RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 USP44Q9H0E7 712 aa6.28□□□□□ -1.4
SSR3-206ENST00000476217 CSRNP2Q9H175 543 aa6.28□□□□□ -1.4
SSR3-206ENST00000476217 CWC25Q9NXE8 425 aaPredicted RBP6.28□□□□□ -1.4
SSR3-206ENST00000476217 FAM30AQ9NZY2 134 aa6.28□□□□□ -1.4
SSR3-206ENST00000476217 TNKSO95271 1327 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 E2F8A0AVK6 867 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 FZD9O00144 591 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 SGTAO43765 313 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 NBPF7P0C2Y1 421 aaPredicted RBP6.27□□□□□ -1.41
SSR3-206ENST00000476217 GUCY1A2P33402 732 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 EIF5P55010 431 aaKnown RBP6.27□□□□□ -1.41
SSR3-206ENST00000476217 CLRN1P58418 232 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 KRTAP10-2P60368 255 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 FOXE3Q13461 319 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 PUM1Q14671 1186 aaKnown RBP eCLIP6.27□□□□□ -1.418e-9■□□□□ 10.1
SSR3-206ENST00000476217 FAM214AQ32MH5 1076 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 TMEM240Q5SV17 173 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 EFCAB12Q6NXP0 572 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 Q6ZRM9 215 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 UBE3BQ7Z3V4 1068 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 ZBTB46Q86UZ6 589 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 DRC7Q8IY82 874 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 CCDC191Q8NCU4 936 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 IL17DQ8TAD2 202 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 EXTL1Q92935 676 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 GCC1Q96CN9 775 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 PLEKHG4BQ96PX9 1271 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 LSM14BQ9BX40 385 aaKnown RBP6.27□□□□□ -1.41
SSR3-206ENST00000476217 DMRT3Q9NQL9 472 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 MYH14Q7Z406 1995 aaKnown RBP6.27□□□□□ -1.41
SSR3-206ENST00000476217 IBTKQ9P2D0 1353 aaPredicted RBP6.27□□□□□ -1.41
SSR3-206ENST00000476217 NUP98P52948 1817 aa6.27□□□□□ -1.41
SSR3-206ENST00000476217 RGPD3A6NKT7 1758 aaPredicted RBP6.26□□□□□ -1.41
SSR3-206ENST00000476217 RGPD4Q7Z3J3 1758 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 C4AP0C0L4 1744 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 ERVV-1B6SEH8 477 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 MATN3O15232 486 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 ADCY6O43306 1168 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 PDGFRBP09619 1106 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 ALOX15P16050 662 aaPredicted RBP6.26□□□□□ -1.41
SSR3-206ENST00000476217 TNFRSF1AP19438 455 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 GPTP24298 496 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 HMGB2P26583 209 aaKnown RBP6.26□□□□□ -1.41
SSR3-206ENST00000476217 SCNN1GP51170 649 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 NEK2P51955 445 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 HLFQ16534 295 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 RABL3Q5HYI8 236 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 OTUD7BQ6GQQ9 843 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 USP51Q70EK9 711 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 SPRED1Q7Z699 444 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 MIER2Q8N344 545 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 NRG4Q8WWG1 115 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 TFAP2CQ92754 450 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 ZNF503Q96F45 646 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 SUCLG2Q96I99 432 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 SLC2A13Q96QE2 648 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 SMAD5Q99717 465 aaKnown RBP6.26□□□□□ -1.41
SSR3-206ENST00000476217 NDC1Q9BTX1 674 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 VPS11Q9H270 941 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 DDX56Q9NY93 547 aaKnown RBP6.26□□□□□ -1.41
SSR3-206ENST00000476217 INTUQ9ULD6 942 aa6.26□□□□□ -1.41
SSR3-206ENST00000476217 UTYO14607 1347 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 PNMA6EA0A0J9YXQ4 647 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 PCDHGA12O60330 932 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 GPR32O75388 356 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 RPS6KA4O75676 772 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 CAMTA2O94983 1202 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 SPATA31D3P0C874 917 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 HK1P19367 917 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 C5AR1P21730 350 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 PTGS2P35354 604 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 ATP8B2P98198 1209 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 OS9Q13438 667 aaPredicted RBP6.25□□□□□ -1.41
SSR3-206ENST00000476217 PCBP2Q15366 365 aaKnown RBP eCLIP6.25□□□□□ -1.41
SSR3-206ENST00000476217 TXNRD1Q16881 649 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 ANKRD45Q5TZF3 282 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 C1QL3Q5VWW1 255 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 SPATA31D4Q6ZUB0 917 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 PPP1R42Q7Z4L9 355 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 SKAP1Q86WV1 359 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 SMC5Q8IY18 1101 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 PPM1NQ8N819 430 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 ISCA1Q9BUE6 129 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 REXO4Q9GZR2 422 aaKnown RBP6.25□□□□□ -1.41
SSR3-206ENST00000476217 BICC1Q9H694 974 aaKnown RBP6.25□□□□□ -1.41
SSR3-206ENST00000476217 SPON1Q9HCB6 807 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 TCF7L1Q9HCS4 588 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 PCDHGA9Q9Y5G4 932 aaKnown RBP6.25□□□□□ -1.41
SSR3-206ENST00000476217 PCDHGA8Q9Y5G5 932 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 PCDHGA7Q9Y5G6 932 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 PCDHGA6Q9Y5G7 932 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 PCDHGA3Q9Y5H0 932 aa6.25□□□□□ -1.41
SSR3-206ENST00000476217 UBR3Q6ZT12 1888 aa6.24□□□□□ -1.41
SSR3-206ENST00000476217 DTNBO60941 627 aa6.24□□□□□ -1.41
SSR3-206ENST00000476217 ALAS1P13196 640 aa6.24□□□□□ -1.41
SSR3-206ENST00000476217 RFC4P35249 363 aa6.24□□□□□ -1.41
SSR3-206ENST00000476217 CDC42EP1Q00587 391 aa6.24□□□□□ -1.41
SSR3-206ENST00000476217 NUCB1Q02818 461 aa6.24□□□□□ -1.41
SSR3-206ENST00000476217 TUBA3CQ13748 450 aa6.24□□□□□ -1.41
SSR3-206ENST00000476217 TOB2Q14106 344 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms