RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 RHOBTB1O94844 696 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 SESN2P58004 480 aaPredicted RBP8.97□□□□□ -0.97
CD47-204ENST00000471694 ATAT1Q5SQI0 421 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 SYCP2LQ5T4T6 812 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 GAS2L3Q86XJ1 694 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 PTPRN2Q92932 1015 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 LY9Q9HBG7 655 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 GPRC5DQ9NZD1 345 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 RUVBL2Q9Y230 463 aaKnown RBP8.97□□□□□ -0.97
CD47-204ENST00000471694 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.97□□□□□ -0.97
CD47-204ENST00000471694 KPNA3O00505 521 aaPredicted RBP8.97□□□□□ -0.97
CD47-204ENST00000471694 TCF3P15923 654 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 PSMA3P25788 255 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 TRPC1P48995 793 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 TMPRSS15P98073 1019 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 MED21Q13503 144 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 EFTUD2Q15029 972 aaKnown RBP eCLIP8.97□□□□□ -0.97
CD47-204ENST00000471694 TEAD4Q15561 434 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 TTLL9Q3SXZ7 439 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 OVOS1Q6IE37 1185 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 MKNK1Q9BUB5 465 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 ERCC6L2Q5T890 1561 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 KDM4FA0A1W2PPD8 638 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 A6NNZ2 444 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 PCNAP12004 261 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 TUBB8Q3ZCM7 444 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 ALKBH5Q6P6C2 394 aaKnown RBP8.97□□□□□ -0.97
CD47-204ENST00000471694 ARMC2Q8NEN0 867 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 SPTLC3Q9NUV7 552 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 PPP2R2CQ9Y2T4 447 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 GPSM3Q9Y4H4 160 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 KRT33AO76009 404 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 RHOBTB3O94955 611 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 NUDT14O95848 222 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 FGFR4P22455 802 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 ALDH18A1P54886 795 aaKnown RBP8.97□□□□□ -0.97
CD47-204ENST00000471694 IQSEC1Q6DN90 963 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 PPM1NQ8N819 430 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 BLOC1S5Q8TDH9 187 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 ZDHHC15Q96MV8 337 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 DDIT4Q9NX09 232 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 H2AFY2Q9P0M6 372 aaPredicted RBP8.97□□□□□ -0.97
CD47-204ENST00000471694 M0QYT0 321 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 CYP26A1O43174 497 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 ADCY6O43306 1168 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 DSG3P32926 999 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 MAP3K10Q02779 954 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 FBXL19Q6PCT2 694 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 PROM2Q8N271 834 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 KCTD17Q8N5Z5 321 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 SNTG2Q9NY99 539 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 NCDNQ9UBB6 729 aa8.97□□□□□ -0.97
CD47-204ENST00000471694 TIMM13Q9Y5L4 95 aaPredicted RBP8.97□□□□□ -0.97
CD47-204ENST00000471694 PNPLA6Q8IY17 1366 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 SYN1P17600 705 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 CCT5P48643 541 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 GPS1Q13098 491 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 ZKSCAN8Q15776 578 aaPredicted RBP8.96□□□□□ -0.97
CD47-204ENST00000471694 AAK1Q2M2I8 961 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 ALFQ53S48 1182 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 TAF2Q6P1X5 1199 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 C16orf59Q7L2K0 433 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 CYP4X1Q8N118 509 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 CPA5Q8WXQ8 436 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 WNK4Q96J92 1243 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 RSAD1Q9HA92 442 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 PXMP2Q9NR77 195 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 WWOXQ9NZC7 414 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 GTF2A1LQ9UNN4 478 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 TET3O43151 1660 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 GOLGA8KD6RF30 607 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 FTLP02792 175 aaPredicted RBP8.96□□□□□ -0.97
CD47-204ENST00000471694 PTPN3P26045 913 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 GPC1P35052 558 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 FKBP1BP68106 108 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 MORF4L2Q15014 288 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 PTPN21Q16825 1174 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 CD302Q8IX05 232 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 PKD2L2Q9NZM6 624 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 KLHL3Q9UH77 587 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 PACSIN2Q9UNF0 486 aaPredicted RBP8.96□□□□□ -0.97
CD47-204ENST00000471694 RWDD3Q9Y3V2 267 aa8.96□□□□□ -0.97
CD47-204ENST00000471694 PALMO75781 387 aa8.96□□□□□ -0.98
CD47-204ENST00000471694 PDHBP11177 359 aa8.96□□□□□ -0.98
CD47-204ENST00000471694 C2orf54Q08AI8 447 aa8.96□□□□□ -0.98
CD47-204ENST00000471694 SNRNP35Q16560 246 aaKnown RBP8.96□□□□□ -0.98
CD47-204ENST00000471694 NFE2Q16621 373 aaPredicted RBP8.96□□□□□ -0.98
CD47-204ENST00000471694 UAP1L1Q3KQV9 507 aa8.96□□□□□ -0.98
CD47-204ENST00000471694 PABPC1LQ4VXU2 614 aaKnown RBP8.96□□□□□ -0.98
CD47-204ENST00000471694 CPA6Q8N4T0 437 aa8.96□□□□□ -0.98
CD47-204ENST00000471694 RBBP8NLQ8NC74 664 aaPredicted RBP8.96□□□□□ -0.98
CD47-204ENST00000471694 EXD1Q8NHP7 514 aa8.96□□□□□ -0.98
CD47-204ENST00000471694 PI4K2AQ9BTU6 479 aa8.96□□□□□ -0.98
CD47-204ENST00000471694 OSBPL10Q9BXB5 764 aa8.96□□□□□ -0.98
CD47-204ENST00000471694 FAM32AQ9Y421 112 aaKnown RBP8.96□□□□□ -0.98
CD47-204ENST00000471694 CYP7B1O75881 506 aa8.96□□□□□ -0.98
CD47-204ENST00000471694 TUFMP49411 452 aaKnown RBP8.96□□□□□ -0.98
CD47-204ENST00000471694 GEMIN4P57678 1058 aaKnown RBP8.96□□□□□ -0.98
CD47-204ENST00000471694 XRCC4Q13426 336 aa8.96□□□□□ -0.98
CD47-204ENST00000471694 SEZ6Q53EL9 994 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms