RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 NFICP08651 508 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 EIF4BP23588 611 aaKnown RBP16.9■□□□□ 0.3
VARS2-207ENST00000476162 OGDHQ02218 1023 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 LAMC2Q13753 1193 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 ZKSCAN8Q15776 578 aaPredicted RBP16.9■□□□□ 0.3
VARS2-207ENST00000476162 CCNG2Q16589 344 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 LDLRAD1Q5T700 205 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 CYP4A22Q5TCH4 519 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 TLDC1Q6P9B6 456 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 DCUN1D2Q6PH85 259 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 GPRC5AQ8NFJ5 357 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 L3MBTL3Q96JM7 780 aaPredicted RBP16.9■□□□□ 0.3
VARS2-207ENST00000476162 FDXACB1Q9BRP7 624 aaPredicted RBP16.9■□□□□ 0.3
VARS2-207ENST00000476162 ZNF518BQ9C0D4 1074 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 PPANQ9NQ55 473 aaKnown RBP16.9■□□□□ 0.3
VARS2-207ENST00000476162 AAASQ9NRG9 546 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 HOMER3Q9NSC5 361 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 SIX4Q9UIU6 781 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 PCDHGC3Q9UN70 934 aa16.9■□□□□ 0.3
VARS2-207ENST00000476162 CDH5P33151 784 aaPredicted RBP16.89■□□□□ 0.29
VARS2-207ENST00000476162 VPS41P49754 854 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 LACTBP83111 547 aaPredicted RBP16.89■□□□□ 0.29
VARS2-207ENST00000476162 ADCY2Q08462 1091 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 NFX1Q12986 1120 aaKnown RBP16.89■□□□□ 0.29
VARS2-207ENST00000476162 BYSLQ13895 437 aaKnown RBP16.89■□□□□ 0.29
VARS2-207ENST00000476162 WDR72Q3MJ13 1102 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 ZNF484Q5JVG2 852 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 ZFYVE27Q5T4F4 411 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 RHBDF2Q6PJF5 856 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 MICALCLQ6ZW33 695 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 ERICH1Q86X53 443 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 C1orf127Q8N9H9 656 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 UPF1Q92900 1129 aaKnown RBP eCLIP16.89■□□□□ 0.29
VARS2-207ENST00000476162 SLC10A4Q96EP9 437 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 SNF8Q96H20 258 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 NFKBIZQ9BYH8 718 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 PRMT7Q9NVM4 692 aaPredicted RBP16.89■□□□□ 0.29
VARS2-207ENST00000476162 IVNS1ABPQ9Y6Y0 642 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 A0A1B0GUA9 196 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 LACTBL1A8MY62 500 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 IL18RAPO95256 599 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 STAG3L1P0CL83 205 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 KRT10P13645 584 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 CD19P15391 556 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 ADORA2AP29274 412 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 CHKAP35790 457 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 ADCY8P40145 1251 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 PHKA2P46019 1235 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 CCNHP51946 323 aaPredicted RBP16.89■□□□□ 0.29
VARS2-207ENST00000476162 CDH8P55286 799 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 ZNF792Q3KQV3 632 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 KAZNQ674X7 775 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 DENND1BQ6P3S1 775 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 MAMDC4Q6UXC1 1216 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 MAGEC3Q8TD91 643 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 PGM2Q96G03 612 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 SCLT1Q96NL6 688 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 SYT17Q9BSW7 474 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 PNMA3Q9UL41 463 aa16.89■□□□□ 0.29
VARS2-207ENST00000476162 E7EVH7 732 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 ITGA8P53708 1063 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 AMHR2Q16671 573 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 PPP1R15BQ5SWA1 713 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 NLRP14Q86W24 1093 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 ZNF483Q8TF39 744 aaPredicted RBP16.88■□□□□ 0.29
VARS2-207ENST00000476162 AFG1LQ8WV93 481 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 CPB2Q96IY4 423 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 CCT8L2Q96SF2 557 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 CDC42EP4Q9H3Q1 356 aaKnown RBP16.88■□□□□ 0.29
VARS2-207ENST00000476162 SLC40A1Q9NP59 571 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 AKT3Q9Y243 479 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 NEU2Q9Y3R4 380 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 GH1P01241 217 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 VTNP04004 478 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 ZNF286BP0CG31 522 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 ATF2P15336 505 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 SLCO1A2P46721 670 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 CLNS1AP54105 237 aaKnown RBP16.88■□□□□ 0.29
VARS2-207ENST00000476162 YWHAEP62258 255 aaKnown RBP16.88■□□□□ 0.29
VARS2-207ENST00000476162 ORC1Q13415 861 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 ZNF667Q5HYK9 610 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 TXNRD3NBQ6F5E7 133 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 JADE1Q6IE81 842 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 CCDC13Q8IYE1 715 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 RCOR2Q8IZ40 523 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 MYCBPAPQ8TBZ2 947 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 EPS8L3Q8TE67 593 aaKnown RBP16.88■□□□□ 0.29
VARS2-207ENST00000476162 DDX23Q9BUQ8 820 aaKnown RBP16.88■□□□□ 0.29
VARS2-207ENST00000476162 SDCBP2Q9H190 292 aa16.88■□□□□ 0.29
VARS2-207ENST00000476162 RGS16O15492 202 aaPredicted RBP16.87■□□□□ 0.29
VARS2-207ENST00000476162 KRT1P04264 644 aa16.87■□□□□ 0.29
VARS2-207ENST00000476162 ITGB3P05106 788 aa16.87■□□□□ 0.29
VARS2-207ENST00000476162 CETN2P41208 172 aa16.87■□□□□ 0.29
VARS2-207ENST00000476162 ADCYAP1R1P41586 468 aa16.87■□□□□ 0.29
VARS2-207ENST00000476162 IFI35P80217 286 aaPredicted RBP16.87■□□□□ 0.29
VARS2-207ENST00000476162 POU5F1BQ06416 359 aa16.87■□□□□ 0.29
VARS2-207ENST00000476162 FAM187BQ17R55 369 aa16.87■□□□□ 0.29
VARS2-207ENST00000476162 C6orf118Q5T5N4 469 aa16.87■□□□□ 0.29
VARS2-207ENST00000476162 MFSD7Q6UXD7 560 aa16.87■□□□□ 0.29
VARS2-207ENST00000476162 ZNF365Q70YC5 407 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms