RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 GUCY1A2P33402 732 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 TRHRP34981 398 aaPredicted RBP5.41□□□□□ -1.54
COL3A1-205ENST00000470167 GRIA4P48058 902 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 KRT6CP48668 564 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 GDI2P50395 445 aaKnown RBP5.41□□□□□ -1.54
COL3A1-205ENST00000470167 ADCY7P51828 1080 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 ZNF280AP59817 542 aaPredicted RBP5.41□□□□□ -1.54
COL3A1-205ENST00000470167 SRP54P61011 504 aaKnown RBP5.41□□□□□ -1.54
COL3A1-205ENST00000470167 GPLD1P80108 840 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 HPCAP84074 193 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 CYP4F8P98187 520 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 ATP11AP98196 1134 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 MPP1Q00013 466 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 TFAP4Q01664 338 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 SPAG1Q07617 926 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 CSTF3Q12996 717 aaKnown RBP5.41□□□□□ -1.54
COL3A1-205ENST00000470167 KCNAB2Q13303 367 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 XRCC4Q13426 336 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 ADAM9Q13443 819 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 TRPC3Q13507 836 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 CUL2Q13617 745 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 SCARB2Q14108 478 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 DOC2AQ14183 400 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 ERV3-1Q14264 604 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 PTK2BQ14289 1009 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 RGS21Q2M5E4 152 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 DALRD3Q5D0E6 543 aaKnown RBP5.41□□□□□ -1.54
COL3A1-205ENST00000470167 GPATCH4Q5T3I0 446 aaKnown RBP5.41□□□□□ -1.54
COL3A1-205ENST00000470167 CCNJQ5T5M9 372 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 C12orf60Q5U649 245 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 METTL21CQ5VZV1 264 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 PDPK2PQ6A1A2 396 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 TXNDC11Q6PKC3 985 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 SEZ6L2Q6UXD5 910 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 DTHD1Q6ZMT9 781 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 KIF6Q6ZMV9 814 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 UNC13DQ70J99 1090 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 SV2AQ7L0J3 742 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 RAB11FIP2Q7L804 512 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 NUP54Q7Z3B4 507 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 STX12Q86Y82 276 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 LRRC34Q8IZ02 419 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 SLC38A6Q8IZM9 456 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 NATD1Q8N6N6 113 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 GPR161Q8N6U8 529 aaKnown RBP5.41□□□□□ -1.54
COL3A1-205ENST00000470167 CCNYL1Q8N7R7 359 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 PPFIBP2Q8ND30 876 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 FLAD1Q8NFF5 587 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 LINS1Q8NG48 757 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 MYCBPAPQ8TBZ2 947 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 CALML6Q8TD86 181 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 SEPT1Q8WYJ6 367 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 KCTD13Q8WZ19 329 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 P3H4Q92791 437 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 C19orf60Q96EN9 201 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 VPS39Q96JC1 886 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 C7orf34Q96L11 122 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 CEP170P1Q96L14 293 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 FGD4Q96M96 766 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 TMEM68Q96MH6 324 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 ZNF560Q96MR9 790 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 RUNDC3BQ96NL0 473 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 CLIC6Q96NY7 704 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 OPALINQ96PE5 141 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 ASB2Q96Q27 587 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 BPIFA3Q9BQP9 254 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 CCDC77Q9BR77 488 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 SDF4Q9BRK5 362 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 LLPHQ9BRT6 129 aaKnown RBP5.41□□□□□ -1.54
COL3A1-205ENST00000470167 TRIM56Q9BRZ2 755 aaKnown RBP5.41□□□□□ -1.54
COL3A1-205ENST00000470167 NTMT1Q9BV86 223 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 SARGQ9BW04 601 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 CINPQ9BW66 212 aaPredicted RBP5.41□□□□□ -1.54
COL3A1-205ENST00000470167 OSBPL1AQ9BXW6 950 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 PDE11AQ9HCR9 933 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 VTA1Q9NP79 307 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 COPRSQ9NQ92 184 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 DZANK1Q9NVP4 752 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 DNAJB12Q9NXW2 375 aaKnown RBP5.41□□□□□ -1.54
COL3A1-205ENST00000470167 DTLQ9NZJ0 730 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 SAMD15Q9P1V8 674 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 KCNN3Q9UGI6 736 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 RNF112Q9ULX5 631 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 L3MBTL1Q9Y468 752 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 PCDHGA2Q9Y5H1 932 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 STON1Q9Y6Q2 735 aa5.41□□□□□ -1.54
COL3A1-205ENST00000470167 ZNF608Q9ULD9 1512 aaPredicted RBP5.4□□□□□ -1.54
COL3A1-205ENST00000470167 CTAGE9A4FU28 777 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 EFCAB8A8MWE9 144 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 PRR5-ARHGAP8B1AHC4 643 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 POTECB2RU33 542 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 ALG1L2C9J202 215 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 F6X3S4 739 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 C2CD2LO14523 706 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 AP3D1O14617 1153 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 IKBKBO14920 756 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 XPO1O14980 1071 aaKnown RBP5.4□□□□□ -1.54
COL3A1-205ENST00000470167 AREL1O15033 823 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 RAD51BO15315 384 aa5.4□□□□□ -1.54
COL3A1-205ENST00000470167 TSPAN3O60637 253 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms