RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 TMEM191BP0C7N4 346 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 VDRP11473 427 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 NTHL1P78549 312 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 BMT2Q1RMZ1 405 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 RNF19BQ6ZMZ0 732 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 THEM5Q8N1Q8 247 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 LRRC52Q8N7C0 313 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 LEMD2Q8NC56 503 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 GOLGA5Q8TBA6 731 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 SCFD1Q8WVM8 642 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 FGF13Q92913 245 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 PAGE5Q96GU1 130 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 PRRX2Q99811 253 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 AGPAT3Q9NRZ7 376 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 HSFX1Q9UBD0 423 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 SUFUQ9UMX1 484 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 MRPS23Q9Y3D9 190 aaKnown RBP12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 R3HCC1Q9Y3T6 440 aaKnown RBP12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 DENND4AQ7Z401 1863 aa12.38□□□□□ -0.43
HLA-DOB-208ENST00000475235 FAM237AA0A1B0GTK4 181 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 A0A1W2PQ27 194 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 A0A1W2PQ64 194 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 A0A1W2PQD8 194 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 PES1O00541 588 aaKnown RBP12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 ZNF197O14709 1029 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 TGFB1I1O43294 461 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 MICAL2O94851 1124 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 ITGB3P05106 788 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 RHOP08100 348 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 CASP1P29466 404 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 POLR2BP30876 1174 aaKnown RBP12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 HOXD13P35453 343 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 FLT3P36888 993 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 SYKP43405 635 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 NUCB2P80303 420 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 TWF1Q12792 350 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 SMARCB1Q12824 385 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 PSMD2Q13200 908 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 HTR4Q13639 388 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 CYP4A22Q5TCH4 519 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 SLC44A3Q8N4M1 653 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 GOLGA6L1Q8N7Z2 621 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 C1orf127Q8N9H9 656 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 ZSWIM2Q8NEG5 633 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 CCDC34Q96HJ3 373 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 ANKRD36BP1Q96IX9 119 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 ZNF512Q96ME7 567 aaPredicted RBP12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 PDE11AQ9HCR9 933 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 SLC39A2Q9NP94 309 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 EXOC1Q9NV70 894 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 HCFC1R1Q9NWW0 138 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 GDE1Q9NZC3 331 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 AGAP1Q9UPQ3 857 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 NUMBLQ9Y6R0 609 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 MYH15Q9Y2K3 1946 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 GOLGA6L6A8MZA4 724 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 GOLGA6L22H0YM25 854 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 PRPF40AO75400 957 aaKnown RBP12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 TNNC2P02585 160 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 OR4Q2P0C623 313 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 SRFP11831 508 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 WNT7BP56706 349 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 RBP5P82980 135 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 SNRNP35Q16560 246 aaKnown RBP12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 ZSCAN26Q16670 478 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 KNOP1Q1ED39 458 aaKnown RBP12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 PDZD4Q76G19 769 aaPredicted RBP12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 ANKRD13BQ86YJ7 626 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 CBWD2Q8IUF1 395 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 WDR49Q8IV35 697 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 NPAS3Q8IXF0 933 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 NELFCDQ8IXH7 590 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 C12orf56Q8IXR9 622 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 CSGALNACT2Q8N6G5 542 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 XXYLT1Q8NBI6 393 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 ITFG1Q8TB96 612 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 C2orf15Q8WU43 125 aaKnown RBP12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 RSAD2Q8WXG1 361 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 CCDC47Q96A33 483 aaKnown RBP12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 FAM122AQ96E09 287 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 PGLYRP2Q96PD5 576 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 CORO1BQ9BR76 489 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 MFSD1Q9H3U5 465 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 SMOC2Q9H3U7 446 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 IGSF5Q9NSI5 407 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 INTS13Q9NVM9 706 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 WNT16Q9UBV4 365 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 FBXL21Q9UKT6 434 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 TPX2Q9ULW0 747 aaKnown RBP12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 YIPF1Q9Y548 306 aa12.37□□□□□ -0.43
HLA-DOB-208ENST00000475235 CITO14578 2027 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 VWA8A3KMH1 1905 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 MTMR11A4FU01 709 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 PPFIA2O75334 1257 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 STK10O94804 968 aaKnown RBP12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 KRT19P08727 400 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 PLA2G5P39877 138 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 ALDH1A3P47895 512 aa12.36□□□□□ -0.43
HLA-DOB-208ENST00000475235 EPHB3P54753 998 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms