RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, human

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-216	ENST00000467134	CLTB	P09497	229 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	BRD2	P25440	801 aa	Known RBP	11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	RAP1GAP	P47736	663 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	LHX1	P48742	406 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	CDH8	P55286	799 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	SNX16	P57768	344 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	NAA35	Q5VZE5	725 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	PLEKHA7	Q6IQ23	1121 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	CNKSR3	Q6P9H4	555 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	DCLRE1A	Q6PJP8	1040 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	ADGRF2	Q8IZF7	708 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	MYRIP	Q8NFW9	859 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	SLC35G2	Q8TBE7	412 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	TFAP2B	Q92481	460 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	ZNF653	Q96CK0	615 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	CYFIP2	Q96F07	1278 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	TWNK	Q96RR1	684 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	ZSWIM1	Q9BR11	485 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	MRPL45	Q9BRJ2	306 aa	Known RBP	11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	MRPL9	Q9BYD2	267 aa	Known RBP	11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	WNT8A	Q9H1J5	351 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	MIOS	Q9NXC5	875 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	SNX12	Q9UMY4	172 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	L1RE1	Q9UN81	338 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	TFR2	Q9UP52	801 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	STXBP5L	Q9Y2K9	1186 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	TET1	Q8NFU7	2136 aa		11.69	□□□□□ -0.54
MUC1-216	ENST00000467134	PTPRD	P23468	1912 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	MIF4GD	A9UHW6	222 aa	Known RBP	11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	URI1	O94763	535 aa	Predicted RBP	11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	KIF4A	O95239	1232 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	ODC1	P11926	461 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	CD19	P15391	556 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	TYMP	P19971	482 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	SCNN1A	P37088	669 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	NOP2	P46087	812 aa	Known RBP	11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	GABRB2	P47870	512 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	ITIH3	Q06033	890 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	PKDCC	Q504Y2	493 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	CLLU1OS	Q5K130	101 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	MEI1	Q5TIA1	1274 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	UBE2Q1	Q7Z7E8	422 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	PDCL2	Q8N4E4	241 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	ARHGEF26	Q96DR7	871 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	RPGRIP1	Q96KN7	1286 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	SUSD3	Q96L08	255 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	SENP8	Q96LD8	212 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	TMEM175	Q9BSA9	504 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	SNX25	Q9H3E2	840 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	GOLGA2P5	Q9HBQ8	144 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	PARVA	Q9NVD7	372 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	ADAM22	Q9P0K1	906 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	CNOT8	Q9UFF9	292 aa	Known RBP	11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	HMGXB4	Q9UGU5	601 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	PUF60	Q9UHX1	559 aa	Known RBP	11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	HYOU1	Q9Y4L1	999 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	SAR1B	Q9Y6B6	198 aa		11.68	□□□□□ -0.54
MUC1-216	ENST00000467134	ALPK3	Q96L96	1907 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	TCRBV5S1A1T	A0A578	114 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	TMCO5B	A8MYB1	307 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	CYB561D2	O14569	222 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	RIOK3	O14730	519 aa	Known RBP	11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	BUB1	O43683	1085 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	PALM	O75781	387 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	MICAL2	O94851	1124 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	ATP1A1	P05023	1023 aa	Known RBP	11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	ABCB4	P21439	1286 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	PCSK1	P29120	753 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	MAN1A1	P33908	653 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	GNL1	P36915	607 aa	Predicted RBP	11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	SLC1A1	P43005	524 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	RPL34	P49207	117 aa	Known RBP	11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	CLCNKB	P51801	687 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	ATN1	P54259	1190 aa	Predicted RBP	11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	NAP1L1	P55209	391 aa	Known RBP	11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	CKAP4	Q07065	602 aa	Known RBP	11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	CLUL1	Q15846	466 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	ZNF394	Q53GI3	561 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	ZNF572	Q7Z3I7	529 aa	Predicted RBP	11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	WDTC1	Q8N5D0	677 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	CEP112	Q8N8E3	955 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	C3orf20	Q8ND61	904 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	DIS3L	Q8TF46	1054 aa	Known RBP	11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	TLR10	Q9BXR5	811 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	TMEM39A	Q9NV64	488 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	CTTNBP2NL	Q9P2B4	639 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	PCDHB7	Q9Y5E2	793 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	COL4A6	Q14031	1691 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134	NLRC5	Q86WI3	1866 aa		11.67	□□□□□ -0.54
MUC1-216	ENST00000467134		A8MXQ7	604 aa		11.66	□□□□□ -0.54
MUC1-216	ENST00000467134	BUB1B	O60566	1050 aa	Predicted RBP	11.66	□□□□□ -0.54
MUC1-216	ENST00000467134	SLU7	O95391	586 aa	Known RBP	11.66	□□□□□ -0.54
MUC1-216	ENST00000467134	TIMP1	P01033	207 aa		11.66	□□□□□ -0.54
MUC1-216	ENST00000467134	MYC	P01106	439 aa	Predicted RBP	11.66	□□□□□ -0.54
MUC1-216	ENST00000467134	GPD2	P43304	727 aa		11.66	□□□□□ -0.54
MUC1-216	ENST00000467134	BCAT1	P54687	386 aa		11.66	□□□□□ -0.54
MUC1-216	ENST00000467134	IKBKE	Q14164	716 aa		11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms