RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 TOR1AIP2Q8NFQ8 470 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 FBXO41Q8TF61 875 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 TSR2Q969E8 191 aaKnown RBP4.96□□□□□ -1.62
BRCA2-202ENST00000470094 HEPHQ9BQS7 1158 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 TMEM60Q9H2L4 133 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 SMOC2Q9H3U7 446 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 FAM204AQ9H8W3 233 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 MED16Q9Y2X0 877 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 PLEKHM1Q9Y4G2 1056 aa4.96□□□□□ -1.62
BRCA2-202ENST00000470094 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.96□□□□□ -1.62
BRCA2-202ENST00000470094 CAPN8A6NHC0 703 aa4.95□□□□□ -1.62
BRCA2-202ENST00000470094 PHGDHO43175 533 aaKnown RBP4.95□□□□□ -1.62
BRCA2-202ENST00000470094 DNAJB5O75953 348 aa4.95□□□□□ -1.62
BRCA2-202ENST00000470094 GRPP07492 148 aa4.95□□□□□ -1.62
BRCA2-202ENST00000470094 PPP3CBP16298 524 aa4.95□□□□□ -1.62
BRCA2-202ENST00000470094 CXCR5P32302 372 aa4.95□□□□□ -1.62
BRCA2-202ENST00000470094 FOLR3P41439 243 aa4.95□□□□□ -1.62
BRCA2-202ENST00000470094 GCLCP48506 637 aaPredicted RBP4.95□□□□□ -1.62
BRCA2-202ENST00000470094 GFOD2Q3B7J2 385 aa4.95□□□□□ -1.62
BRCA2-202ENST00000470094 VWA1Q6PCB0 445 aa4.95□□□□□ -1.62
BRCA2-202ENST00000470094 WDR75Q8IWA0 830 aaKnown RBP4.95□□□□□ -1.62
BRCA2-202ENST00000470094 GPR150Q8NGU9 434 aa4.95□□□□□ -1.62
BRCA2-202ENST00000470094 ACTRT2Q8TDY3 377 aa4.95□□□□□ -1.62
BRCA2-202ENST00000470094 LPIN2Q92539 896 aa4.95□□□□□ -1.62
BRCA2-202ENST00000470094 FBXL20Q96IG2 436 aa4.95□□□□□ -1.62
BRCA2-202ENST00000470094 MRGPRX1Q96LB2 322 aa4.95□□□□□ -1.62
BRCA2-202ENST00000470094 NT5C1BQ96P26 610 aa4.95□□□□□ -1.62
BRCA2-202ENST00000470094 ZMAT3Q9HA38 289 aaKnown RBP4.95□□□□□ -1.62
BRCA2-202ENST00000470094 VSTM5A8MXK1 200 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 MYO1CO00159 1063 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 PROM1O43490 865 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 LMNAP02545 664 aaKnown RBP4.94□□□□□ -1.62
BRCA2-202ENST00000470094 THP07101 528 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 NPR1P16066 1061 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 TYRP1P17643 537 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 ATF3P18847 181 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 CD6P30203 668 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 ADRA1BP35368 520 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 PLA2G5P39877 138 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 INHBEP58166 350 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 COL10A1Q03692 680 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 ITIH3Q06033 890 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 NBPF8Q3BBV2 869 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 LONRF3Q496Y0 759 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 OLFML1Q6UWY5 402 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 LAYNQ6UX15 382 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 ZNF783Q6ZMS7 281 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 MAEAQ7L5Y9 396 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 FMNL3Q8IVF7 1028 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 MYCBPAPQ8TBZ2 947 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 KBTBD7Q8WVZ9 684 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 PGBD1Q96JS3 809 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 SLC46A1Q96NT5 459 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 MOGAT1Q96PD6 335 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 OSBPL9Q96SU4 736 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 P2RX7Q99572 595 aaKnown RBP4.94□□□□□ -1.62
BRCA2-202ENST00000470094 TPSD1Q9BZJ3 242 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 TTYH3Q9C0H2 523 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 HESX1Q9UBX0 185 aa4.94□□□□□ -1.62
BRCA2-202ENST00000470094 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.94□□□□□ -1.62
BRCA2-202ENST00000470094 MPPED1O15442 326 aa4.93□□□□□ -1.62
BRCA2-202ENST00000470094 ORC4O43929 436 aa4.93□□□□□ -1.62
BRCA2-202ENST00000470094 ATXN1LP0C7T5 689 aaKnown RBP4.93□□□□□ -1.62
BRCA2-202ENST00000470094 KITP10721 976 aa4.93□□□□□ -1.62
BRCA2-202ENST00000470094 TOB1P50616 345 aaPredicted RBP4.93□□□□□ -1.62
BRCA2-202ENST00000470094 NXPH1P58417 271 aa4.93□□□□□ -1.62
BRCA2-202ENST00000470094 SATB1Q01826 763 aa4.93□□□□□ -1.62
BRCA2-202ENST00000470094 BOP1Q14137 746 aaKnown RBP4.93□□□□□ -1.62
BRCA2-202ENST00000470094 ZNF169Q14929 603 aaPredicted RBP4.93□□□□□ -1.62
BRCA2-202ENST00000470094 IQCB1Q15051 598 aa4.93□□□□□ -1.62
BRCA2-202ENST00000470094 LLGL1Q15334 1064 aa4.93□□□□□ -1.62
BRCA2-202ENST00000470094 RBM20Q5T481 1227 aaKnown RBP4.93□□□□□ -1.62
BRCA2-202ENST00000470094 KAZNQ674X7 775 aa4.93□□□□□ -1.62
BRCA2-202ENST00000470094 PPP4R4Q6NUP7 873 aa4.93□□□□□ -1.62
BRCA2-202ENST00000470094 TSHZ1Q6ZSZ6 1077 aa4.93□□□□□ -1.62
BRCA2-202ENST00000470094 KIAA0319LQ8IZA0 1049 aa4.93□□□□□ -1.62
BRCA2-202ENST00000470094 OR6B3Q8NGW1 331 aa4.93□□□□□ -1.62
BRCA2-202ENST00000470094 CAGE1Q8TC20 777 aa4.93□□□□□ -1.62
BRCA2-202ENST00000470094 ZG16BQ96DA0 208 aa4.93□□□□□ -1.62
BRCA2-202ENST00000470094 SPATA5L1Q9BVQ7 753 aa4.93□□□□□ -1.62
BRCA2-202ENST00000470094 TRIM54Q9BYV2 358 aa4.93□□□□□ -1.62
BRCA2-202ENST00000470094 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.93□□□□□ -1.62
BRCA2-202ENST00000470094 C11orf21Q9P2W6 132 aa4.93□□□□□ -1.62
BRCA2-202ENST00000470094 ZNHIT2Q9UHR6 403 aa4.93□□□□□ -1.62
BRCA2-202ENST00000470094 TMX2Q9Y320 296 aa4.93□□□□□ -1.62
BRCA2-202ENST00000470094 POLR2AP24928 1970 aaKnown RBP4.93□□□□□ -1.62
BRCA2-202ENST00000470094 CCDC151A5D8V7 595 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 CFAP69A5D8W1 941 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 NUDT3O95989 172 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 CHRM2P08172 466 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 BMP5P22003 454 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 SLC7A1P30825 629 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 VIPR2P41587 438 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 PXNP49023 591 aaPredicted RBP4.92□□□□□ -1.62
BRCA2-202ENST00000470094 CACNB3P54284 484 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 UCP3P55916 312 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 LOXL3P58215 753 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 PTPRRQ15256 657 aa4.92□□□□□ -1.62
BRCA2-202ENST00000470094 CNN3Q15417 329 aaKnown RBP4.92□□□□□ -1.62
BRCA2-202ENST00000470094 SMN1Q16637 294 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms