RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 HS6ST3Q8IZP7 471 aa20.3■□□□□ 0.84
PTCD3-210ENST00000473829 ST13P5Q8NFI4 369 aaPredicted RBP20.3■□□□□ 0.84
PTCD3-210ENST00000473829 SPATA18Q8TC71 538 aa20.3■□□□□ 0.84
PTCD3-210ENST00000473829 MMS19Q96T76 1030 aa20.3■□□□□ 0.84
PTCD3-210ENST00000473829 ACBD6Q9BR61 282 aa20.3■□□□□ 0.84
PTCD3-210ENST00000473829 CORO1BQ9BR76 489 aa20.3■□□□□ 0.84
PTCD3-210ENST00000473829 GTPBP4Q9BZE4 634 aaKnown RBP20.3■□□□□ 0.84
PTCD3-210ENST00000473829 ABI2Q9NYB9 513 aaPredicted RBP20.3■□□□□ 0.84
PTCD3-210ENST00000473829 EPS15L1Q9UBC2 864 aa20.3■□□□□ 0.84
PTCD3-210ENST00000473829 TECTAO75443 2155 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 IKBKBO14920 756 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 CETN3O15182 167 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 ATP2C2O75185 946 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 PTPN2P17706 415 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 ATF6P18850 670 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 WARSP23381 471 aaKnown RBP20.29■□□□□ 0.84
PTCD3-210ENST00000473829 CCNE1P24864 410 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 LMO2P25791 158 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 ATICP31939 592 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 CCR2P41597 374 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 GCLMP48507 274 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 MCCD1P59942 119 aaPredicted RBP20.29■□□□□ 0.84
PTCD3-210ENST00000473829 MYL7Q01449 175 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 TSPY1Q01534 308 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 ZNF699Q32M78 642 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 PRSS36Q5K4E3 855 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 NPAS3Q8IXF0 933 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 DCP1BQ8IZD4 617 aaKnown RBP20.29■□□□□ 0.84
PTCD3-210ENST00000473829 ING5Q8WYH8 240 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 FGF13Q92913 245 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 SYAP1Q96A49 352 aaPredicted RBP20.29■□□□□ 0.84
PTCD3-210ENST00000473829 TCEAL4Q96EI5 215 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 TSG101Q99816 390 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 MKNK1Q9BUB5 465 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 VRTNQ9H8Y1 702 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 AVENQ9NQS1 362 aaPredicted RBP20.29■□□□□ 0.84
PTCD3-210ENST00000473829 LMBRD1Q9NUN5 540 aa20.29■□□□□ 0.84
PTCD3-210ENST00000473829 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.29■□□□□ 0.84
PTCD3-210ENST00000473829 NXF1Q9UBU9 619 aaKnown RBP20.29■□□□□ 0.84
PTCD3-210ENST00000473829 PTPRDP23468 1912 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 PSMA7O14818 248 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 LAMP2P13473 410 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 KRT13P13646 458 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 CEBPBP17676 345 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 LHX1P48742 406 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 PSMC1P62191 440 aaKnown RBP20.28■□□□□ 0.84
PTCD3-210ENST00000473829 TNNC1P63316 161 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 ZXDAP98168 799 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 LRRC63Q05C16 580 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 KLHL10Q6JEL2 608 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 SPPL2BQ8TCT7 592 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 RSAD2Q8WXG1 361 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 EDAQ92838 391 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 DHTKD1Q96HY7 919 aaPredicted RBP20.28■□□□□ 0.84
PTCD3-210ENST00000473829 SEPT5Q99719 369 aaPredicted RBP20.28■□□□□ 0.84
PTCD3-210ENST00000473829 DUSP9Q99956 384 aaKnown RBP20.28■□□□□ 0.84
PTCD3-210ENST00000473829 LPIN3Q9BQK8 851 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 SMYD3Q9H7B4 428 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 MMRN2Q9H8L6 949 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 KCNK12Q9HB15 430 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 KIAA1468Q9P260 1216 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 HSFX1Q9UBD0 423 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 GTF3C4Q9UKN8 822 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 CDH7Q9ULB5 785 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 CTNND2Q9UQB3 1225 aa20.28■□□□□ 0.84
PTCD3-210ENST00000473829 MYBPHLA2RUH7 354 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 LRRN2O75325 713 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 TACC1O75410 805 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 MOSPD3O75425 235 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 HLA-DRAP01903 254 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 HAPLN1P10915 354 aaPredicted RBP20.27■□□□□ 0.84
PTCD3-210ENST00000473829 PCSK1P29120 753 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 PIK3CAP42336 1068 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 RAP1GAPP47736 663 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 FKBP3Q00688 224 aaKnown RBP20.27■□□□□ 0.84
PTCD3-210ENST00000473829 ENPEPQ07075 957 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 STIM1Q13586 685 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 MGAT5BQ3V5L5 792 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 SPOPLQ6IQ16 392 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 TTI2Q6NXR4 508 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 SCARA5Q6ZMJ2 495 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 TMC8Q8IU68 726 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 ELMOD1Q8N336 334 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 C2orf15Q8WU43 125 aaKnown RBP20.27■□□□□ 0.84
PTCD3-210ENST00000473829 ZNF512Q96ME7 567 aaPredicted RBP20.27■□□□□ 0.84
PTCD3-210ENST00000473829 SYT15Q9BQS2 421 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 PI4K2AQ9BTU6 479 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 LRRC3Q9BY71 257 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 SDCBP2Q9H190 292 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 CLSTN2Q9H4D0 955 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 CRTAC1Q9NQ79 661 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.27■□□□□ 0.84
PTCD3-210ENST00000473829 SORCS3Q9UPU3 1222 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 MRPS23Q9Y3D9 190 aaKnown RBP20.27■□□□□ 0.84
PTCD3-210ENST00000473829 PCDHB5Q9Y5E4 795 aa20.27■□□□□ 0.84
PTCD3-210ENST00000473829 SLC16A3O15427 465 aaKnown RBP20.26■□□□□ 0.83
PTCD3-210ENST00000473829 PDGFRBP09619 1106 aa20.26■□□□□ 0.83
PTCD3-210ENST00000473829 EPB41P11171 864 aaKnown RBP20.26■□□□□ 0.83
PTCD3-210ENST00000473829 ALDH1A3P47895 512 aa20.26■□□□□ 0.83
PTCD3-210ENST00000473829 GPR15P49685 360 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms