RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 IL18RAPO95256 599 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 FAM107AO95990 144 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 GH1P01241 217 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 CHN1P15882 459 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 PSMC1P62191 440 aaKnown RBP9.44□□□□□ -0.9
CCDC66-216ENST00000476142 PLCB3Q01970 1234 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 SF3A3Q12874 501 aaKnown RBP eCLIP9.44□□□□□ -0.9
CCDC66-216ENST00000476142 LAMC2Q13753 1193 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 KYNUQ16719 465 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 RNF187Q5TA31 235 aaPredicted RBP9.44□□□□□ -0.9
CCDC66-216ENST00000476142 USP50Q70EL3 339 aaPredicted RBP9.44□□□□□ -0.9
CCDC66-216ENST00000476142 TRMT10CQ7L0Y3 403 aaKnown RBP9.44□□□□□ -0.9
CCDC66-216ENST00000476142 PGM2Q96G03 612 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 CNOT10Q9H9A5 744 aaKnown RBP9.44□□□□□ -0.9
CCDC66-216ENST00000476142 HMGXB4Q9UGU5 601 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 SIX4Q9UIU6 781 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 PNMA3Q9UL41 463 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 DNPEPQ9ULA0 475 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 CLEC11AQ9Y240 323 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 PAPPA2Q9BXP8 1791 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 TRAPPC3O43617 180 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 TJP3O95049 919 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 EIF4BP23588 611 aaKnown RBP9.44□□□□□ -0.9
CCDC66-216ENST00000476142 IVDP26440 423 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 POLR2BP30876 1174 aaKnown RBP9.44□□□□□ -0.9
CCDC66-216ENST00000476142 P3H1Q32P28 736 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 PTPN20Q4JDL3 420 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 ZNF484Q5JVG2 852 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 SPOCD1Q6ZMY3 1216 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 CCDC89Q8N998 374 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 FAM129AQ9BZQ8 928 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 ZNF518BQ9C0D4 1074 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 SDCBP2Q9H190 292 aa9.44□□□□□ -0.9
CCDC66-216ENST00000476142 PDHXO00330 501 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 PIK3R2O00459 728 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 MED7O43513 233 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 AGTP01019 485 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 ZSCAN5DPP0CG00 497 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 KRT3P12035 628 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 ETS1P14921 441 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 RFC1P35251 1148 aaPredicted RBP9.43□□□□□ -0.9
CCDC66-216ENST00000476142 PSMC4P43686 418 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 LIG3P49916 1009 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 CCNA1P78396 465 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 PIGHQ14442 188 aaPredicted RBP9.43□□□□□ -0.9
CCDC66-216ENST00000476142 KCNT1Q5JUK3 1230 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 EMC1Q8N766 993 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 C3orf20Q8ND61 904 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 PPP1R13LQ8WUF5 828 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 TWNKQ96RR1 684 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 STMN4Q9H169 189 aaPredicted RBP9.43□□□□□ -0.9
CCDC66-216ENST00000476142 PDZD7Q9H5P4 517 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 CYTH4Q9UIA0 394 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 PCDHGC3Q9UN70 934 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 LRRC37A2A6NM11 1700 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.43□□□□□ -0.9
CCDC66-216ENST00000476142 M0QYV0 167 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 LIASO43766 372 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 IFNB1P01574 187 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 ARF4P18085 180 aaPredicted RBP9.43□□□□□ -0.9
CCDC66-216ENST00000476142 IFNAR2P48551 515 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 RAD23BP54727 409 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 IFT88Q13099 833 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 AUHQ13825 339 aaKnown RBP9.43□□□□□ -0.9
CCDC66-216ENST00000476142 QPCTQ16769 361 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 HP1BP3Q5SSJ5 553 aaPredicted RBP9.43□□□□□ -0.9
CCDC66-216ENST00000476142 CYP4F22Q6NT55 531 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 TAPT1Q6NXT6 567 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 RHBDF2Q6PJF5 856 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 MICALCLQ6ZW33 695 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 CPLX4Q7Z7G2 160 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 CROCCP2Q86T23 111 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 GLIS1Q8NBF1 620 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 JOSD2Q8TAC2 188 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 MGARPQ8TDB4 240 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 IPO4Q8TEX9 1081 aaKnown RBP9.43□□□□□ -0.9
CCDC66-216ENST00000476142 C9orf72Q96LT7 481 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 HEXIM2Q96MH2 286 aaKnown RBP9.43□□□□□ -0.9
CCDC66-216ENST00000476142 XPO6Q96QU8 1125 aaKnown RBP9.43□□□□□ -0.9
CCDC66-216ENST00000476142 METTL5Q9NRN9 209 aaKnown RBP9.43□□□□□ -0.9
CCDC66-216ENST00000476142 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.43□□□□□ -0.9
CCDC66-216ENST00000476142 CTNNAL1Q9UBT7 734 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 STRIP2Q9ULQ0 834 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 AGAP1Q9UPQ3 857 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 MCM3APO60318 1980 aa9.43□□□□□ -0.9
CCDC66-216ENST00000476142 DICER1Q9UPY3 1922 aaKnown RBP9.42□□□□□ -0.9
CCDC66-216ENST00000476142 TCRBV5S1A1TA0A578 114 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 FOXO6A8MYZ6 492 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 MEFVO15553 781 aaPredicted RBP9.42□□□□□ -0.9
CCDC66-216ENST00000476142 MCF2P10911 925 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 ARSEP51690 589 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 CAV1Q03135 178 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 TNFAIP2Q03169 654 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 TAP1Q03518 808 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 TMEM62Q0P6H9 643 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 DPP9Q86TI2 863 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 TAX1BP1Q86VP1 789 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 MICALL1Q8N3F8 863 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 OTUD6BQ8N6M0 293 aa9.42□□□□□ -0.9
CCDC66-216ENST00000476142 SHCBP1Q8NEM2 672 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms