RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 LZTFL1Q9NQ48 299 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 DDX43Q9NXZ2 648 aaKnown RBP10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 CACNG4Q9UBN1 327 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 DNAJB4Q9UDY4 337 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 STK39Q9UEW8 545 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 CNTN6Q9UQ52 1028 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 INSL6Q9Y581 213 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 PCDHB12Q9Y5F1 795 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 PCDHA13Q9Y5I0 950 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 ADGRG1Q9Y653 693 aa10.92□□□□□ -0.66
PRPF38A-202ENST00000474048 A0A087X0T9 212 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 H7C4K7 107 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 SYN3O14994 580 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 SPTLC1O15269 473 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 TLL1O43897 1013 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 FAM228BP0C875 321 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 ATP2A2P16615 1042 aaKnown RBP10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 TYMPP19971 482 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 CA8P35219 290 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 BRCC3P46736 316 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 ZNF132P52740 706 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 BCAR1P56945 870 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 KRT17Q04695 432 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 ORC1Q13415 861 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 PTPN14Q15678 1187 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 GOLGA7BQ2TAP0 167 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 TIGD5Q53EQ6 642 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 ZNF280DQ6N043 979 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 PASD1Q8IV76 773 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 DCP1BQ8IZD4 617 aaKnown RBP10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 TMEM130Q8N3G9 435 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 UBR7Q8N806 425 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 SLC4A11Q8NBS3 891 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 B3GALNT2Q8NCR0 500 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 ZNF606Q8WXB4 792 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 SYT15Q9BQS2 421 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.91□□□□□ -0.665e-8■■■□□ 19.2
PRPF38A-202ENST00000474048 PAAF1Q9BRP4 392 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 OXCT2Q9BYC2 517 aaPredicted RBP10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 ZNF518BQ9C0D4 1074 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 SDCBP2Q9H190 292 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 NAGPAQ9UK23 515 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 NOCTQ9UK39 431 aaKnown RBP10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 CDH9Q9ULB4 789 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 INTUQ9ULD6 942 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 GUCA1BQ9UMX6 200 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 STXBP5LQ9Y2K9 1186 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 RWDD3Q9Y3V2 267 aa10.91□□□□□ -0.66
PRPF38A-202ENST00000474048 ANKRD62A6NC57 917 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 RBAK-RBAKDNI3L0D1 243 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 I3L4J1 428 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 M0QZQ0 153 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 LCA5LO95447 670 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 TUBB4AP04350 444 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 CALB1P05937 261 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 MYBL1P10243 752 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 GZMAP12544 262 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 ABCB4P21439 1286 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 ADORA2BP29275 332 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 NOP2P46087 812 aaKnown RBP10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 SLC11A1P49279 550 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 AARSP49588 968 aaKnown RBP eCLIP10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 BCAT1P54687 386 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 FMO1Q01740 532 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 CLEC16AQ2KHT3 1053 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 TMEM240Q5SV17 173 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 FAM171A1Q5VUB5 890 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 NAA35Q5VZE5 725 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 FUT10Q6P4F1 479 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 C4orf50Q6ZRC1 276 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 C3orf58Q8NDZ4 430 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 PHOSPHO2Q8TCD6 241 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 HERVK_113Q902F9 699 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 SECISBP2LQ93073 1101 aaKnown RBP10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 ZNF653Q96CK0 615 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 CYFIP2Q96F07 1278 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 PPP1R13BQ96KQ4 1090 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 RNPC3Q96LT9 517 aaKnown RBP10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 ELOVL4Q9GZR5 314 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 ST7Q9NRC1 585 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 FAM49BQ9NUQ9 324 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 SPG21Q9NZD8 308 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 HMGXB4Q9UGU5 601 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 STRIP2Q9ULQ0 834 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 PCDHGC3Q9UN70 934 aa10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 TIMM13Q9Y5L4 95 aaPredicted RBP10.9□□□□□ -0.66
PRPF38A-202ENST00000474048 SPDYE4A6NLX3 237 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 NT5C1B-RDH14C9J2C7 533 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 DDX3XO00571 662 aaKnown RBP eCLIP10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 LPXNO60711 386 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 GJB5O95377 273 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 FTLP02792 175 aaPredicted RBP10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 CYP11A1P05108 521 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 URODP06132 367 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 GALTP07902 379 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 FAM200BP0CF97 657 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 SETSIPP0DME0 302 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 CPB1P15086 417 aa10.89□□□□□ -0.67
PRPF38A-202ENST00000474048 PTPN1P18031 435 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms