RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 ITPRIPL2Q3MIP1 535 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 TMEM196Q5HYL7 178 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 GPR158Q5T848 1215 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 HAUS3Q68CZ6 603 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 RNF43Q68DV7 783 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 SMYD5Q6GMV2 418 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 CENPPQ6IPU0 288 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 TCEAL6Q6IPX3 200 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 MPZL3Q6UWV2 235 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 HAUS6Q7Z4H7 955 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 TTC9BQ8N6N2 239 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 NECAB1Q8N987 351 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 ATAD1Q8NBU5 361 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 NSUN7Q8NE18 718 aaKnown RBP5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 ERMNQ8TAM6 284 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 BPIFB1Q8TDL5 484 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 ZNF516Q92618 1163 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 TCEAL3Q969E4 200 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 GTF3C6Q969F1 213 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 PSMG2Q969U7 264 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 ZBTB45Q96K62 511 aaPredicted RBP5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 ZC3H10Q96K80 434 aaKnown RBP5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 TMEM209Q96SK2 561 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 EDEM2Q9BV94 578 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 OXCT2Q9BYC2 517 aaPredicted RBP5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 ATXN3LQ9H3M9 355 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 VPS45Q9NRW7 570 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 ZMIZ1Q9ULJ6 1067 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 ASB3Q9Y575 518 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 TIMM13Q9Y5L4 95 aaPredicted RBP5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 ADGRG1Q9Y653 693 aa5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 NUP210Q8TEM1 1887 aaPredicted RBP5.59□□□□□ -1.51
SNRNP40-204ENST00000474025 CFAP46Q8IYW2 2715 aa5.59□□□□□ -1.52
SNRNP40-204ENST00000474025 ATMQ13315 3056 aa5.59□□□□□ -1.52
SNRNP40-204ENST00000474025 EML5Q05BV3 1969 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 LNP1A1A4G5 178 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 MTMR11A4FU01 709 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 OTOL1A6NHN0 477 aaPredicted RBP5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 EIF4E1BA6NMX2 242 aaKnown RBP5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 C4orf47A7E2U8 309 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 JAK2O60674 1132 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 HIP1RO75146 1068 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 TOM1L1O75674 476 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 SOAT2O75908 522 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 FGF19O95750 216 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 CXCL8P10145 99 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 MARCKSP29966 332 aaPredicted RBP5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 LRPAP1P30533 357 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 CCT6AP40227 531 aaKnown RBP5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 MCM2P49736 904 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 NOVA1P51513 510 aaKnown RBP5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 CYP4F8P98187 520 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 MCL1Q07820 350 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 ZNF252P-AS1Q0IIN9 211 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 GRSF1Q12849 480 aaKnown RBP eCLIP5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 MAPK7Q13164 816 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 ORC2Q13416 577 aaPredicted RBP5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 MYBPC2Q14324 1141 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 ZBTB6Q15916 424 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 ME3Q16798 604 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 PLK5Q496M5 336 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 SEZ6Q53EL9 994 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 FSTL4Q6MZW2 842 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 DNAJB7Q7Z6W7 309 aaPredicted RBP5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 CAMKK1Q8N5S9 505 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 GATA6Q92908 595 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 HHIPQ96QV1 700 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 FAM83CQ9BQN1 747 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 TCHPQ9BT92 498 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 RUSC1Q9BVN2 902 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 HAPLN2Q9GZV7 340 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 SMG9Q9H0W8 520 aaKnown RBP5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 DUSP15Q9H1R2 295 aaPredicted RBP5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 TASP1Q9H6P5 420 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 HPS4Q9NQG7 708 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 KMT5AQ9NQR1 393 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 IGSF5Q9NSI5 407 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 DDX19AQ9NUU7 478 aaKnown RBP5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 POLR3BQ9NW08 1133 aaPredicted RBP5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 SLC27A5Q9Y2P5 690 aa5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 RBM19Q9Y4C8 960 aaKnown RBP5.58□□□□□ -1.52
SNRNP40-204ENST00000474025 TTC26A0AVF1 554 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 BCLAF3A2AJT9 711 aaKnown RBP5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 TRDMT1O14717 391 aaKnown RBP5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 PPEF2O14830 753 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 DCLK1O15075 740 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 SLC16A4O15374 487 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 ATG13O75143 517 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 CAVIN2O95810 425 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 TOP3BO95985 862 aaKnown RBP5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 EGFP01133 1207 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 MAPTP10636 758 aaKnown RBP5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 ARSAP15289 507 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 ATF6P18850 670 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 TYMPP19971 482 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 SPINK2P20155 84 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 CYP3A5P20815 502 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 CDC25CP30307 473 aa5.57□□□□□ -1.52
SNRNP40-204ENST00000474025 RDXP35241 583 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms