RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 E9PMD0 336 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 ST8SIA5O15466 376 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 NEFLP07196 543 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 ODC1P11926 461 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 PLS3P13797 630 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 TYMPP19971 482 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 TGM1P22735 817 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 LRPAP1P30533 357 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 HOXA6P31267 233 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 ABCD1P33897 745 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 PRPHP41219 470 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 SATB1Q01826 763 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 MCL1Q07820 350 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 GPR17Q13304 367 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 MYBPC2Q14324 1141 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 VEPH1Q14D04 833 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 LPAL2Q16609 132 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 ECM1Q16610 540 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 PPM1JQ5JR12 505 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 OVOS1Q6IE37 1185 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 RINT1Q6NUQ1 792 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 ARMCX5Q6P1M9 558 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 PRR23CQ6ZRP0 262 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 CCDC83Q8IWF9 413 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 DAW1Q8N136 415 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 SNIP1Q8TAD8 396 aaKnown RBP9.91□□□□□ -0.82
CPSF4-211ENST00000471455 SHKBP1Q8TBC3 707 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 FOXJ1Q92949 421 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 EXOC4Q96A65 974 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 CDK5RAP3Q96JB5 506 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 ZSCAN31Q96LW9 406 aaPredicted RBP9.91□□□□□ -0.82
CPSF4-211ENST00000471455 ZSWIM3Q96MP5 696 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 NTPCRQ9BSD7 190 aaKnown RBP9.91□□□□□ -0.82
CPSF4-211ENST00000471455 RUSC1Q9BVN2 902 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 POLD4Q9HCU8 107 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 SEMA4GQ9NTN9 838 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 THG1LQ9NWX6 298 aaKnown RBP9.91□□□□□ -0.82
CPSF4-211ENST00000471455 LARSQ9P2J5 1176 aaKnown RBP9.91□□□□□ -0.82
CPSF4-211ENST00000471455 HSFX1Q9UBD0 423 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 TUBGCP4Q9UGJ1 667 aa9.91□□□□□ -0.82
CPSF4-211ENST00000471455 PDCD11Q14690 1871 aaKnown RBP9.9□□□□□ -0.82
CPSF4-211ENST00000471455 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.9□□□□□ -0.82
CPSF4-211ENST00000471455 MYBPHLA2RUH7 354 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 SLC38A8A6NNN8 435 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 CHURC1-FNTBB4DL54 471 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 SPECC1L-ADORA2AF8WAN1 911 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 ARNTLO00327 626 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 ABLIM1O14639 778 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 MOSPD3O75425 235 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 CXCL8P10145 99 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 MAPTP10636 758 aaKnown RBP9.9□□□□□ -0.82
CPSF4-211ENST00000471455 GJA1P17302 382 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 WEE1P30291 646 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 CDC25CP30307 473 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 FNTBP49356 437 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 AARSP49588 968 aaKnown RBP eCLIP9.9□□□□□ -0.82
CPSF4-211ENST00000471455 LIG4P49917 911 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 AMPD2Q01433 879 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 MAPK7Q13164 816 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 TAF12Q16514 161 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 SLC10A6Q3KNW5 377 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 IL31Q6EBC2 164 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 C1orf186Q6ZWK4 172 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 TAS1R3Q7RTX0 852 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 CD302Q8IX05 232 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 C4orf32Q8N8J7 132 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 TMEM161BQ8NDZ6 487 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 PGLYRP2Q96PD5 576 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 ATXN3LQ9H3M9 355 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 SH2B1Q9NRF2 756 aaPredicted RBP9.9□□□□□ -0.82
CPSF4-211ENST00000471455 DSEQ9UL01 958 aa9.9□□□□□ -0.82
CPSF4-211ENST00000471455 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.9□□□□□ -0.82
CPSF4-211ENST00000471455 CNOT1A5YKK6 2376 aaKnown RBP9.9□□□□□ -0.82
CPSF4-211ENST00000471455 CHD8Q9HCK8 2581 aa9.89□□□□□ -0.83
CPSF4-211ENST00000471455 MAP1BP46821 2468 aaKnown RBP9.89□□□□□ -0.83
CPSF4-211ENST00000471455 HNRNPDLO14979 420 aaKnown RBP9.89□□□□□ -0.83
CPSF4-211ENST00000471455 ATG13O75143 517 aa9.89□□□□□ -0.83
CPSF4-211ENST00000471455 U2AF2P26368 475 aaKnown RBP eCLIP9.89□□□□□ -0.83
CPSF4-211ENST00000471455 TUFMP49411 452 aaKnown RBP9.89□□□□□ -0.83
CPSF4-211ENST00000471455 ST3GAL1Q11201 340 aa9.89□□□□□ -0.83
CPSF4-211ENST00000471455 SMARCB1Q12824 385 aa9.89□□□□□ -0.83
CPSF4-211ENST00000471455 DUSP4Q13115 394 aa9.89□□□□□ -0.83
CPSF4-211ENST00000471455 ZRSR1Q15695 479 aaKnown RBP9.89□□□□□ -0.83
CPSF4-211ENST00000471455 ST3GAL2Q16842 350 aa9.89□□□□□ -0.83
CPSF4-211ENST00000471455 GPR158Q5T848 1215 aa9.89□□□□□ -0.83
CPSF4-211ENST00000471455 CENPPQ6IPU0 288 aa9.89□□□□□ -0.83
CPSF4-211ENST00000471455 WDR5BQ86VZ2 330 aa9.89□□□□□ -0.83
CPSF4-211ENST00000471455 TMC8Q8IU68 726 aa9.89□□□□□ -0.83
CPSF4-211ENST00000471455 ARID3BQ8IVW6 561 aaPredicted RBP9.89□□□□□ -0.83
CPSF4-211ENST00000471455 C12orf50Q8NA57 414 aaPredicted RBP9.89□□□□□ -0.83
CPSF4-211ENST00000471455 EHBP1Q8NDI1 1231 aa9.89□□□□□ -0.83
CPSF4-211ENST00000471455 BPIFB1Q8TDL5 484 aa9.89□□□□□ -0.83
CPSF4-211ENST00000471455 C2orf15Q8WU43 125 aaKnown RBP9.89□□□□□ -0.83
CPSF4-211ENST00000471455 PSMG2Q969U7 264 aa9.89□□□□□ -0.83
CPSF4-211ENST00000471455 LOXL4Q96JB6 756 aa9.89□□□□□ -0.83
CPSF4-211ENST00000471455 CHAMP1Q96JM3 812 aa9.89□□□□□ -0.83
CPSF4-211ENST00000471455 RPF1Q9H9Y2 349 aaKnown RBP9.89□□□□□ -0.83
CPSF4-211ENST00000471455 NUP210Q8TEM1 1887 aaPredicted RBP9.88□□□□□ -0.83
CPSF4-211ENST00000471455 CCDC163A0A0D9SF12 145 aa9.88□□□□□ -0.83
CPSF4-211ENST00000471455 TTC26A0AVF1 554 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms