RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 TMLHEQ9NVH6 421 aa17.39■□□□□ 0.37
SRM-204ENST00000475189 NXF1Q9UBU9 619 aaKnown RBP17.39■□□□□ 0.37
SRM-204ENST00000475189 POLIQ9UNA4 740 aa17.39■□□□□ 0.37
SRM-204ENST00000475189 CLUHO75153 1309 aa17.39■□□□□ 0.37
SRM-204ENST00000475189 TNFRSF10AO00220 468 aa17.38■□□□□ 0.37
SRM-204ENST00000475189 TACC1O75410 805 aa17.38■□□□□ 0.37
SRM-204ENST00000475189 LRG1P02750 347 aa17.38■□□□□ 0.37
SRM-204ENST00000475189 LMO2P25791 158 aa17.38■□□□□ 0.37
SRM-204ENST00000475189 CDR1P51861 262 aa17.38■□□□□ 0.37
SRM-204ENST00000475189 NTHL1P78549 312 aa17.38■□□□□ 0.37
SRM-204ENST00000475189 SMARCB1Q12824 385 aa17.38■□□□□ 0.37
SRM-204ENST00000475189 SGSM1Q2NKQ1 1148 aa17.38■□□□□ 0.37
SRM-204ENST00000475189 ZNF667Q5HYK9 610 aa17.38■□□□□ 0.37
SRM-204ENST00000475189 KRT39Q6A163 491 aa17.38■□□□□ 0.37
SRM-204ENST00000475189 FRMD5Q7Z6J6 570 aa17.38■□□□□ 0.37
SRM-204ENST00000475189 PIAS4Q8N2W9 510 aaPredicted RBP17.38■□□□□ 0.37
SRM-204ENST00000475189 TTC9BQ8N6N2 239 aa17.38■□□□□ 0.37
SRM-204ENST00000475189 TAS1R2Q8TE23 839 aa17.38■□□□□ 0.37
SRM-204ENST00000475189 MED15Q96RN5 788 aa17.38■□□□□ 0.37
SRM-204ENST00000475189 PKMYT1Q99640 499 aa17.38■□□□□ 0.37
SRM-204ENST00000475189 MRPL45Q9BRJ2 306 aaKnown RBP17.38■□□□□ 0.37
SRM-204ENST00000475189 HCFC1R1Q9NWW0 138 aa17.38■□□□□ 0.37
SRM-204ENST00000475189 DNMT3BQ9UBC3 853 aaKnown RBP17.38■□□□□ 0.37
SRM-204ENST00000475189 ARMCX3Q9UH62 379 aaPredicted RBP17.38■□□□□ 0.37
SRM-204ENST00000475189 USTQ9Y2C2 406 aa17.38■□□□□ 0.37
SRM-204ENST00000475189 SLC27A5Q9Y2P5 690 aa17.38■□□□□ 0.37
SRM-204ENST00000475189 NR2E1Q9Y466 385 aa17.38■□□□□ 0.37
SRM-204ENST00000475189 PTPRDP23468 1912 aa17.37■□□□□ 0.37
SRM-204ENST00000475189 C2CD4DB7Z1M9 353 aa17.37■□□□□ 0.37
SRM-204ENST00000475189 STX10O60499 249 aa17.37■□□□□ 0.37
SRM-204ENST00000475189 ASS1P00966 412 aaKnown RBP17.37■□□□□ 0.37
SRM-204ENST00000475189 PCSK1P29120 753 aa17.37■□□□□ 0.37
SRM-204ENST00000475189 PIK3CAP42336 1068 aa17.37■□□□□ 0.37
SRM-204ENST00000475189 TSPY1Q01534 308 aa17.37■□□□□ 0.37
SRM-204ENST00000475189 TWF1Q12792 350 aa17.37■□□□□ 0.37
SRM-204ENST00000475189 INTS6LQ5JSJ4 861 aaKnown RBP17.37■□□□□ 0.37
SRM-204ENST00000475189 TCERG1LQ5VWI1 586 aa17.37■□□□□ 0.37
SRM-204ENST00000475189 MLKLQ8NB16 471 aa17.37■□□□□ 0.37
SRM-204ENST00000475189 C2orf15Q8WU43 125 aaKnown RBP17.37■□□□□ 0.37
SRM-204ENST00000475189 TAF4BQ92750 862 aa17.37■□□□□ 0.37
SRM-204ENST00000475189 SRRTQ9BXP5 876 aaKnown RBP17.37■□□□□ 0.37
SRM-204ENST00000475189 METTL14Q9HCE5 456 aaKnown RBP17.37■□□□□ 0.37
SRM-204ENST00000475189 HSFX1Q9UBD0 423 aa17.37■□□□□ 0.37
SRM-204ENST00000475189 RWDD2AQ9UIY3 292 aa17.37■□□□□ 0.37
SRM-204ENST00000475189 YIPF1Q9Y548 306 aa17.37■□□□□ 0.37
SRM-204ENST00000475189 NME7Q9Y5B8 376 aa17.37■□□□□ 0.37
SRM-204ENST00000475189 N4BP1O75113 896 aaKnown RBP17.36■□□□□ 0.37
SRM-204ENST00000475189 LRRN2O75325 713 aa17.36■□□□□ 0.37
SRM-204ENST00000475189 MBD3O95983 291 aa17.36■□□□□ 0.37
SRM-204ENST00000475189 PDGFRBP09619 1106 aa17.36■□□□□ 0.37
SRM-204ENST00000475189 PTPN2P17706 415 aa17.36■□□□□ 0.37
SRM-204ENST00000475189 GNL1P36915 607 aaPredicted RBP17.36■□□□□ 0.37
SRM-204ENST00000475189 MXI1P50539 228 aa17.36■□□□□ 0.37
SRM-204ENST00000475189 NLRP12P59046 1061 aa17.36■□□□□ 0.37
SRM-204ENST00000475189 CCDC40Q4G0X9 1142 aa17.36■□□□□ 0.37
SRM-204ENST00000475189 DCAF17Q5H9S7 520 aaPredicted RBP17.36■□□□□ 0.37
SRM-204ENST00000475189 SPOPLQ6IQ16 392 aa17.36■□□□□ 0.37
SRM-204ENST00000475189 RBM43Q6ZSC3 357 aaKnown RBP17.36■□□□□ 0.37
SRM-204ENST00000475189 SPPL2BQ8TCT7 592 aa17.36■□□□□ 0.37
SRM-204ENST00000475189 KHSRPQ92945 711 aaKnown RBP eCLIP17.36■□□□□ 0.37
SRM-204ENST00000475189 SLC35C1Q96A29 364 aa17.36■□□□□ 0.37
SRM-204ENST00000475189 SYT15Q9BQS2 421 aa17.36■□□□□ 0.37
SRM-204ENST00000475189 PI4K2AQ9BTU6 479 aa17.36■□□□□ 0.37
SRM-204ENST00000475189 SNX25Q9H3E2 840 aa17.36■□□□□ 0.37
SRM-204ENST00000475189 SMYD3Q9H7B4 428 aa17.36■□□□□ 0.37
SRM-204ENST00000475189 CEP72Q9P209 647 aa17.36■□□□□ 0.37
SRM-204ENST00000475189 GTF3C4Q9UKN8 822 aa17.36■□□□□ 0.37
SRM-204ENST00000475189 CDH9Q9ULB4 789 aa17.36■□□□□ 0.37
SRM-204ENST00000475189 PCDHB5Q9Y5E4 795 aa17.36■□□□□ 0.37
SRM-204ENST00000475189 MYBPHLA2RUH7 354 aa17.35■□□□□ 0.37
SRM-204ENST00000475189 ATP2C2O75185 946 aa17.35■□□□□ 0.37
SRM-204ENST00000475189 SOAT2O75908 522 aa17.35■□□□□ 0.37
SRM-204ENST00000475189 CLSTN1O94985 981 aa17.35■□□□□ 0.37
SRM-204ENST00000475189 RAP1GAPP47736 663 aa17.35■□□□□ 0.37
SRM-204ENST00000475189 CDH8P55286 799 aa17.35■□□□□ 0.37
SRM-204ENST00000475189 NFE2Q16621 373 aaPredicted RBP17.35■□□□□ 0.37
SRM-204ENST00000475189 CCDC142Q17RM4 750 aa17.35■□□□□ 0.37
SRM-204ENST00000475189 DPCR1Q3MIW9 517 aa17.35■□□□□ 0.37
SRM-204ENST00000475189 CBWD6Q4V339 395 aa17.35■□□□□ 0.37
SRM-204ENST00000475189 PABPC1LQ4VXU2 614 aaKnown RBP17.35■□□□□ 0.37
SRM-204ENST00000475189 CBWD3Q5JTY5 395 aa17.35■□□□□ 0.37
SRM-204ENST00000475189 CBWD5Q5RIA9 395 aa17.35■□□□□ 0.37
SRM-204ENST00000475189 FAM171BQ6P995 826 aa17.35■□□□□ 0.37
SRM-204ENST00000475189 SCARA5Q6ZMJ2 495 aa17.35■□□□□ 0.37
SRM-204ENST00000475189 OTOP3Q7RTS5 596 aa17.35■□□□□ 0.37
SRM-204ENST00000475189 RNF135Q8IUD6 432 aa17.35■□□□□ 0.37
SRM-204ENST00000475189 TDRD5Q8NAT2 981 aaKnown RBP17.35■□□□□ 0.37
SRM-204ENST00000475189 OR6B3Q8NGW1 331 aa17.35■□□□□ 0.37
SRM-204ENST00000475189 SEMA4DQ92854 862 aa17.35■□□□□ 0.37
SRM-204ENST00000475189 ACSF2Q96CM8 615 aaPredicted RBP17.35■□□□□ 0.37
SRM-204ENST00000475189 SDCBP2Q9H190 292 aa17.35■□□□□ 0.37
SRM-204ENST00000475189 DNAJC25Q9H1X3 360 aa17.35■□□□□ 0.37
SRM-204ENST00000475189 APOBEC3GQ9HC16 384 aaKnown RBP17.35■□□□□ 0.37
SRM-204ENST00000475189 CRTAC1Q9NQ79 661 aa17.35■□□□□ 0.37
SRM-204ENST00000475189 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.35■□□□□ 0.37
SRM-204ENST00000475189 ABI2Q9NYB9 513 aaPredicted RBP17.35■□□□□ 0.37
SRM-204ENST00000475189 RHOP08100 348 aa17.34■□□□□ 0.37
SRM-204ENST00000475189 HAPLN1P10915 354 aaPredicted RBP17.34■□□□□ 0.37
SRM-204ENST00000475189 P4HA1P13674 534 aa17.34■□□□□ 0.37
SRM-204ENST00000475189 FSHRP23945 695 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms