RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 ADGRG5Q8IZF4 528 aa6.94□□□□□ -1.3
TM9SF3-204ENST00000475401 MPP5Q8N3R9 675 aa6.94□□□□□ -1.3
TM9SF3-204ENST00000475401 Q8NA96 180 aa6.94□□□□□ -1.3
TM9SF3-204ENST00000475401 ANKS1AQ92625 1134 aa6.94□□□□□ -1.3
TM9SF3-204ENST00000475401 CAVIN3Q969G5 261 aa6.94□□□□□ -1.3
TM9SF3-204ENST00000475401 APIPQ96GX9 242 aa6.94□□□□□ -1.3
TM9SF3-204ENST00000475401 PRRX2Q99811 253 aa6.94□□□□□ -1.3
TM9SF3-204ENST00000475401 NUP62CLQ9H1M0 184 aa6.94□□□□□ -1.3
TM9SF3-204ENST00000475401 ATP6V0A4Q9HBG4 840 aa6.94□□□□□ -1.3
TM9SF3-204ENST00000475401 ETAA1Q9NY74 926 aa6.94□□□□□ -1.3
TM9SF3-204ENST00000475401 A0A0B4J269 797 aa6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 DNAJB5O75953 348 aa6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 CYP2C9P11712 490 aa6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 ZKSCAN1P17029 563 aaPredicted RBP6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 RPL17P18621 184 aaKnown RBP6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 CHRM3P20309 590 aa6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 ZEB1P37275 1124 aaPredicted RBP6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 GNALP38405 381 aa6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 GCLCP48506 637 aaPredicted RBP6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 NDUFV1P49821 464 aa6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 SUMO3P55854 103 aaPredicted RBP6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 UCP3P55916 312 aa6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 TUBB3Q13509 450 aa6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 IGFL4Q6B9Z1 124 aa6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 KSR2Q6VAB6 950 aa6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 GPR149Q86SP6 731 aa6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 DNAJC5GQ8N7S2 189 aa6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 FUBP1Q96AE4 644 aaKnown RBP6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 SLC46A1Q96NT5 459 aa6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 SPATA5L1Q9BVQ7 753 aa6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 TTYH3Q9C0H2 523 aa6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 BHMT2Q9H2M3 363 aa6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 SACM1LQ9NTJ5 587 aa6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 XPR1Q9UBH6 696 aa6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 HESX1Q9UBX0 185 aa6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 SHOC2Q9UQ13 582 aa6.93□□□□□ -1.3
TM9SF3-204ENST00000475401 MYO1FO00160 1098 aa6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 CYR61O00622 381 aa6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 MYL1P05976 194 aa6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 EGR2P11161 476 aaPredicted RBP6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 MYF5P13349 255 aa6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 VIPR2P41587 438 aa6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 SLC11A2P49281 568 aa6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 ARFIP2P53365 341 aa6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 PURAQ00577 322 aaKnown RBP6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 MC2RQ01718 297 aa6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 CNGA2Q16280 664 aa6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 COBLL1Q53SF7 1204 aa6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 ULK2Q8IYT8 1036 aa6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 FAM9AQ8IZU1 332 aaPredicted RBP6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 Q8N1X5 172 aa6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 SLC15A4Q8N697 577 aa6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 B3GALNT2Q8NCR0 500 aa6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 ASB10Q8WXI3 467 aa6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 LARP4BQ92615 738 aaKnown RBP6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 SARGQ9BW04 601 aa6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 ZNF518BQ9C0D4 1074 aa6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 DDX21Q9NR30 783 aaKnown RBP eCLIP6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 AFF4Q9UHB7 1163 aaKnown RBP6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 PCDHGB6Q9Y5F9 930 aa6.92□□□□□ -1.3
TM9SF3-204ENST00000475401 TBX3O15119 743 aa6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 PQBP1O60828 265 aaKnown RBP6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 ZFPL1O95159 310 aa6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 NBPF7P0C2Y1 421 aaPredicted RBP6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 PXNP49023 591 aaPredicted RBP6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 TBX4P57082 545 aa6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 LOXL3P58215 753 aa6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 SEMA5AQ13591 1074 aa6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 FHL2Q14192 279 aa6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 SAFBQ15424 915 aaKnown RBP eCLIP6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 SFRP4Q6FHJ7 346 aaPredicted RBP6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 CCSAPQ6IQ19 270 aaPredicted RBP6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 NOL8Q76FK4 1167 aaKnown RBP6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 COL23A1Q86Y22 540 aaPredicted RBP6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 LRIG1Q96JA1 1093 aa6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 COQ10AQ96MF6 247 aa6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 NELL2Q99435 816 aa6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 VSX1Q9NZR4 365 aaPredicted RBP6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 CPNE7Q9UBL6 633 aa6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 FAM50BQ9Y247 325 aa6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 SNX13Q9Y5W8 968 aa6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 USP19O94966 1318 aa6.91□□□□□ -1.3
TM9SF3-204ENST00000475401 FOXN3O00409 490 aaPredicted RBP6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 PEX1O43933 1283 aa6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 PLIN1O60240 522 aa6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 SRGNP10124 158 aa6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 TRIM27P14373 513 aa6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 CD6P30203 668 aa6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 WNT3P56703 355 aa6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 ITIH3Q06033 890 aa6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 CTBP1Q13363 440 aa6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 MGAT5BQ3V5L5 792 aa6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 LAIR1Q6GTX8 287 aa6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 TMEM108Q6UXF1 575 aa6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 C11orf96Q7Z7L8 435 aa6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 LNX2Q8N448 690 aa6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 SSH3Q8TE77 659 aa6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 Q96MF0 132 aa6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 OSBPL9Q96SU4 736 aa6.9□□□□□ -1.3
TM9SF3-204ENST00000475401 AIFM2Q9BRQ8 373 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms