RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 DUSP12Q9UNI6 340 aa15.89■□□□□ 0.13
SSR4-208ENST00000471880 PCDHB5Q9Y5E4 795 aa15.89■□□□□ 0.13
SSR4-208ENST00000471880 LRRIQ3A6PVS8 624 aaPredicted RBP15.88■□□□□ 0.13
SSR4-208ENST00000471880 HCRTO43612 131 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 KRT13P13646 458 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 PCSK1P29120 753 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 TUFMP49411 452 aaKnown RBP15.88■□□□□ 0.13
SSR4-208ENST00000471880 HTR4Q13639 388 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 KCNB1Q14721 858 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 WDR72Q3MJ13 1102 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 ISM2Q6H9L7 571 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 ITIH5Q86UX2 942 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 LRRTM3Q86VH5 581 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 OSTM1Q86WC4 334 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 SPATA2LQ8IUW3 424 aaPredicted RBP15.88■□□□□ 0.13
SSR4-208ENST00000471880 SLC44A3Q8N4M1 653 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 FBXL6Q8N531 539 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 TOP6BLQ8N6T0 577 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 SPPL2BQ8TCT7 592 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 GPR152Q8TDT2 470 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 FGF14Q92915 247 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 NXPE3Q969Y0 559 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 LPIN3Q9BQK8 851 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 SNX25Q9H3E2 840 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 GDAP2Q9NXN4 497 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 DENND4CQ5VZ89 1909 aa15.88■□□□□ 0.13
SSR4-208ENST00000471880 A0A1W2PRU2 124 aa15.87■□□□□ 0.13
SSR4-208ENST00000471880 NRG2O14511 850 aaPredicted RBP15.87■□□□□ 0.13
SSR4-208ENST00000471880 CST3P01034 146 aaPredicted RBP15.87■□□□□ 0.13
SSR4-208ENST00000471880 PDGFRBP09619 1106 aa15.87■□□□□ 0.13
SSR4-208ENST00000471880 RPL13P26373 211 aaKnown RBP15.87■□□□□ 0.13
SSR4-208ENST00000471880 CCR2P41597 374 aa15.87■□□□□ 0.13
SSR4-208ENST00000471880 LHX1P48742 406 aa15.87■□□□□ 0.13
SSR4-208ENST00000471880 MYL6P60660 151 aa15.87■□□□□ 0.13
SSR4-208ENST00000471880 PSMC1P62191 440 aaKnown RBP15.87■□□□□ 0.13
SSR4-208ENST00000471880 TEAD2Q15562 447 aa15.87■□□□□ 0.13
SSR4-208ENST00000471880 NFE2Q16621 373 aaPredicted RBP15.87■□□□□ 0.13
SSR4-208ENST00000471880 SOWAHAQ2M3V2 549 aa15.87■□□□□ 0.13
SSR4-208ENST00000471880 ZNF699Q32M78 642 aa15.87■□□□□ 0.13
SSR4-208ENST00000471880 SCARA5Q6ZMJ2 495 aa15.87■□□□□ 0.13
SSR4-208ENST00000471880 SIX5Q8N196 739 aa15.87■□□□□ 0.13
SSR4-208ENST00000471880 GUF1Q8N442 669 aaKnown RBP15.87■□□□□ 0.13
SSR4-208ENST00000471880 OR6B3Q8NGW1 331 aa15.87■□□□□ 0.13
SSR4-208ENST00000471880 CXorf38Q8TB03 319 aa15.87■□□□□ 0.13
SSR4-208ENST00000471880 C2orf15Q8WU43 125 aaKnown RBP15.87■□□□□ 0.13
SSR4-208ENST00000471880 ZNF516Q92618 1163 aa15.87■□□□□ 0.13
SSR4-208ENST00000471880 GCNAQ96QF7 691 aa15.87■□□□□ 0.13
SSR4-208ENST00000471880 RPP25Q9BUL9 199 aaKnown RBP15.87■□□□□ 0.13
SSR4-208ENST00000471880 ATXN3LQ9H3M9 355 aa15.87■□□□□ 0.13
SSR4-208ENST00000471880 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.87■□□□□ 0.131e-7■■■■■ 115.4
SSR4-208ENST00000471880 TMLHEQ9NVH6 421 aa15.87■□□□□ 0.13
SSR4-208ENST00000471880 CHMP5Q9NZZ3 219 aa15.87■□□□□ 0.13
SSR4-208ENST00000471880 GTF3C4Q9UKN8 822 aa15.87■□□□□ 0.13
SSR4-208ENST00000471880 MAGED2Q9UNF1 606 aaPredicted RBP15.87■□□□□ 0.13
SSR4-208ENST00000471880 GADD45BO75293 160 aaPredicted RBP15.86■□□□□ 0.13
SSR4-208ENST00000471880 SRFP11831 508 aa15.86■□□□□ 0.13
SSR4-208ENST00000471880 GABRR2P28476 465 aa15.86■□□□□ 0.13
SSR4-208ENST00000471880 DLG4P78352 724 aa15.86■□□□□ 0.13
SSR4-208ENST00000471880 CYP27A1Q02318 531 aa15.86■□□□□ 0.13
SSR4-208ENST00000471880 SMARCB1Q12824 385 aa15.86■□□□□ 0.13
SSR4-208ENST00000471880 SNW1Q13573 536 aaKnown RBP15.86■□□□□ 0.13
SSR4-208ENST00000471880 CCDC142Q17RM4 750 aa15.86■□□□□ 0.13
SSR4-208ENST00000471880 INTS6LQ5JSJ4 861 aaKnown RBP15.86■□□□□ 0.13
SSR4-208ENST00000471880 TDRD10Q5VZ19 366 aaKnown RBP15.86■□□□□ 0.13
SSR4-208ENST00000471880 DNAJB7Q7Z6W7 309 aaPredicted RBP15.86■□□□□ 0.13
SSR4-208ENST00000471880 SLC9A9Q8IVB4 645 aa15.86■□□□□ 0.13
SSR4-208ENST00000471880 SCN4BQ8IWT1 228 aa15.86■□□□□ 0.13
SSR4-208ENST00000471880 FAM186BQ8IYM0 893 aa15.86■□□□□ 0.13
SSR4-208ENST00000471880 LEMD2Q8NC56 503 aa15.86■□□□□ 0.13
SSR4-208ENST00000471880 PLEKHO2Q8TD55 490 aa15.86■□□□□ 0.13
SSR4-208ENST00000471880 PARD3BQ8TEW8 1205 aa15.86■□□□□ 0.13
SSR4-208ENST00000471880 SYAP1Q96A49 352 aaPredicted RBP15.86■□□□□ 0.13
SSR4-208ENST00000471880 ELMO3Q96BJ8 720 aa15.86■□□□□ 0.13
SSR4-208ENST00000471880 EEF2KMTQ96G04 330 aa15.86■□□□□ 0.13
SSR4-208ENST00000471880 TSG101Q99816 390 aa15.86■□□□□ 0.13
SSR4-208ENST00000471880 SYT15Q9BQS2 421 aa15.86■□□□□ 0.13
SSR4-208ENST00000471880 ACBD6Q9BR61 282 aa15.86■□□□□ 0.13
SSR4-208ENST00000471880 GDE1Q9NZC3 331 aa15.86■□□□□ 0.13
SSR4-208ENST00000471880 OBSL1O75147 1896 aa15.86■□□□□ 0.13
SSR4-208ENST00000471880 ANHXE9PGG2 379 aa15.85■□□□□ 0.13
SSR4-208ENST00000471880 ATP2C2O75185 946 aa15.85■□□□□ 0.13
SSR4-208ENST00000471880 TRIM49P0CI25 452 aa15.85■□□□□ 0.13
SSR4-208ENST00000471880 TRIM49CP0CI26 452 aa15.85■□□□□ 0.13
SSR4-208ENST00000471880 ATF6P18850 670 aa15.85■□□□□ 0.13
SSR4-208ENST00000471880 PIK3CAP42336 1068 aa15.85■□□□□ 0.13
SSR4-208ENST00000471880 GPR15P49685 360 aa15.85■□□□□ 0.13
SSR4-208ENST00000471880 VAMP7P51809 220 aa15.85■□□□□ 0.13
SSR4-208ENST00000471880 AP3M2P53677 418 aa15.85■□□□□ 0.13
SSR4-208ENST00000471880 VCPP55072 806 aaKnown RBP15.85■□□□□ 0.13
SSR4-208ENST00000471880 ADAM9Q13443 819 aa15.85■□□□□ 0.13
SSR4-208ENST00000471880 NCOA4Q13772 614 aa15.85■□□□□ 0.13
SSR4-208ENST00000471880 ZNF667Q5HYK9 610 aa15.85■□□□□ 0.13
SSR4-208ENST00000471880 PRSS36Q5K4E3 855 aa15.85■□□□□ 0.13
SSR4-208ENST00000471880 SDHAF4Q5VUM1 108 aa15.85■□□□□ 0.13
SSR4-208ENST00000471880 BMP8AQ7Z5Y6 402 aa15.85■□□□□ 0.13
SSR4-208ENST00000471880 GPIHBP1Q8IV16 184 aa15.85■□□□□ 0.13
SSR4-208ENST00000471880 STKLD1Q8NE28 680 aa15.85■□□□□ 0.13
SSR4-208ENST00000471880 ENGASEQ8NFI3 743 aa15.85■□□□□ 0.13
SSR4-208ENST00000471880 MRPL45Q9BRJ2 306 aaKnown RBP15.85■□□□□ 0.13
SSR4-208ENST00000471880 DNAJC25Q9H1X3 360 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms