RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 ASIC1P78348 528 aa24.58■■□□□ 1.53
C9orf3-216ENST00000478603 CYP4F8P98187 520 aa24.58■■□□□ 1.53
C9orf3-216ENST00000478603 BFSP1Q12934 665 aa24.58■■□□□ 1.53
C9orf3-216ENST00000478603 VEPH1Q14D04 833 aa24.58■■□□□ 1.53
C9orf3-216ENST00000478603 HSCBQ8IWL3 235 aa24.58■■□□□ 1.53
C9orf3-216ENST00000478603 GPD1LQ8N335 351 aa24.58■■□□□ 1.53
C9orf3-216ENST00000478603 PDCL2Q8N4E4 241 aa24.58■■□□□ 1.53
C9orf3-216ENST00000478603 MTMR12Q9C0I1 747 aa24.58■■□□□ 1.53
C9orf3-216ENST00000478603 LRRC27Q9C0I9 530 aa24.58■■□□□ 1.53
C9orf3-216ENST00000478603 L1RE1Q9UN81 338 aa24.58■■□□□ 1.53
C9orf3-216ENST00000478603 PIAS3Q9Y6X2 628 aa24.58■■□□□ 1.53
C9orf3-216ENST00000478603 NCAM2O15394 837 aa24.57■■□□□ 1.52
C9orf3-216ENST00000478603 LMNAP02545 664 aaKnown RBP24.57■■□□□ 1.52
C9orf3-216ENST00000478603 HAPLN1P10915 354 aaPredicted RBP24.57■■□□□ 1.52
C9orf3-216ENST00000478603 HOXD13P35453 343 aa24.57■■□□□ 1.52
C9orf3-216ENST00000478603 MAGEA9P43362 315 aa24.57■■□□□ 1.52
C9orf3-216ENST00000478603 YAF2Q8IY57 180 aa24.57■■□□□ 1.52
C9orf3-216ENST00000478603 DCP1BQ8IZD4 617 aaKnown RBP24.57■■□□□ 1.52
C9orf3-216ENST00000478603 SPPL2BQ8TCT7 592 aa24.57■■□□□ 1.52
C9orf3-216ENST00000478603 C2orf15Q8WU43 125 aaKnown RBP24.57■■□□□ 1.52
C9orf3-216ENST00000478603 E2F7Q96AV8 911 aa24.57■■□□□ 1.52
C9orf3-216ENST00000478603 CUEDC2Q9H467 287 aa24.57■■□□□ 1.52
C9orf3-216ENST00000478603 IL21Q9HBE4 155 aa24.57■■□□□ 1.52
C9orf3-216ENST00000478603 TRPV5Q9NQA5 729 aa24.57■■□□□ 1.52
C9orf3-216ENST00000478603 SIX4Q9UIU6 781 aa24.57■■□□□ 1.52
C9orf3-216ENST00000478603 ITGA11Q9UKX5 1188 aa24.57■■□□□ 1.52
C9orf3-216ENST00000478603 ZNF638Q14966 1978 aaKnown RBP24.56■■□□□ 1.52
C9orf3-216ENST00000478603 ARNTLO00327 626 aa24.56■■□□□ 1.52
C9orf3-216ENST00000478603 MAN2B1O00754 1011 aa24.56■■□□□ 1.52
C9orf3-216ENST00000478603 FGF19O95750 216 aa24.56■■□□□ 1.52
C9orf3-216ENST00000478603 F13A1P00488 732 aa24.56■■□□□ 1.52
C9orf3-216ENST00000478603 HSP90AA1P07900 732 aaKnown RBP24.56■■□□□ 1.52
C9orf3-216ENST00000478603 TMEM191BP0C7N4 346 aa24.56■■□□□ 1.52
C9orf3-216ENST00000478603 ZSCAN22P10073 491 aaPredicted RBP24.56■■□□□ 1.52
C9orf3-216ENST00000478603 ACAT1P24752 427 aaKnown RBP24.56■■□□□ 1.52
C9orf3-216ENST00000478603 CSTF1Q05048 431 aaKnown RBP24.56■■□□□ 1.52
C9orf3-216ENST00000478603 SMARCB1Q12824 385 aa24.56■■□□□ 1.52
C9orf3-216ENST00000478603 ARHGAP15Q53QZ3 475 aa24.56■■□□□ 1.52
C9orf3-216ENST00000478603 ZC3H14Q6PJT7 736 aaKnown RBP24.56■■□□□ 1.52
C9orf3-216ENST00000478603 STXBP4Q6ZWJ1 553 aa24.56■■□□□ 1.52
C9orf3-216ENST00000478603 CBWD2Q8IUF1 395 aa24.56■■□□□ 1.52
C9orf3-216ENST00000478603 ZNF687Q8N1G0 1237 aa24.56■■□□□ 1.52
C9orf3-216ENST00000478603 LRRC52Q8N7C0 313 aa24.56■■□□□ 1.52
C9orf3-216ENST00000478603 IQUBQ8NA54 791 aa24.56■■□□□ 1.52
C9orf3-216ENST00000478603 STKLD1Q8NE28 680 aa24.56■■□□□ 1.52
C9orf3-216ENST00000478603 FAM3CQ92520 227 aa24.56■■□□□ 1.52
C9orf3-216ENST00000478603 LRRC3BQ96PB8 259 aa24.56■■□□□ 1.52
C9orf3-216ENST00000478603 SEMA4AQ9H3S1 761 aa24.56■■□□□ 1.52
C9orf3-216ENST00000478603 PCDHB5Q9Y5E4 795 aa24.56■■□□□ 1.52
C9orf3-216ENST00000478603 EP300Q09472 2414 aaPredicted RBP24.56■■□□□ 1.52
C9orf3-216ENST00000478603 GVINP1Q7Z2Y8 2422 aa24.56■■□□□ 1.52
C9orf3-216ENST00000478603 PTPRJQ12913 1337 aa24.56■■□□□ 1.52
C9orf3-216ENST00000478603 OBSL1O75147 1896 aa24.55■■□□□ 1.52
C9orf3-216ENST00000478603 KIF26AQ9ULI4 1882 aaPredicted RBP24.55■■□□□ 1.52
C9orf3-216ENST00000478603 HUS1O60921 280 aa24.55■■□□□ 1.52
C9orf3-216ENST00000478603 CASP1P29466 404 aa24.55■■□□□ 1.52
C9orf3-216ENST00000478603 RPS9P46781 194 aaKnown RBP24.55■■□□□ 1.52
C9orf3-216ENST00000478603 GPR15P49685 360 aa24.55■■□□□ 1.52
C9orf3-216ENST00000478603 AMPD3Q01432 767 aa24.55■■□□□ 1.52
C9orf3-216ENST00000478603 TSPY1Q01534 308 aa24.55■■□□□ 1.52
C9orf3-216ENST00000478603 TAF12Q16514 161 aa24.55■■□□□ 1.52
C9orf3-216ENST00000478603 OSTM1Q86WC4 334 aa24.55■■□□□ 1.52
C9orf3-216ENST00000478603 SPRYD3Q8NCJ5 442 aa24.55■■□□□ 1.52
C9orf3-216ENST00000478603 OR5B17Q8NGF7 314 aa24.55■■□□□ 1.52
C9orf3-216ENST00000478603 PI4K2AQ9BTU6 479 aa24.55■■□□□ 1.52
C9orf3-216ENST00000478603 DDX43Q9NXZ2 648 aaKnown RBP24.55■■□□□ 1.52
C9orf3-216ENST00000478603 FBXO4Q9UKT5 387 aa24.55■■□□□ 1.52
C9orf3-216ENST00000478603 SNX9Q9Y5X1 595 aa24.55■■□□□ 1.52
C9orf3-216ENST00000478603 POLR2DO15514 142 aaKnown RBP24.54■■□□□ 1.52
C9orf3-216ENST00000478603 HCRTO43612 131 aa24.54■■□□□ 1.52
C9orf3-216ENST00000478603 PRAMEF12O95522 483 aa24.54■■□□□ 1.52
C9orf3-216ENST00000478603 CCNE1P24864 410 aa24.54■■□□□ 1.52
C9orf3-216ENST00000478603 RBP5P82980 135 aa24.54■■□□□ 1.52
C9orf3-216ENST00000478603 FCHO2Q0JRZ9 810 aa24.54■■□□□ 1.52
C9orf3-216ENST00000478603 MTAPQ13126 283 aa24.54■■□□□ 1.52
C9orf3-216ENST00000478603 PKP1Q13835 747 aa24.54■■□□□ 1.52
C9orf3-216ENST00000478603 CCDC142Q17RM4 750 aa24.54■■□□□ 1.52
C9orf3-216ENST00000478603 FAM26FQ5R3K3 315 aa24.54■■□□□ 1.52
C9orf3-216ENST00000478603 SDHAF4Q5VUM1 108 aa24.54■■□□□ 1.52
C9orf3-216ENST00000478603 TSSK4Q6SA08 328 aa24.54■■□□□ 1.52
C9orf3-216ENST00000478603 CSGALNACT1Q8TDX6 532 aa24.54■■□□□ 1.52
C9orf3-216ENST00000478603 ZFYVE19Q96K21 471 aa24.54■■□□□ 1.52
C9orf3-216ENST00000478603 SMG9Q9H0W8 520 aaKnown RBP24.54■■□□□ 1.52
C9orf3-216ENST00000478603 TASP1Q9H6P5 420 aa24.54■■□□□ 1.52
C9orf3-216ENST00000478603 INTS13Q9NVM9 706 aa24.54■■□□□ 1.52
C9orf3-216ENST00000478603 HSPBP1Q9NZL4 362 aa24.54■■□□□ 1.52
C9orf3-216ENST00000478603 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.53■■□□□ 1.52
C9orf3-216ENST00000478603 ZNF233A6NK53 670 aa24.53■■□□□ 1.52
C9orf3-216ENST00000478603 DPYSL4O14531 572 aa24.53■■□□□ 1.52
C9orf3-216ENST00000478603 KIAA0391O15091 583 aaKnown RBP24.53■■□□□ 1.52
C9orf3-216ENST00000478603 CHADO15335 359 aa24.53■■□□□ 1.52
C9orf3-216ENST00000478603 EIF3DO15371 548 aaKnown RBP eCLIP24.53■■□□□ 1.52
C9orf3-216ENST00000478603 PRPF40AO75400 957 aaKnown RBP24.53■■□□□ 1.52
C9orf3-216ENST00000478603 CDC25CP30307 473 aa24.53■■□□□ 1.52
C9orf3-216ENST00000478603 SOX9P48436 509 aa24.53■■□□□ 1.52
C9orf3-216ENST00000478603 ZNF528Q3MIS6 628 aa24.53■■□□□ 1.52
C9orf3-216ENST00000478603 CNNM4Q6P4Q7 775 aa24.53■■□□□ 1.52
C9orf3-216ENST00000478603 EPM2AIP1Q7L775 607 aaPredicted RBP24.53■■□□□ 1.52
C9orf3-216ENST00000478603 TTC8Q8TAM2 541 aa24.53■■□□□ 1.52
C9orf3-216ENST00000478603 ANKRD36BP1Q96IX9 119 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms