RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 TTPALQ9BTX7 342 aa6.29□□□□□ -1.4
CPS1-207ENST00000479988 FAM114A2Q9NRY5 505 aa6.29□□□□□ -1.4
CPS1-207ENST00000479988 IRAK4Q9NWZ3 460 aa6.29□□□□□ -1.4
CPS1-207ENST00000479988 KLHL42Q9P2K6 505 aa6.29□□□□□ -1.4
CPS1-207ENST00000479988 MYH15Q9Y2K3 1946 aa6.29□□□□□ -1.4
CPS1-207ENST00000479988 KRIT1O00522 736 aa6.29□□□□□ -1.4
CPS1-207ENST00000479988 ATP1A1P05023 1023 aaKnown RBP6.29□□□□□ -1.4
CPS1-207ENST00000479988 RPL9P32969 192 aaKnown RBP6.29□□□□□ -1.4
CPS1-207ENST00000479988 SOX5P35711 763 aa6.29□□□□□ -1.4
CPS1-207ENST00000479988 ACADSBP45954 432 aa6.29□□□□□ -1.4
CPS1-207ENST00000479988 SARNPP82979 210 aaKnown RBP6.29□□□□□ -1.4
CPS1-207ENST00000479988 CUL1Q13616 776 aa6.29□□□□□ -1.4
CPS1-207ENST00000479988 NFIL3Q16649 462 aa6.29□□□□□ -1.4
CPS1-207ENST00000479988 PRPF38BQ5VTL8 546 aaKnown RBP6.29□□□□□ -1.4
CPS1-207ENST00000479988 SPATA4Q8NEY3 305 aa6.29□□□□□ -1.4
CPS1-207ENST00000479988 SPIRE2Q8WWL2 714 aa6.29□□□□□ -1.4
CPS1-207ENST00000479988 COL2A1P02458 1487 aaPredicted RBP6.29□□□□□ -1.4
CPS1-207ENST00000479988 PITPNM1O00562 1244 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 ARHGAP25P42331 645 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 FMO5P49326 533 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 CALCOCO2Q13137 446 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 NNTQ13423 1086 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 CDH18Q13634 790 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 MIIPQ5JXC2 388 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 DCLRE1AQ6PJP8 1040 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 GET4Q7L5D6 327 aaPredicted RBP6.28□□□□□ -1.4
CPS1-207ENST00000479988 KIAA0319LQ8IZA0 1049 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 CCNYQ8ND76 341 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 SPOCK3Q9BQ16 436 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 CCDC77Q9BR77 488 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 NIF3L1Q9GZT8 377 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 CCDC68Q9H2F9 335 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 CENPHQ9H3R5 247 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 LCMT1Q9UIC8 334 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 PLA2G4CQ9UP65 541 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 NR2E1Q9Y466 385 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 NT5C1B-RDH14C9J2C7 533 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 ATP9AO75110 1047 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 AP1G2O75843 785 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 SEC31AO94979 1220 aaKnown RBP6.28□□□□□ -1.4
CPS1-207ENST00000479988 SLC2A3P11169 496 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 MAN1A1P33908 653 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 GFPT1Q06210 699 aaPredicted RBP6.28□□□□□ -1.4
CPS1-207ENST00000479988 MAMDC4Q6UXC1 1216 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 KCNK18Q7Z418 384 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 KSR1Q8IVT5 923 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 CLEC4DQ8WXI8 215 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 SNX19Q92543 992 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 ZNF653Q96CK0 615 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 TOX2Q96NM4 488 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 SIK2Q9H0K1 926 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 FBXO44Q9H4M3 255 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 PDE11AQ9HCR9 933 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 SEPT10Q9P0V9 454 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 ARHGAP20Q9P2F6 1191 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 SCINQ9Y6U3 715 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 SLX4Q8IY92 1834 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 A0A0A6YYK5 440 aaPredicted RBP6.28□□□□□ -1.4
CPS1-207ENST00000479988 CES2O00748 559 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 SPTLC1O15269 473 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 PALMO75781 387 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 ZMYND10O75800 440 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 ALDH1A2O94788 518 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 KCNA5P22460 613 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 CALRP27797 417 aaKnown RBP6.28□□□□□ -1.4
CPS1-207ENST00000479988 MTHFRP42898 656 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 COG7P83436 770 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 TRIM32Q13049 653 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 PPP1R7Q15435 360 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 EFHC2Q5JST6 749 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 BZW1Q7L1Q6 419 aaKnown RBP6.28□□□□□ -1.4
CPS1-207ENST00000479988 ZNF720Q7Z2F6 126 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 CHSY1Q86X52 802 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 RGL4Q8IZJ4 473 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 TDHQ8IZJ6 230 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 RFFLQ8WZ73 363 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 TBC1D31Q96DN5 1066 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 SYT15Q9BQS2 421 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 CIPCQ9C0C6 399 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 NKX2-4Q9H2Z4 354 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 ITGA11Q9UKX5 1188 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 PHF24Q9UPV7 400 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 FRMPD4Q14CM0 1322 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 PTPRZ1P23471 2315 aaPredicted RBP6.28□□□□□ -1.4
CPS1-207ENST00000479988 COL5A3P25940 1745 aaPredicted RBP6.28□□□□□ -1.4
CPS1-207ENST00000479988 PPP1R11O60927 126 aaPredicted RBP6.28□□□□□ -1.4
CPS1-207ENST00000479988 PSMD10O75832 226 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 RTN3O95197 1032 aaPredicted RBP6.28□□□□□ -1.4
CPS1-207ENST00000479988 SNAI1O95863 264 aaPredicted RBP6.28□□□□□ -1.4
CPS1-207ENST00000479988 CALB1P05937 261 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 CSH1P0DML2 217 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 CSH2P0DML3 217 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 CXCL8P10145 99 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 LCP1P13796 627 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 CDC25CP30307 473 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 GNA15P30679 374 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 ARHGAP1Q07960 439 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 DRAP1Q14919 205 aaPredicted RBP6.28□□□□□ -1.4
CPS1-207ENST00000479988 KIAA1755Q5JYT7 1200 aa6.28□□□□□ -1.4
CPS1-207ENST00000479988 MORN1Q5T089 497 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms