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 KIAA1524Q8TCG1 905 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 TNIP3Q96KP6 325 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 UBE2OQ9C0C9 1292 aaKnown RBP15.98■□□□□ 0.15
PHGDH-205ENST00000482968 DNAI2Q9GZS0 605 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 FAM49BQ9NUQ9 324 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 NAGPAQ9UK23 515 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 LCHNA4D1U4 455 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 H0YGN5 161 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 SYN3O14994 580 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 MED7O43513 233 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 LCA5LO95447 670 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 PTPN1P18031 435 aaKnown RBP15.98■□□□□ 0.15
PHGDH-205ENST00000482968 ANXA13P27216 316 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 KRT83P78385 493 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 ELAVL2Q12926 359 aaKnown RBP15.98■□□□□ 0.15
PHGDH-205ENST00000482968 PPP1R26Q5T8A7 1209 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-205ENST00000482968 SLC39A11Q8N1S5 342 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 C17orf53Q8N3J3 647 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-205ENST00000482968 B3GALNT2Q8NCR0 500 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 CYFIP2Q96F07 1278 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 RTP3Q9BQQ7 232 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 AAASQ9NRG9 546 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 TRMT1Q9NXH9 659 aaKnown RBP15.98■□□□□ 0.15
PHGDH-205ENST00000482968 TAS2R14Q9NYV8 317 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 SPG21Q9NZD8 308 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 REXO2Q9Y3B8 237 aaKnown RBP15.98■□□□□ 0.15
PHGDH-205ENST00000482968 PCDHB12Q9Y5F1 795 aa15.98■□□□□ 0.15
PHGDH-205ENST00000482968 CCDC175P0C221 793 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms