RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 BEST2Q8NFU1 509 aa12.18□□□□□ -0.46
CCDC18-208ENST00000479653 CCDC26Q8TAB7 109 aa12.18□□□□□ -0.46
CCDC18-208ENST00000479653 CEP76Q8TAP6 659 aa12.18□□□□□ -0.46
CCDC18-208ENST00000479653 C18orf25Q96B23 403 aaPredicted RBP12.18□□□□□ -0.46
CCDC18-208ENST00000479653 ZMAT2Q96NC0 199 aaKnown RBP12.18□□□□□ -0.46
CCDC18-208ENST00000479653 LPIN3Q9BQK8 851 aa12.18□□□□□ -0.46
CCDC18-208ENST00000479653 BCCIPQ9P287 314 aaKnown RBP eCLIP12.18□□□□□ -0.46
CCDC18-208ENST00000479653 PILRBQ9UKJ0 227 aa12.18□□□□□ -0.46
CCDC18-208ENST00000479653 TBX20Q9UMR3 447 aa12.18□□□□□ -0.46
CCDC18-208ENST00000479653 PCDHB8Q9UN66 801 aa12.18□□□□□ -0.46
CCDC18-208ENST00000479653 APOBEC2Q9Y235 224 aaKnown RBP12.18□□□□□ -0.46
CCDC18-208ENST00000479653 ATG2BQ96BY7 2078 aa12.18□□□□□ -0.46
CCDC18-208ENST00000479653 URB1O60287 2271 aaKnown RBP12.17□□□□□ -0.46
CCDC18-208ENST00000479653 J3QKU1 62 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 M0R2N6 131 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 LYPLA2O95372 231 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 CPA1P15085 419 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 IFNAR1P17181 557 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 P2RY2P41231 377 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 CCT2P78371 535 aaKnown RBP12.17□□□□□ -0.46
CCDC18-208ENST00000479653 GPR17Q13304 367 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 VEPH1Q14D04 833 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 PDGFRLQ15198 375 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 NTRK3Q16288 839 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 LMBRD2Q68DH5 695 aaPredicted RBP12.17□□□□□ -0.46
CCDC18-208ENST00000479653 ALKAL1Q6UXT8 129 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 NEK8Q86SG6 692 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 PGBD3Q8N328 593 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 CPA6Q8N4T0 437 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 TTC9BQ8N6N2 239 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 MAB21L3Q8N8X9 362 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 MCPH1Q8NEM0 835 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 PIP4K2CQ8TBX8 421 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 USP13Q92995 863 aaPredicted RBP12.17□□□□□ -0.46
CCDC18-208ENST00000479653 SEPT5Q99719 369 aaPredicted RBP12.17□□□□□ -0.46
CCDC18-208ENST00000479653 HSD17B14Q9BPX1 270 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 ESYT1Q9BSJ8 1104 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 ECT2Q9H8V3 914 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 POLMQ9NP87 494 aaPredicted RBP12.17□□□□□ -0.46
CCDC18-208ENST00000479653 TDP1Q9NUW8 608 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 EML5Q05BV3 1969 aa12.17□□□□□ -0.46
CCDC18-208ENST00000479653 ARHGAP33O14559 1287 aa12.16□□□□□ -0.46
CCDC18-208ENST00000479653 ATXN7O15265 892 aaPredicted RBP12.16□□□□□ -0.46
CCDC18-208ENST00000479653 OAZ2O95190 189 aa12.16□□□□□ -0.46
CCDC18-208ENST00000479653 SERPINF2P08697 491 aa12.16□□□□□ -0.46
CCDC18-208ENST00000479653 GCFC2P16383 781 aaKnown RBP12.16□□□□□ -0.46
CCDC18-208ENST00000479653 HSPA4P34932 840 aa12.16□□□□□ -0.46
CCDC18-208ENST00000479653 GRM5P41594 1212 aa12.16□□□□□ -0.46
CCDC18-208ENST00000479653 ABCG1P45844 678 aa12.16□□□□□ -0.46
CCDC18-208ENST00000479653 CRY1Q16526 586 aa12.16□□□□□ -0.46
CCDC18-208ENST00000479653 XKR4Q5GH76 650 aa12.16□□□□□ -0.46
CCDC18-208ENST00000479653 NT5DC1Q5TFE4 455 aa12.16□□□□□ -0.46
CCDC18-208ENST00000479653 TOGARAM2Q6ZUX3 1019 aa12.16□□□□□ -0.46
CCDC18-208ENST00000479653 SLFN12Q8IYM2 578 aa12.16□□□□□ -0.46
CCDC18-208ENST00000479653 TRIM22Q8IYM9 498 aa12.16□□□□□ -0.46
CCDC18-208ENST00000479653 RASEFQ8IZ41 740 aa12.16□□□□□ -0.46
CCDC18-208ENST00000479653 OLIG1Q8TAK6 271 aa12.16□□□□□ -0.46
CCDC18-208ENST00000479653 USP33Q8TEY7 942 aa12.16□□□□□ -0.46
CCDC18-208ENST00000479653 GIPC2Q8TF65 315 aa12.16□□□□□ -0.46
CCDC18-208ENST00000479653 BSNDQ8WZ55 320 aa12.16□□□□□ -0.46
CCDC18-208ENST00000479653 NACC1Q96RE7 527 aa12.16□□□□□ -0.46
CCDC18-208ENST00000479653 KIFC3Q9BVG8 833 aa12.16□□□□□ -0.46
CCDC18-208ENST00000479653 OXCT2Q9BYC2 517 aaPredicted RBP12.16□□□□□ -0.46
CCDC18-208ENST00000479653 CCDC113Q9H0I3 377 aa12.16□□□□□ -0.46
CCDC18-208ENST00000479653 NCOA5Q9HCD5 579 aaKnown RBP12.16□□□□□ -0.46
CCDC18-208ENST00000479653 DUS2Q9NX74 493 aaKnown RBP12.16□□□□□ -0.46
CCDC18-208ENST00000479653 A0A087WV48 116 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 MTMR11A4FU01 709 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 ANTXRLA6NF34 631 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 TRABD2BA6NFA1 517 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 OR6C75A6NL08 312 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 EPB41L2O43491 1005 aaKnown RBP12.15□□□□□ -0.46
CCDC18-208ENST00000479653 SYPP08247 313 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 HMGB1P09429 215 aaKnown RBP12.15□□□□□ -0.46
CCDC18-208ENST00000479653 NAMPTP43490 491 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 SSRP1Q08945 709 aaKnown RBP12.15□□□□□ -0.46
CCDC18-208ENST00000479653 NBR1Q14596 966 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 MGAT5BQ3V5L5 792 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 ARMCX5Q6P1M9 558 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 SLCO6A1Q86UG4 719 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 MARCH9Q86YJ5 346 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 NAXDQ8IW45 347 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 SCUBE3Q8IX30 993 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 ZNF843Q8N446 348 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 WHAMMQ8TF30 809 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 ACAP3Q96P50 834 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 PNMA5Q96PV4 448 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 TCHPQ9BT92 498 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 IL21Q9HBE4 155 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 POLD4Q9HCU8 107 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 DNAAF2Q9NVR5 837 aaKnown RBP12.15□□□□□ -0.46
CCDC18-208ENST00000479653 MMP17Q9ULZ9 603 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 PCDHA12Q9UN75 941 aa12.15□□□□□ -0.46
CCDC18-208ENST00000479653 NUP205Q92621 2012 aa12.15□□□□□ -0.47
CCDC18-208ENST00000479653 AP5Z1O43299 807 aa12.14□□□□□ -0.47
CCDC18-208ENST00000479653 XRCC6P12956 609 aaKnown RBP eCLIP12.14□□□□□ -0.47
CCDC18-208ENST00000479653 KCNE1P15382 129 aa12.14□□□□□ -0.47
CCDC18-208ENST00000479653 NMT1P30419 496 aaKnown RBP12.14□□□□□ -0.47
CCDC18-208ENST00000479653 HOXD12P35452 270 aa12.14□□□□□ -0.47
CCDC18-208ENST00000479653 IFNAR2P48551 515 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 231 ms