RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 RUNX3Q13761 415 aa7.26□□□□□ -1.25
CHD6-209ENST00000482596 HLA-BQ31612 363 aa7.26□□□□□ -1.25
CHD6-209ENST00000482596 LCE2AQ5TA79 106 aaPredicted RBP7.26□□□□□ -1.25
CHD6-209ENST00000482596 FBXL19Q6PCT2 694 aa7.26□□□□□ -1.25
CHD6-209ENST00000482596 CCDC81Q6ZN84 652 aa7.26□□□□□ -1.25
CHD6-209ENST00000482596 CCDC60Q8IWA6 550 aaPredicted RBP7.26□□□□□ -1.25
CHD6-209ENST00000482596 SAMD3Q8N6K7 520 aa7.26□□□□□ -1.25
CHD6-209ENST00000482596 USP33Q8TEY7 942 aa7.26□□□□□ -1.25
CHD6-209ENST00000482596 HMGB4Q8WW32 186 aa7.26□□□□□ -1.25
CHD6-209ENST00000482596 MAP7D2Q96T17 732 aa7.26□□□□□ -1.25
CHD6-209ENST00000482596 LRRCC1Q9C099 1032 aa7.26□□□□□ -1.25
CHD6-209ENST00000482596 NAPBQ9H115 298 aa7.26□□□□□ -1.25
CHD6-209ENST00000482596 EBF3Q9H4W6 596 aa7.26□□□□□ -1.25
CHD6-209ENST00000482596 PRM3Q9NNZ6 103 aa7.26□□□□□ -1.25
CHD6-209ENST00000482596 CEP72Q9P209 647 aa7.26□□□□□ -1.25
CHD6-209ENST00000482596 MMP17Q9ULZ9 603 aa7.26□□□□□ -1.25
CHD6-209ENST00000482596 SF3B1O75533 1304 aaKnown RBP eCLIP7.26□□□□□ -1.254e-7■■■■■ 86.2
CHD6-209ENST00000482596 CNTNAP2Q9UHC6 1331 aa7.26□□□□□ -1.25
CHD6-209ENST00000482596 IGKV6D-21A0A0A0MT36 114 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 A0A1W2PRU2 124 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 MAN1A2O60476 641 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 ATG7O95352 703 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 CLDN1O95832 211 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 MATKP42679 507 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 SLC26A2P50443 739 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 MCCD1P59942 119 aaPredicted RBP7.25□□□□□ -1.25
CHD6-209ENST00000482596 SPIRE1Q08AE8 756 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 DRP2Q13474 957 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 MTMR1Q13613 665 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 EML3Q32P44 896 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 UBXN11Q5T124 520 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 ZSCAN25Q6NSZ9 544 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 RTL10Q7L3V2 364 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 TICAM2Q86XR7 235 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 SMG8Q8ND04 991 aaKnown RBP7.25□□□□□ -1.25
CHD6-209ENST00000482596 BPIFB1Q8TDL5 484 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 SSC4DQ8WTU2 575 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 ZNF578Q96N58 590 aaPredicted RBP7.25□□□□□ -1.25
CHD6-209ENST00000482596 SEC62Q99442 399 aaKnown RBP7.25□□□□□ -1.25
CHD6-209ENST00000482596 SEMA3CQ99985 751 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 FAM83CQ9BQN1 747 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 DPH1Q9BZG8 443 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 API5Q9BZZ5 524 aaKnown RBP7.25□□□□□ -1.25
CHD6-209ENST00000482596 ZDHHC5Q9C0B5 715 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 SMG9Q9H0W8 520 aaKnown RBP7.25□□□□□ -1.25
CHD6-209ENST00000482596 TOMM22Q9NS69 142 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 TNNQ9UQP3 1299 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 PCDHGB2Q9Y5G2 931 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 PHLPP2Q6ZVD8 1323 aa7.25□□□□□ -1.25
CHD6-209ENST00000482596 TACC2O95359 2948 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 A0A087WZ62 844 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 PRRG1O14668 218 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 BACH1O14867 736 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 FOXP2O15409 715 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 EFSO43281 561 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 ORC4O43929 436 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 PPFIA2O75334 1257 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 ALDH1A2O94788 518 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 KIF4AO95239 1232 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 CER1O95813 267 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 MPOP05164 745 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 GNAT2P19087 354 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 IGFBP6P24592 240 aaPredicted RBP7.24□□□□□ -1.25
CHD6-209ENST00000482596 GJA4P35212 333 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 UQCRFS1P47985 274 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 OXCT1P55809 520 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 PTPAQ15257 358 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 ARL13BQ3SXY8 428 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 ALDH1L2Q3SY69 923 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 USP17L6PQ6QN14 398 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 MAMDC2Q7Z304 686 aaPredicted RBP7.24□□□□□ -1.25
CHD6-209ENST00000482596 PGBD3Q8N328 593 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 STAG2Q8N3U4 1231 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 ZNF592Q92610 1267 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 APPBP2Q92624 585 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 MTMR8Q96EF0 704 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 CDHR1Q96JP9 859 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 FDXACB1Q9BRP7 624 aaPredicted RBP7.24□□□□□ -1.25
CHD6-209ENST00000482596 ZKSCAN3Q9BRR0 538 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 MTRRQ9UBK8 725 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 DKK3Q9UBP4 350 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 TBX20Q9UMR3 447 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 HES2Q9Y543 173 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 PCDHB1Q9Y5F3 818 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 INSL5Q9Y5Q6 135 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 UBIAD1Q9Y5Z9 338 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 ANK1P16157 1881 aa7.24□□□□□ -1.25
CHD6-209ENST00000482596 PALM3A6NDB9 673 aaPredicted RBP7.23□□□□□ -1.25
CHD6-209ENST00000482596 K7EQS6 105 aa7.23□□□□□ -1.25
CHD6-209ENST00000482596 SGK1O00141 431 aa7.23□□□□□ -1.25
CHD6-209ENST00000482596 ZBTB5O15062 677 aa7.23□□□□□ -1.25
CHD6-209ENST00000482596 SEMA7AO75326 666 aa7.23□□□□□ -1.25
CHD6-209ENST00000482596 RFPL3O75679 317 aa7.23□□□□□ -1.25
CHD6-209ENST00000482596 RECQL4O94761 1208 aa7.23□□□□□ -1.25
CHD6-209ENST00000482596 CLSTN1O94985 981 aa7.23□□□□□ -1.25
CHD6-209ENST00000482596 CCNE2O96020 404 aa7.23□□□□□ -1.25
CHD6-209ENST00000482596 IFIT2P09913 472 aaKnown RBP7.23□□□□□ -1.25
CHD6-209ENST00000482596 SFPQP23246 707 aaKnown RBP eCLIP7.23□□□□□ -1.252e-6■■■□□ 15.2
CHD6-209ENST00000482596 GLDCP23378 1020 aa7.23□□□□□ -1.25
CHD6-209ENST00000482596 CASRP41180 1078 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms