RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 A0A087X1B8 175 aa6.76□□□□□ -1.33
XRN1-207ENST00000468894 PHGDHO43175 533 aaKnown RBP6.76□□□□□ -1.33
XRN1-207ENST00000468894 KITP10721 976 aa6.76□□□□□ -1.33
XRN1-207ENST00000468894 TYRP1P17643 537 aa6.76□□□□□ -1.33
XRN1-207ENST00000468894 NPTX2P47972 431 aa6.76□□□□□ -1.33
XRN1-207ENST00000468894 NDUFV1P49821 464 aa6.76□□□□□ -1.33
XRN1-207ENST00000468894 TGFB2P61812 414 aa6.76□□□□□ -1.33
XRN1-207ENST00000468894 CYB5RLQ6IPT4 315 aa6.76□□□□□ -1.33
XRN1-207ENST00000468894 Q6ZNX1 250 aa6.76□□□□□ -1.33
XRN1-207ENST00000468894 CHST15Q7LFX5 561 aaPredicted RBP6.76□□□□□ -1.33
XRN1-207ENST00000468894 FAM9AQ8IZU1 332 aaPredicted RBP6.76□□□□□ -1.33
XRN1-207ENST00000468894 IL31RAQ8NI17 732 aa6.76□□□□□ -1.33
XRN1-207ENST00000468894 LPIN2Q92539 896 aa6.76□□□□□ -1.33
XRN1-207ENST00000468894 AGAP2Q99490 1192 aa6.76□□□□□ -1.33
XRN1-207ENST00000468894 AIFM2Q9BRQ8 373 aa6.76□□□□□ -1.33
XRN1-207ENST00000468894 TOR3AQ9H497 397 aa6.76□□□□□ -1.33
XRN1-207ENST00000468894 PIH1D1Q9NWS0 290 aaKnown RBP6.76□□□□□ -1.33
XRN1-207ENST00000468894 PACSIN3Q9UKS6 424 aa6.76□□□□□ -1.33
XRN1-207ENST00000468894 PLEKHM1Q9Y4G2 1056 aa6.76□□□□□ -1.33
XRN1-207ENST00000468894 TPP1O14773 563 aa6.75□□□□□ -1.33
XRN1-207ENST00000468894 DCLK1O15075 740 aa6.75□□□□□ -1.33
XRN1-207ENST00000468894 GRPP07492 148 aa6.75□□□□□ -1.33
XRN1-207ENST00000468894 SRGNP10124 158 aa6.75□□□□□ -1.33
XRN1-207ENST00000468894 PPP3CBP16298 524 aa6.75□□□□□ -1.33
XRN1-207ENST00000468894 ADRA1BP35368 520 aa6.75□□□□□ -1.33
XRN1-207ENST00000468894 MPLP40238 635 aa6.75□□□□□ -1.33
XRN1-207ENST00000468894 HMGA2P52926 109 aa6.75□□□□□ -1.33
XRN1-207ENST00000468894 MPP3Q13368 585 aa6.75□□□□□ -1.33
XRN1-207ENST00000468894 APOA5Q6Q788 366 aa6.75□□□□□ -1.33
XRN1-207ENST00000468894 FAM156AQ8NDB6 213 aa6.75□□□□□ -1.33
XRN1-207ENST00000468894 SLC30A5Q8TAD4 765 aa6.75□□□□□ -1.33
XRN1-207ENST00000468894 KBTBD7Q8WVZ9 684 aa6.75□□□□□ -1.33
XRN1-207ENST00000468894 CAVIN3Q969G5 261 aa6.75□□□□□ -1.33
XRN1-207ENST00000468894 SPATA5L1Q9BVQ7 753 aa6.75□□□□□ -1.33
XRN1-207ENST00000468894 DPH1Q9BZG8 443 aa6.75□□□□□ -1.33
XRN1-207ENST00000468894 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.75□□□□□ -1.33
XRN1-207ENST00000468894 SPATA31A3Q5VYP0 1347 aa6.75□□□□□ -1.33
XRN1-207ENST00000468894 FRMPD2Q68DX3 1309 aaPredicted RBP6.75□□□□□ -1.33
XRN1-207ENST00000468894 WDR33Q9C0J8 1336 aaKnown RBP6.75□□□□□ -1.33
XRN1-207ENST00000468894 A0A0B4J269 797 aa6.74□□□□□ -1.33
XRN1-207ENST00000468894 PROM1O43490 865 aa6.74□□□□□ -1.33
XRN1-207ENST00000468894 ESRRBO95718 433 aa6.74□□□□□ -1.33
XRN1-207ENST00000468894 ZBED1O96006 694 aa6.74□□□□□ -1.33
XRN1-207ENST00000468894 GCLCP48506 637 aaPredicted RBP6.74□□□□□ -1.33
XRN1-207ENST00000468894 ZNF134P52741 427 aa6.74□□□□□ -1.33
XRN1-207ENST00000468894 TUBB3Q13509 450 aa6.74□□□□□ -1.33
XRN1-207ENST00000468894 VWA1Q6PCB0 445 aa6.74□□□□□ -1.33
XRN1-207ENST00000468894 MYCBPAPQ8TBZ2 947 aa6.74□□□□□ -1.33
XRN1-207ENST00000468894 ANKS1AQ92625 1134 aa6.74□□□□□ -1.33
XRN1-207ENST00000468894 SLC46A1Q96NT5 459 aa6.74□□□□□ -1.33
XRN1-207ENST00000468894 HEPHQ9BQS7 1158 aa6.74□□□□□ -1.33
XRN1-207ENST00000468894 KRTAP4-5Q9BYR2 181 aa6.74□□□□□ -1.33
XRN1-207ENST00000468894 PRDM11Q9NQV5 511 aa6.74□□□□□ -1.33
XRN1-207ENST00000468894 RAD54BQ9Y620 910 aa6.74□□□□□ -1.33
XRN1-207ENST00000468894 SALL3Q9BXA9 1300 aa6.74□□□□□ -1.33
XRN1-207ENST00000468894 MYO1FO00160 1098 aa6.73□□□□□ -1.33
XRN1-207ENST00000468894 TBX3O15119 743 aa6.73□□□□□ -1.33
XRN1-207ENST00000468894 SOAT2O75908 522 aa6.73□□□□□ -1.33
XRN1-207ENST00000468894 HRGP04196 525 aa6.73□□□□□ -1.33
XRN1-207ENST00000468894 EN2P19622 333 aaPredicted RBP6.73□□□□□ -1.33
XRN1-207ENST00000468894 ITGALP20701 1170 aa6.73□□□□□ -1.33
XRN1-207ENST00000468894 SLC11A2P49281 568 aa6.73□□□□□ -1.33
XRN1-207ENST00000468894 HNRNPMP52272 730 aaKnown RBP eCLIP6.73□□□□□ -1.33
XRN1-207ENST00000468894 RBM20Q5T481 1227 aaKnown RBP6.73□□□□□ -1.33
XRN1-207ENST00000468894 SRGAP1Q7Z6B7 1085 aa6.73□□□□□ -1.33
XRN1-207ENST00000468894 FAM109AQ8N4B1 249 aa6.73□□□□□ -1.33
XRN1-207ENST00000468894 GPR150Q8NGU9 434 aa6.73□□□□□ -1.33
XRN1-207ENST00000468894 MAML1Q92585 1016 aa6.73□□□□□ -1.33
XRN1-207ENST00000468894 TIFAQ96CG3 184 aa6.73□□□□□ -1.33
XRN1-207ENST00000468894 OSBPL9Q96SU4 736 aa6.73□□□□□ -1.33
XRN1-207ENST00000468894 TTYH3Q9C0H2 523 aa6.73□□□□□ -1.33
XRN1-207ENST00000468894 BHMT2Q9H2M3 363 aa6.73□□□□□ -1.33
XRN1-207ENST00000468894 DMTF1Q9Y222 760 aa6.73□□□□□ -1.33
XRN1-207ENST00000468894 USP19O94966 1318 aa6.73□□□□□ -1.33
XRN1-207ENST00000468894 A0A087WWL8 130 aa6.72□□□□□ -1.33
XRN1-207ENST00000468894 CFAP69A5D8W1 941 aa6.72□□□□□ -1.33
XRN1-207ENST00000468894 F5H697 171 aa6.72□□□□□ -1.33
XRN1-207ENST00000468894 FRS3O43559 492 aa6.72□□□□□ -1.33
XRN1-207ENST00000468894 SLC7A1P30825 629 aa6.72□□□□□ -1.33
XRN1-207ENST00000468894 VIPR2P41587 438 aa6.72□□□□□ -1.33
XRN1-207ENST00000468894 UCP3P55916 312 aa6.72□□□□□ -1.33
XRN1-207ENST00000468894 LONRF3Q496Y0 759 aa6.72□□□□□ -1.33
XRN1-207ENST00000468894 ZNF783Q6ZMS7 281 aa6.72□□□□□ -1.33
XRN1-207ENST00000468894 TSHZ1Q6ZSZ6 1077 aa6.72□□□□□ -1.33
XRN1-207ENST00000468894 CCDC149Q6ZUS6 474 aa6.72□□□□□ -1.33
XRN1-207ENST00000468894 DGKHQ86XP1 1220 aa6.72□□□□□ -1.33
XRN1-207ENST00000468894 SMURF2Q9HAU4 748 aa6.72□□□□□ -1.33
XRN1-207ENST00000468894 XPR1Q9UBH6 696 aa6.72□□□□□ -1.33
XRN1-207ENST00000468894 BTN3A1O00481 513 aa6.71□□□□□ -1.34
XRN1-207ENST00000468894 YY2O15391 372 aa6.71□□□□□ -1.34
XRN1-207ENST00000468894 PEX1O43933 1283 aa6.71□□□□□ -1.34
XRN1-207ENST00000468894 RHOBTB3O94955 611 aa6.71□□□□□ -1.34
XRN1-207ENST00000468894 RHCEP18577 417 aa6.71□□□□□ -1.34
XRN1-207ENST00000468894 PLA2G5P39877 138 aa6.71□□□□□ -1.34
XRN1-207ENST00000468894 CACNB3P54284 484 aa6.71□□□□□ -1.34
XRN1-207ENST00000468894 RHDQ02161 417 aa6.71□□□□□ -1.34
XRN1-207ENST00000468894 VPS53Q5VIR6 699 aa6.71□□□□□ -1.34
XRN1-207ENST00000468894 RNF220Q5VTB9 566 aa6.71□□□□□ -1.34
XRN1-207ENST00000468894 KIAA0895LQ68EN5 471 aa6.71□□□□□ -1.34
XRN1-207ENST00000468894 TMEM108Q6UXF1 575 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms