RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 BRSK2Q8IWQ3 736 aa9.97□□□□□ -0.81
TOP3A-203ENST00000469739 JOSD2Q8TAC2 188 aa9.97□□□□□ -0.81
TOP3A-203ENST00000469739 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.97□□□□□ -0.81
TOP3A-203ENST00000469739 SLC10A4Q96EP9 437 aa9.97□□□□□ -0.81
TOP3A-203ENST00000469739 THOC1Q96FV9 657 aaKnown RBP9.97□□□□□ -0.81
TOP3A-203ENST00000469739 DDX27Q96GQ7 796 aaKnown RBP9.97□□□□□ -0.81
TOP3A-203ENST00000469739 PABPC3Q9H361 631 aaKnown RBP9.97□□□□□ -0.81
TOP3A-203ENST00000469739 CDC42EP4Q9H3Q1 356 aaKnown RBP9.97□□□□□ -0.81
TOP3A-203ENST00000469739 KCNK9Q9NPC2 374 aa9.97□□□□□ -0.81
TOP3A-203ENST00000469739 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.97□□□□□ -0.81
TOP3A-203ENST00000469739 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.97□□□□□ -0.81
TOP3A-203ENST00000469739 A0A0G2JLL6 359 aaPredicted RBP9.96□□□□□ -0.81
TOP3A-203ENST00000469739 OGTO15294 1046 aa9.96□□□□□ -0.81
TOP3A-203ENST00000469739 HCRTO43612 131 aa9.96□□□□□ -0.81
TOP3A-203ENST00000469739 ASS1P00966 412 aaKnown RBP9.96□□□□□ -0.81
TOP3A-203ENST00000469739 EPHX2P34913 555 aa9.96□□□□□ -0.81
TOP3A-203ENST00000469739 RFC1P35251 1148 aaPredicted RBP9.96□□□□□ -0.81
TOP3A-203ENST00000469739 RTP1P59025 263 aa9.96□□□□□ -0.81
TOP3A-203ENST00000469739 BPIFB4P59827 614 aa9.96□□□□□ -0.81
TOP3A-203ENST00000469739 PPP2R2AP63151 447 aa9.96□□□□□ -0.81
TOP3A-203ENST00000469739 CENPCQ03188 943 aa9.96□□□□□ -0.81
TOP3A-203ENST00000469739 GRIK3Q13003 919 aa9.96□□□□□ -0.81
TOP3A-203ENST00000469739 PTGISQ16647 500 aa9.96□□□□□ -0.81
TOP3A-203ENST00000469739 NOL9Q5SY16 702 aaKnown RBP9.96□□□□□ -0.81
TOP3A-203ENST00000469739 PRRT2Q7Z6L0 340 aaPredicted RBP9.96□□□□□ -0.81
TOP3A-203ENST00000469739 SESTD1Q86VW0 696 aa9.96□□□□□ -0.81
TOP3A-203ENST00000469739 CCDC13Q8IYE1 715 aa9.96□□□□□ -0.81
TOP3A-203ENST00000469739 C12orf29Q8N999 325 aa9.96□□□□□ -0.81
TOP3A-203ENST00000469739 ZNF483Q8TF39 744 aaPredicted RBP9.96□□□□□ -0.81
TOP3A-203ENST00000469739 CDT1Q9H211 546 aa9.96□□□□□ -0.81
TOP3A-203ENST00000469739 DNPEPQ9ULA0 475 aa9.96□□□□□ -0.81
TOP3A-203ENST00000469739 PPP2R3BQ9Y5P8 575 aa9.96□□□□□ -0.81
TOP3A-203ENST00000469739 ADGRA2Q96PE1 1338 aa9.96□□□□□ -0.81
TOP3A-203ENST00000469739 IGKV6D-21A0A0A0MT36 114 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 FAM187AA6NFU0 413 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 LACTBL1A8MY62 500 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 CYP1A1P04798 512 aaPredicted RBP9.96□□□□□ -0.82
TOP3A-203ENST00000469739 RFC5P40937 340 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 MTMR3Q13615 1198 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 NAA25Q14CX7 972 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 SNCBQ16143 134 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 SH3PXD2AQ5TCZ1 1133 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 IER5Q5VY09 327 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 JADE1Q6IE81 842 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 WDTC1Q8N5D0 677 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 ARMC2Q8NEN0 867 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 FEZF2Q8TBJ5 459 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 ZNF473Q8WTR7 871 aaKnown RBP9.96□□□□□ -0.82
TOP3A-203ENST00000469739 HSPH1Q92598 858 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 PAIP2Q9BPZ3 127 aaKnown RBP9.96□□□□□ -0.82
TOP3A-203ENST00000469739 TMEM121Q9BTD3 319 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 RPF1Q9H9Y2 349 aaKnown RBP9.96□□□□□ -0.82
TOP3A-203ENST00000469739 SLC40A1Q9NP59 571 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 IGSF5Q9NSI5 407 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 CYTH4Q9UIA0 394 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 ANAPC5Q9UJX4 755 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 AGTPBP1Q9UPW5 1226 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 PPFIA2O75334 1257 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 TNNC2P02585 160 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 CD48P09326 243 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 HOXC6P09630 235 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 STAG3L1P0CL83 205 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 ATF2P15336 505 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 CHN1P15882 459 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 ADORA2AP29274 412 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 AP1ARQ63HQ0 302 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 ENOSF1Q7L5Y1 443 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 CPLX4Q7Z7G2 160 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 KIAA0319LQ8IZA0 1049 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 KIRREL3Q8IZU9 778 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 GDAP1Q8TB36 358 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 MYCBPAPQ8TBZ2 947 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 NIF3L1Q9GZT8 377 aa9.96□□□□□ -0.82
TOP3A-203ENST00000469739 DIS3Q9Y2L1 958 aaKnown RBP9.96□□□□□ -0.82
TOP3A-203ENST00000469739 PDE4DIPQ5VU43 2346 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 F5H423 210 aaPredicted RBP9.95□□□□□ -0.82
TOP3A-203ENST00000469739 EDNRBP24530 442 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 POLR2BP30876 1174 aaKnown RBP9.95□□□□□ -0.82
TOP3A-203ENST00000469739 GCKP35557 465 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 SKOR1P84550 965 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 GAD2Q05329 585 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 ZNF252P-AS1Q0IIN9 211 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 GRM1Q13255 1194 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 P3H1Q32P28 736 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 DPP9Q86TI2 863 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 RHOT1Q8IXI2 618 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 NETO2Q8NC67 525 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 HEXIM2Q96MH2 286 aaKnown RBP9.95□□□□□ -0.82
TOP3A-203ENST00000469739 SYT17Q9BSW7 474 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 PLVAPQ9BX97 442 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 DCLK3Q9C098 648 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 SDCBP2Q9H190 292 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 SPATS2LQ9NUQ6 558 aaKnown RBP9.95□□□□□ -0.82
TOP3A-203ENST00000469739 FAM49BQ9NUQ9 324 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 PCYOX1Q9UHG3 505 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 AGAP1Q9UPQ3 857 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 SH3BP1Q9Y3L3 701 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 STYXL1Q9Y6J8 313 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 PODXLO00592 558 aa9.95□□□□□ -0.82
TOP3A-203ENST00000469739 RASGRF2O14827 1237 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms