RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 NAV2Q8IVL1 2488 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 H0YIV9 168 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 TRDMT1O14717 391 aaKnown RBP6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 PIAS2O75928 621 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 REC8O95072 547 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 OR5F1O95221 314 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 VAV1P15498 845 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 MC4RP32245 332 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 EVI2BP34910 448 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 PTGS2P35354 604 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 LONP1P36776 959 aaKnown RBP6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 EIF4A3P38919 411 aaKnown RBP6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 RANBP1P43487 201 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 RECQLP46063 649 aaPredicted RBP6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 TUBP50607 506 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 EIF4A1P60842 406 aaKnown RBP6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 FKBP1BP68106 108 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 CENPCQ03188 943 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 DDR1Q08345 913 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 CUL4AQ13619 759 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 KRT32Q14532 448 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 Q3ZCU0 254 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 TDRD12Q587J7 1177 aaKnown RBP6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 XKR3Q5GH77 459 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 FYB2Q5VWT5 728 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 TWF2Q6IBS0 349 aaKnown RBP6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 MIS18BP1Q6P0N0 1132 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 ZYG11AQ6WRX3 759 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 LBX2Q6XYB7 198 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 ARHGAP36Q6ZRI8 547 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 PRR23BQ6ZRT6 265 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 RHOUQ7L0Q8 258 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 ZNF598Q86UK7 904 aaKnown RBP6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 STK32CQ86UX6 486 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 WDR49Q8IV35 697 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 OR2C3Q8N628 320 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 NIPA2Q8N8Q9 360 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 BCAS4Q8TDM0 211 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 WASF1Q92558 559 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 ARHGAP45Q92619 1136 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 ZNF669Q96BR6 464 aaPredicted RBP6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 MPHOSPH9Q99550 1183 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 TXN2Q99757 166 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 TSG101Q99816 390 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 INTS7Q9NVH2 962 aaKnown RBP6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 EHD3Q9NZN3 535 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 TUBGCP4Q9UGJ1 667 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 DTNAQ9Y4J8 743 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 GMEB1Q9Y692 573 aa6.46□□□□□ -1.38
SMARCE1-208ENST00000474246 COL4A5P29400 1685 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 MUC3AQ02505 3323 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 PROB1E7EW31 1015 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 E9PMD0 336 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 KRIT1O00522 736 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 FSCN2O14926 492 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 STRNO43815 780 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 PQBP1O60828 265 aaKnown RBP6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 NIPSNAP2O75323 286 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 FSBPO95073 299 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 CHGBP05060 677 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 CDK4P11802 303 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 XRCC6P12956 609 aaKnown RBP eCLIP6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 IL11P20809 199 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 CES1P23141 567 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 ACAT1P24752 427 aaKnown RBP6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 CCNFP41002 786 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 PLCD1P51178 756 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 AFF3P51826 1226 aaKnown RBP6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 CACNB3P54284 484 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 SSTP61278 116 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 EXOSC9Q06265 439 aaKnown RBP6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 DMWDQ09019 674 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 BLMHQ13867 455 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 IKBKEQ14164 716 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 ARID5BQ14865 1188 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 SMAD1Q15797 465 aaKnown RBP6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 LONRF2Q1L5Z9 754 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 TMEM240Q5SV17 173 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 TTLL7Q6ZT98 887 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 KIAA1328Q86T90 577 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 DPP9Q86TI2 863 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 REXO1Q8N1G1 1221 aaKnown RBP6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 PHTF2Q8N3S3 785 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 ARL14Q8N4G2 192 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 ZNF565Q8N9K5 539 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 EHBP1Q8NDI1 1231 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 SLC22A8Q8TCC7 542 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 KRT35Q92764 455 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 CNKSR1Q969H4 720 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 C11orf24Q96F05 449 aaPredicted RBP6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 FUBP3Q96I24 572 aaKnown RBP eCLIP6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 DACH2Q96NX9 599 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 BCL7BQ9BQE9 202 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 NT5C1AQ9BXI3 368 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 C1QTNF2Q9BXJ5 285 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 TRIM4Q9C037 500 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 ZCWPW1Q9H0M4 648 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 ACTR3BQ9P1U1 418 aa6.45□□□□□ -1.38
SMARCE1-208ENST00000474246 TRIM33Q9UPN9 1127 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms