RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 SDHAP31040 664 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 CHKAP35790 457 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 MATR3P43243 847 aaKnown RBP eCLIP3.84□□□□□ -1.792e-6■■□□□ 11.8
FNDC3B-209ENST00000478016 MAPK9P45984 424 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 POLD2P49005 469 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 CENPAP49450 140 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 CCT8P50990 548 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 CLCN2P51788 898 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 KIF11P52732 1056 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 CLNS1AP54105 237 aaKnown RBP3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 TGFB2P61812 414 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 ICA1Q05084 483 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 PPFIA1Q13136 1202 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 NEDD9Q14511 834 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 GRM3Q14832 879 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 RTP5Q14D33 572 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 TMEM132BQ14DG7 1078 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 PPP1R7Q15435 360 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 ZNF174Q15697 407 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 KCNT1Q5JUK3 1230 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 PRR31Q5SQ13 230 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 SH2D4BQ5SQS7 431 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 RNF219Q5W0B1 726 aaPredicted RBP3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 OTUD7BQ6GQQ9 843 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 LIN54Q6MZP7 749 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 DSTYKQ6XUX3 929 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 CCDC91Q7Z6B0 441 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 TMEM110Q86TL2 294 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 SPATA24Q86W54 205 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 SP8Q8IXZ3 490 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 TEX11Q8IYF3 940 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 ADGRG2Q8IZP9 1017 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 IL17RDQ8NFM7 739 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 IPMKQ8NFU5 416 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 SLC30A5Q8TAD4 765 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 MGARPQ8TDB4 240 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 ASB15Q8WXK1 588 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 FATE1Q969F0 183 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 EPSTI1Q96J88 318 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 CEP295NLQ96MC4 621 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 MYD88Q99836 296 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 ZPBPQ9BS86 351 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 TTLL2Q9BWV7 592 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 NAA15Q9BXJ9 866 aaKnown RBP3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 PUS7LQ9H0K6 701 aaKnown RBP3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 PCIF1Q9H4Z3 704 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 ZWILCHQ9H900 591 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 VPS37BQ9H9H4 285 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.84□□□□□ -1.791e-9■□□□□ 10.1
FNDC3B-209ENST00000478016 SLC39A2Q9NP94 309 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 GPR108Q9NPR9 543 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 LUC7LQ9NQ29 371 aaKnown RBP3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 DDX4Q9NQI0 724 aaKnown RBP3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 RXFP3Q9NSD7 469 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 USP40Q9NVE5 1235 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 SLC5A4Q9NY91 659 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 BTBD7Q9P203 1132 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 STK39Q9UEW8 545 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 ZFP69BQ9UJL9 534 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 CCPG1Q9ULG6 757 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 RIMKLBQ9ULI2 386 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 CNPY2Q9Y2B0 182 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 CAB39Q9Y376 341 aaPredicted RBP3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 SOS1Q07889 1333 aaPredicted RBP3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 CGNL1Q0VF96 1302 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 AATKQ6ZMQ8 1374 aa3.84□□□□□ -1.79
FNDC3B-209ENST00000478016 PPRC1Q5VV67 1664 aaKnown RBP3.84□□□□□ -1.8
FNDC3B-209ENST00000478016 CCDC69A6NI79 296 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 LRRC72A6NJI9 287 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 CCDC169A6NNP5 214 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 CACNB4O00305 520 aaPredicted RBP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 ELL2O00472 640 aaPredicted RBP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 DDX3XO00571 662 aaKnown RBP eCLIP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 CAPN9O14815 690 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 GPR39O43194 453 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 BRINP1O60477 761 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 TRIM13O60858 407 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 THEGLP0DJG4 465 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 PCP11498 1178 aaKnown RBP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 BMP7P18075 431 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 TFEBP19484 476 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 PBLDP30039 288 aaPredicted RBP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 IL13P35225 146 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 RDXP35241 583 aaKnown RBP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 KCNJ4P48050 445 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 GLRBP48167 497 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 KCNC1P48547 511 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 FNTBP49356 437 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 ETV1P50549 477 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 SCNN1BP51168 640 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 ALDH3A2P51648 485 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 RPS6KA3P51812 740 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 ATXN1P54253 815 aaKnown RBP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 SLURP1P55000 103 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 MLLT6P55198 1093 aaPredicted RBP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 DSG1Q02413 1049 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 GBE1Q04446 702 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 GRSF1Q12849 480 aaKnown RBP eCLIP3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 GRM1Q13255 1194 aa3.83□□□□□ -1.8
FNDC3B-209ENST00000478016 ADAM15Q13444 863 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms