RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 MCEEQ96PE7 176 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 CPXM1Q96SM3 734 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 LPIN3Q9BQK8 851 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 BCO2Q9BYV7 579 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 UBXN6Q9BZV1 441 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 WNT8AQ9H1J5 351 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 MRPL47Q9HD33 250 aaKnown RBP4.38□□□□□ -1.71
USP25-208ENST00000478932 AVENQ9NQS1 362 aaPredicted RBP4.38□□□□□ -1.71
USP25-208ENST00000478932 GDF3Q9NR23 364 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 PARVAQ9NVD7 372 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 KLHL11Q9NVR0 708 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 CACNG4Q9UBN1 327 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 TUBGCP4Q9UGJ1 667 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 TTC7AQ9ULT0 858 aaPredicted RBP4.38□□□□□ -1.71
USP25-208ENST00000478932 HPCAL4Q9UM19 191 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 TLL2Q9Y6L7 1015 aa4.38□□□□□ -1.71
USP25-208ENST00000478932 SMIM28A0A1B0GU29 152 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 GOLGA6BA6NDN3 693 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 TMEM191CA6NGB0 347 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 PI4K2BG5E9Z4 385 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 CCDC188H7C350 402 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 AGPSO00116 658 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 TULP2O00295 520 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 DUSP11O75319 330 aaKnown RBP4.37□□□□□ -1.71
USP25-208ENST00000478932 CILPO75339 1184 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 PROSCO94903 275 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 IGHA2P01877 340 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 PDGFRBP09619 1106 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 MYBL1P10243 752 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 RALAP11233 206 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 GRM5P41594 1212 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 RBP5P82980 135 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 DR1Q01658 176 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 OGDHQ02218 1023 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 ADCY2Q08462 1091 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 SREBF2Q12772 1141 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 PTPN20Q4JDL3 420 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 KCNT1Q5JUK3 1230 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 LIN9Q5TKA1 542 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 TXNRD3NBQ6F5E7 133 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 TWF2Q6IBS0 349 aaKnown RBP4.37□□□□□ -1.71
USP25-208ENST00000478932 TTC27Q6P3X3 843 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 NOTUMQ6P988 496 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 TRIM72Q6ZMU5 477 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 ACOT1Q86TX2 421 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 SLC13A5Q86YT5 568 aaPredicted RBP4.37□□□□□ -1.71
USP25-208ENST00000478932 CCDC50Q8IVM0 306 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 SCUBE3Q8IX30 993 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 CCDC105Q8IYK2 499 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 EMC1Q8N766 993 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 ARRDC4Q8NCT1 418 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 SOCS4Q8WXH5 440 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 TMEM176AQ96HP8 235 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 VCPIP1Q96JH7 1222 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 NAP1L3Q99457 506 aaPredicted RBP4.37□□□□□ -1.71
USP25-208ENST00000478932 NEUROG2Q9H2A3 272 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 SYNCQ9H7C4 482 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 FAM49BQ9NUQ9 324 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 RNF186Q9NXI6 227 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 VPS18Q9P253 973 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 PARP2Q9UGN5 583 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 C2CD2Q9Y426 696 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 GOLGA6L10A0A0M3HER8 536 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 C17orf102A2RUQ5 167 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 TMEM88BA6NKF7 163 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 SPTLC1O15269 473 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 TRPA1O75762 1119 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 GRAP2O75791 330 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 SYF2O95926 243 aaKnown RBP4.37□□□□□ -1.71
USP25-208ENST00000478932 KRT3P12035 628 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 KRT10P13645 584 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 LMO2P25791 158 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 ECHS1P30084 290 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 GPD2P43304 727 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 YARSP54577 528 aaKnown RBP4.37□□□□□ -1.71
USP25-208ENST00000478932 EPHB4P54760 987 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 PLTPP55058 493 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 CDC42EP1Q00587 391 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 PPARDQ03181 441 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 PTPN11Q06124 597 aaPredicted RBP4.37□□□□□ -1.71
USP25-208ENST00000478932 SOX4Q06945 474 aaPredicted RBP4.37□□□□□ -1.71
USP25-208ENST00000478932 CACNB2Q08289 660 aaPredicted RBP4.37□□□□□ -1.71
USP25-208ENST00000478932 ZNF252P-AS1Q0IIN9 211 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 MYO1EQ12965 1108 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 TERF2Q15554 542 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 ZBTB6Q15916 424 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 SOWAHAQ2M3V2 549 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 SMTNL2Q2TAL5 461 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 HSP90B2PQ58FF3 399 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 ZNF618Q5T7W0 954 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 KAZNQ674X7 775 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 GDF6Q6KF10 455 aaPredicted RBP4.37□□□□□ -1.71
USP25-208ENST00000478932 EMBQ6PCB8 327 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 CCDC137Q6PK04 289 aaKnown RBP4.37□□□□□ -1.71
USP25-208ENST00000478932 ALKAL1Q6UXT8 129 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 CCDC26Q8TAB7 109 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 FEZF2Q8TBJ5 459 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 TRIM11Q96F44 468 aa4.37□□□□□ -1.71
USP25-208ENST00000478932 DDX27Q96GQ7 796 aaKnown RBP4.37□□□□□ -1.71
USP25-208ENST00000478932 PIWIL1Q96J94 861 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms