RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 MGEA5O60502 916 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 FTLP02792 175 aaPredicted RBP3.72□□□□□ -1.81
SMC6-208ENST00000481708 CIITAP33076 1130 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 CLCN2P51788 898 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 SUMO3P55854 103 aaPredicted RBP3.72□□□□□ -1.81
SMC6-208ENST00000481708 RAB30Q15771 203 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 SHROOM1Q2M3G4 852 aaPredicted RBP3.72□□□□□ -1.81
SMC6-208ENST00000481708 CNKSR3Q6P9H4 555 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 Q6ZS46 218 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 ADGRA1Q86SQ6 560 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 MICU3Q86XE3 530 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 SMYD4Q8IYR2 804 aaPredicted RBP3.72□□□□□ -1.81
SMC6-208ENST00000481708 SPAG5Q96R06 1193 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 P2RX7Q99572 595 aaKnown RBP3.72□□□□□ -1.81
SMC6-208ENST00000481708 CATSPERZQ9NTU4 200 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 DECR2Q9NUI1 292 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 ADD3Q9UEY8 706 aaKnown RBP3.72□□□□□ -1.81
SMC6-208ENST00000481708 C19orf53Q9UNZ5 99 aaPredicted RBP3.72□□□□□ -1.81
SMC6-208ENST00000481708 NAALADL1Q9UQQ1 740 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 UTRNP46939 3433 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 A0A1W2PPC1 479 aa3.71□□□□□ -1.81
SMC6-208ENST00000481708 NOGQ13253 232 aa3.71□□□□□ -1.81
SMC6-208ENST00000481708 TRIM28Q13263 835 aaKnown RBP3.71□□□□□ -1.81
SMC6-208ENST00000481708 ARHGAP36Q6ZRI8 547 aa3.71□□□□□ -1.81
SMC6-208ENST00000481708 C15orf52Q6ZUT6 534 aaKnown RBP3.71□□□□□ -1.81
SMC6-208ENST00000481708 USP49Q70CQ1 688 aa3.71□□□□□ -1.81
SMC6-208ENST00000481708 C2CD5Q86YS7 1000 aa3.71□□□□□ -1.81
SMC6-208ENST00000481708 FAM71BQ8TC56 605 aa3.71□□□□□ -1.81
SMC6-208ENST00000481708 PIGBQ92521 554 aa3.71□□□□□ -1.81
SMC6-208ENST00000481708 HOXB13Q92826 284 aaPredicted RBP3.71□□□□□ -1.81
SMC6-208ENST00000481708 SP110Q9HB58 689 aa3.71□□□□□ -1.81
SMC6-208ENST00000481708 MEFVO15553 781 aaPredicted RBP3.71□□□□□ -1.82
SMC6-208ENST00000481708 SIGLEC6O43699 453 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 HTATSF1O43719 755 aaKnown RBP3.71□□□□□ -1.82
SMC6-208ENST00000481708 RNGTTO60942 597 aaKnown RBP3.71□□□□□ -1.82
SMC6-208ENST00000481708 ADSLP30566 484 aaPredicted RBP3.71□□□□□ -1.82
SMC6-208ENST00000481708 ARFIP2P53365 341 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 MRPS9P82933 396 aaKnown RBP3.71□□□□□ -1.82
SMC6-208ENST00000481708 CTXN3Q4LDR2 81 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 FDX2Q6P4F2 183 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 GALNTL5Q7Z4T8 443 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 ATP11CQ8NB49 1132 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 MUL1Q969V5 352 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 ATP6V1E2Q96A05 226 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 TWNKQ96RR1 684 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 NTPCRQ9BSD7 190 aaKnown RBP3.71□□□□□ -1.82
SMC6-208ENST00000481708 NSMCE4AQ9NXX6 385 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 FBXL21Q9UKT6 434 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 FAM90A27PA6NNH2 459 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 CYP19A1P11511 503 aaPredicted RBP3.71□□□□□ -1.82
SMC6-208ENST00000481708 IDEP14735 1019 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 RAB6AP20340 208 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 TNNT3P45378 269 aaPredicted RBP3.71□□□□□ -1.82
SMC6-208ENST00000481708 HNRNPUQ00839 825 aaKnown RBP eCLIP3.71□□□□□ -1.82
SMC6-208ENST00000481708 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.71□□□□□ -1.82
SMC6-208ENST00000481708 CPNE8Q86YQ8 564 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 ADAMTS15Q8TE58 950 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 DCAF11Q8TEB1 546 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 TBC1D22AQ8WUA7 517 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 ZNF764Q96H86 408 aaPredicted RBP3.71□□□□□ -1.82
SMC6-208ENST00000481708 SAMD11Q96NU1 681 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 ALG1Q9BT22 464 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 SMURF2Q9HAU4 748 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 HAUS2Q9NVX0 235 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 VPS28Q9UK41 221 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 MKL2Q9ULH7 1088 aa3.71□□□□□ -1.82
SMC6-208ENST00000481708 SLC12A8A0AV02 714 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 C6P13671 934 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 NOS3P29474 1203 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 ADRM1Q16186 407 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 MAP3K21Q5TCX8 1036 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 ANKRD45Q5TZF3 282 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 ANKRD34AQ69YU3 496 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 IQCEQ6IPM2 695 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 JAKMIP2Q96AA8 810 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 FERMT2Q96AC1 680 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 PERPQ96FX8 193 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 ACAP3Q96P50 834 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 VRK1Q99986 396 aaPredicted RBP3.7□□□□□ -1.82
SMC6-208ENST00000481708 HDAC8Q9BY41 377 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 FOXQ1Q9C009 403 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 PIDD1Q9HB75 910 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 RC3H2Q9HBD1 1191 aaKnown RBP3.7□□□□□ -1.82
SMC6-208ENST00000481708 HERC5Q9UII4 1024 aaKnown RBP3.7□□□□□ -1.82
SMC6-208ENST00000481708 SLC13A4Q9UKG4 626 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 hCG_1807616A0A1W2PRN6 198 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 ZBED4O75132 1171 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 LRIG2O94898 1065 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 PFKMP08237 780 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 HK3P52790 923 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 UGT8Q16880 541 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 SGO2Q562F6 1265 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 KLHDC10Q6PID8 442 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 SEZ6L2Q6UXD5 910 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 CDC37L1Q7L3B6 337 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 CATSPER4Q7RTX7 472 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 CREG2Q8IUH2 290 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 CRACR2BQ8N4Y2 399 aaPredicted RBP3.7□□□□□ -1.82
SMC6-208ENST00000481708 FBLIM1Q8WUP2 373 aa3.7□□□□□ -1.82
SMC6-208ENST00000481708 SEPT1Q8WYJ6 367 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms