RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 DEPDC1BQ8WUY9 529 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 LEO1Q8WVC0 666 aaPredicted RBP20.52■□□□□ 0.88
COL7A1-207ENST00000467985 SPATA32Q96LK8 384 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 ZSWIM3Q96MP5 696 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 PHOX2BQ99453 314 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 ACBD6Q9BR61 282 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 TRMT61BQ9BVS5 477 aaKnown RBP20.52■□□□□ 0.88
COL7A1-207ENST00000467985 OSBPL6Q9BZF3 934 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 PLA2G2FQ9BZM2 168 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 SIX4Q9UIU6 781 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 L1RE1Q9UN81 338 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 PCDHB5Q9Y5E4 795 aa20.52■□□□□ 0.88
COL7A1-207ENST00000467985 A0A1W2PRU2 124 aa20.51■□□□□ 0.87
COL7A1-207ENST00000467985 PROB1E7EW31 1015 aa20.51■□□□□ 0.87
COL7A1-207ENST00000467985 PRPF40AO75400 957 aaKnown RBP20.51■□□□□ 0.87
COL7A1-207ENST00000467985 MYL1P05976 194 aa20.51■□□□□ 0.87
COL7A1-207ENST00000467985 HAPLN1P10915 354 aaPredicted RBP20.51■□□□□ 0.87
COL7A1-207ENST00000467985 PSMC3P17980 439 aa20.51■□□□□ 0.87
COL7A1-207ENST00000467985 LHX1P48742 406 aa20.51■□□□□ 0.87
COL7A1-207ENST00000467985 ANGPT1Q15389 498 aa20.51■□□□□ 0.87
COL7A1-207ENST00000467985 TAF12Q16514 161 aa20.51■□□□□ 0.87
COL7A1-207ENST00000467985 ARHGAP15Q53QZ3 475 aa20.51■□□□□ 0.87
COL7A1-207ENST00000467985 DPH6Q7L8W6 267 aa20.51■□□□□ 0.87
COL7A1-207ENST00000467985 LRRTM3Q86VH5 581 aa20.51■□□□□ 0.87
COL7A1-207ENST00000467985 XXYLT1Q8NBI6 393 aa20.51■□□□□ 0.87
COL7A1-207ENST00000467985 GOLGA5Q8TBA6 731 aa20.51■□□□□ 0.87
COL7A1-207ENST00000467985 IRF7Q92985 503 aa20.51■□□□□ 0.87
COL7A1-207ENST00000467985 NELL2Q99435 816 aa20.51■□□□□ 0.87
COL7A1-207ENST00000467985 BRD9Q9H8M2 597 aa20.51■□□□□ 0.87
COL7A1-207ENST00000467985 SLC39A2Q9NP94 309 aa20.51■□□□□ 0.87
COL7A1-207ENST00000467985 SNX9Q9Y5X1 595 aa20.51■□□□□ 0.87
COL7A1-207ENST00000467985 FRYLO94915 3013 aa20.5■□□□□ 0.87
COL7A1-207ENST00000467985 NRG2O14511 850 aaPredicted RBP20.5■□□□□ 0.87
COL7A1-207ENST00000467985 ACTN4O43707 911 aaKnown RBP20.5■□□□□ 0.87
COL7A1-207ENST00000467985 SOAT2O75908 522 aa20.5■□□□□ 0.87
COL7A1-207ENST00000467985 GJA1P17302 382 aa20.5■□□□□ 0.87
COL7A1-207ENST00000467985 PCSK1P29120 753 aa20.5■□□□□ 0.87
COL7A1-207ENST00000467985 CASP1P29466 404 aa20.5■□□□□ 0.87
COL7A1-207ENST00000467985 NBL1P41271 181 aa20.5■□□□□ 0.87
COL7A1-207ENST00000467985 PSMD2Q13200 908 aa20.5■□□□□ 0.87
COL7A1-207ENST00000467985 KNOP1Q1ED39 458 aaKnown RBP20.5■□□□□ 0.87
COL7A1-207ENST00000467985 MFSD6LQ8IWD5 586 aa20.5■□□□□ 0.87
COL7A1-207ENST00000467985 NELFCDQ8IXH7 590 aa20.5■□□□□ 0.87
COL7A1-207ENST00000467985 C12orf56Q8IXR9 622 aa20.5■□□□□ 0.87
COL7A1-207ENST00000467985 OR5B17Q8NGF7 314 aa20.5■□□□□ 0.87
COL7A1-207ENST00000467985 HPDLQ96IR7 371 aa20.5■□□□□ 0.87
COL7A1-207ENST00000467985 FNBP1Q96RU3 617 aa20.5■□□□□ 0.87
COL7A1-207ENST00000467985 FOXQ1Q9C009 403 aa20.5■□□□□ 0.87
COL7A1-207ENST00000467985 ABCB6Q9NP58 842 aa20.5■□□□□ 0.87
COL7A1-207ENST00000467985 TRPV5Q9NQA5 729 aa20.5■□□□□ 0.87
COL7A1-207ENST00000467985 DDX43Q9NXZ2 648 aaKnown RBP20.5■□□□□ 0.87
COL7A1-207ENST00000467985 ABI2Q9NYB9 513 aaPredicted RBP20.5■□□□□ 0.87
COL7A1-207ENST00000467985 DLGAP2Q9P1A6 1054 aa20.5■□□□□ 0.87
COL7A1-207ENST00000467985 SERTAD1Q9UHV2 236 aa20.5■□□□□ 0.87
COL7A1-207ENST00000467985 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.49■□□□□ 0.87
COL7A1-207ENST00000467985 DCNP07585 359 aaKnown RBP20.49■□□□□ 0.87
COL7A1-207ENST00000467985 PFKFB1P16118 471 aa20.49■□□□□ 0.87
COL7A1-207ENST00000467985 CDC25CP30307 473 aa20.49■□□□□ 0.87
COL7A1-207ENST00000467985 MAGEA9P43362 315 aa20.49■□□□□ 0.87
COL7A1-207ENST00000467985 CYP2J2P51589 502 aa20.49■□□□□ 0.87
COL7A1-207ENST00000467985 GRM2Q14416 872 aa20.49■□□□□ 0.87
COL7A1-207ENST00000467985 PSMD6Q15008 389 aa20.49■□□□□ 0.87
COL7A1-207ENST00000467985 LMBRD2Q68DH5 695 aaPredicted RBP20.49■□□□□ 0.87
COL7A1-207ENST00000467985 GAREM2Q75VX8 874 aa20.49■□□□□ 0.87
COL7A1-207ENST00000467985 GRAMD1CQ8IYS0 662 aa20.49■□□□□ 0.87
COL7A1-207ENST00000467985 ADGRF2Q8IZF7 708 aa20.49■□□□□ 0.87
COL7A1-207ENST00000467985 PAGE5Q96GU1 130 aa20.49■□□□□ 0.87
COL7A1-207ENST00000467985 GCNAQ96QF7 691 aa20.49■□□□□ 0.87
COL7A1-207ENST00000467985 SCAND2PQ9GZW5 306 aaPredicted RBP20.49■□□□□ 0.87
COL7A1-207ENST00000467985 ATXN3LQ9H3M9 355 aa20.49■□□□□ 0.87
COL7A1-207ENST00000467985 EXOC1Q9NV70 894 aa20.49■□□□□ 0.87
COL7A1-207ENST00000467985 ZMYM5Q9UJ78 669 aa20.49■□□□□ 0.87
COL7A1-207ENST00000467985 MRPS17Q9Y2R5 130 aaKnown RBP20.49■□□□□ 0.87
COL7A1-207ENST00000467985 ZDHHC9Q9Y397 364 aa20.49■□□□□ 0.87
COL7A1-207ENST00000467985 PTPRJQ12913 1337 aa20.49■□□□□ 0.87
COL7A1-207ENST00000467985 CFAP54Q96N23 3096 aa20.48■□□□□ 0.87
COL7A1-207ENST00000467985 A0A1B0GVL5 298 aa20.48■□□□□ 0.87
COL7A1-207ENST00000467985 CLIC2O15247 247 aa20.48■□□□□ 0.87
COL7A1-207ENST00000467985 DLATP10515 647 aaKnown RBP20.48■□□□□ 0.87
COL7A1-207ENST00000467985 ATF6P18850 670 aa20.48■□□□□ 0.87
COL7A1-207ENST00000467985 GABRR2P28476 465 aa20.48■□□□□ 0.87
COL7A1-207ENST00000467985 WEE1P30291 646 aa20.48■□□□□ 0.87
COL7A1-207ENST00000467985 VIPR2P41587 438 aa20.48■□□□□ 0.87
COL7A1-207ENST00000467985 CYP24A1Q07973 514 aa20.48■□□□□ 0.87
COL7A1-207ENST00000467985 UBXN2BQ14CS0 331 aa20.48■□□□□ 0.87
COL7A1-207ENST00000467985 INTS6LQ5JSJ4 861 aaKnown RBP20.48■□□□□ 0.87
COL7A1-207ENST00000467985 VITQ6UXI7 678 aa20.48■□□□□ 0.87
COL7A1-207ENST00000467985 ZNF852Q6ZMS4 543 aa20.48■□□□□ 0.87
COL7A1-207ENST00000467985 TRAPPC11Q7Z392 1133 aa20.48■□□□□ 0.87
COL7A1-207ENST00000467985 RDH13Q8NBN7 331 aa20.48■□□□□ 0.87
COL7A1-207ENST00000467985 FAM84AQ96KN4 292 aa20.48■□□□□ 0.87
COL7A1-207ENST00000467985 CGRRF1Q99675 332 aa20.48■□□□□ 0.87
COL7A1-207ENST00000467985 LPIN3Q9BQK8 851 aa20.48■□□□□ 0.87
COL7A1-207ENST00000467985 BCO2Q9BYV7 579 aa20.48■□□□□ 0.87
COL7A1-207ENST00000467985 ZNF334Q9HCZ1 680 aaPredicted RBP20.48■□□□□ 0.87
COL7A1-207ENST00000467985 HPSEQ9Y251 543 aa20.48■□□□□ 0.87
COL7A1-207ENST00000467985 MIA3Q5JRA6 1907 aa20.48■□□□□ 0.87
COL7A1-207ENST00000467985 FAM170BA6NMN3 283 aa20.47■□□□□ 0.87
COL7A1-207ENST00000467985 MAN2B1O00754 1011 aa20.47■□□□□ 0.87
COL7A1-207ENST00000467985 GABRDO14764 452 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms