RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 ECT2Q9H8V3 914 aa10.05□□□□□ -0.8
ABCF3-205ENST00000466416 TDP1Q9NUW8 608 aa10.05□□□□□ -0.8
ABCF3-205ENST00000466416 CNTN3Q9P232 1028 aa10.05□□□□□ -0.8
ABCF3-205ENST00000466416 APOBEC2Q9Y235 224 aaKnown RBP10.05□□□□□ -0.8
ABCF3-205ENST00000466416 ARID2Q68CP9 1835 aa10.05□□□□□ -0.8
ABCF3-205ENST00000466416 NUP210Q8TEM1 1887 aaPredicted RBP10.04□□□□□ -0.8
ABCF3-205ENST00000466416 A0A087WV48 116 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 MTMR11A4FU01 709 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 FTH1P19P0C7X4 201 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 PLA2G2AP14555 144 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 U2AF2P26368 475 aaKnown RBP eCLIP10.04□□□□□ -0.8
ABCF3-205ENST00000466416 PDIA3P30101 505 aaKnown RBP10.04□□□□□ -0.8
ABCF3-205ENST00000466416 PTGER3P43115 390 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 CCT2P78371 535 aaKnown RBP10.04□□□□□ -0.8
ABCF3-205ENST00000466416 NR1H3Q13133 447 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 ZNF268Q14587 947 aaPredicted RBP10.04□□□□□ -0.8
ABCF3-205ENST00000466416 TAF12Q16514 161 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 CRY1Q16526 586 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 ARMCX5Q6P1M9 558 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 SCUBE3Q8IX30 993 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 TMEFF1Q8IYR6 380 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 MINDY1Q8N5J2 469 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 MDGA1Q8NFP4 955 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 BSNDQ8WZ55 320 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 C18orf25Q96B23 403 aaPredicted RBP10.04□□□□□ -0.8
ABCF3-205ENST00000466416 IFT74Q96LB3 600 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 FNBP1Q96RU3 617 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 AGXT2Q9BYV1 514 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 IL21Q9HBE4 155 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 CAPN10Q9HC96 672 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 DNAAF2Q9NVR5 837 aaKnown RBP10.04□□□□□ -0.8
ABCF3-205ENST00000466416 MMP17Q9ULZ9 603 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.04□□□□□ -0.8
ABCF3-205ENST00000466416 TRIP11Q15643 1979 aa10.04□□□□□ -0.8
ABCF3-205ENST00000466416 KIF26AQ9ULI4 1882 aaPredicted RBP10.04□□□□□ -0.8
ABCF3-205ENST00000466416 A0A087WWV3 80 aa10.03□□□□□ -0.8
ABCF3-205ENST00000466416 CYSRT1A8MQ03 144 aa10.03□□□□□ -0.8
ABCF3-205ENST00000466416 K7ERI5 159 aa10.03□□□□□ -0.8
ABCF3-205ENST00000466416 ARHGAP33O14559 1287 aa10.03□□□□□ -0.8
ABCF3-205ENST00000466416 C1QL1O75973 258 aa10.03□□□□□ -0.8
ABCF3-205ENST00000466416 PRB1P04280 392 aa10.03□□□□□ -0.8
ABCF3-205ENST00000466416 SYPP08247 313 aa10.03□□□□□ -0.8
ABCF3-205ENST00000466416 CYP11B2P19099 503 aa10.03□□□□□ -0.8
ABCF3-205ENST00000466416 ITPKAP23677 461 aa10.03□□□□□ -0.8
ABCF3-205ENST00000466416 EVCP57679 992 aa10.03□□□□□ -0.8
ABCF3-205ENST00000466416 OSTNP61366 133 aa10.03□□□□□ -0.8
ABCF3-205ENST00000466416 NAIF1Q69YI7 327 aaPredicted RBP10.03□□□□□ -0.8
ABCF3-205ENST00000466416 ARMCX6Q7L4S7 300 aa10.03□□□□□ -0.8
ABCF3-205ENST00000466416 MAB21L3Q8N8X9 362 aa10.03□□□□□ -0.8
ABCF3-205ENST00000466416 CEP120Q8N960 986 aa10.03□□□□□ -0.8
ABCF3-205ENST00000466416 WHAMMQ8TF30 809 aa10.03□□□□□ -0.8
ABCF3-205ENST00000466416 ATP2A3Q93084 1043 aa10.03□□□□□ -0.8
ABCF3-205ENST00000466416 ACO2Q99798 780 aaKnown RBP10.03□□□□□ -0.8
ABCF3-205ENST00000466416 CDT1Q9H211 546 aa10.03□□□□□ -0.8
ABCF3-205ENST00000466416 NCOA5Q9HCD5 579 aaKnown RBP10.03□□□□□ -0.8
ABCF3-205ENST00000466416 PTPRHQ9HD43 1115 aa10.03□□□□□ -0.8
ABCF3-205ENST00000466416 POLMQ9NP87 494 aaPredicted RBP10.03□□□□□ -0.8
ABCF3-205ENST00000466416 KIAA1522Q9P206 1035 aaPredicted RBP10.03□□□□□ -0.8
ABCF3-205ENST00000466416 CCL26Q9Y258 94 aa10.03□□□□□ -0.8
ABCF3-205ENST00000466416 TIMM13Q9Y5L4 95 aaPredicted RBP10.03□□□□□ -0.8
ABCF3-205ENST00000466416 RAI2Q9Y5P3 530 aa10.03□□□□□ -0.8
ABCF3-205ENST00000466416 CPLX1O14810 134 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 ATXN7O15265 892 aaPredicted RBP10.02□□□□□ -0.81
ABCF3-205ENST00000466416 AP5Z1O43299 807 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 SH3BP5O60239 455 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 SOAT2O75908 522 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 LARGE1O95461 756 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 MCF2P10911 925 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 CPA1P15085 419 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 TYMPP19971 482 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 HSPA4P34932 840 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 AARSP49588 968 aaKnown RBP eCLIP10.02□□□□□ -0.81
ABCF3-205ENST00000466416 MRPS21P82921 87 aaKnown RBP10.02□□□□□ -0.81
ABCF3-205ENST00000466416 NBR1Q14596 966 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 ZNF568Q3ZCX4 644 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 HSF5Q4G112 596 aaPredicted RBP10.02□□□□□ -0.81
ABCF3-205ENST00000466416 C2orf27AQ580R0 203 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 OVOS1Q6IE37 1185 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 BLOC1S2Q6QNY1 142 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 PADI6Q6TGC4 694 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 PIK3AP1Q6ZUJ8 805 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 TOGARAM2Q6ZUX3 1019 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 MON1AQ86VX9 555 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 TTC30AQ86WT1 665 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 PNPLA1Q8N8W4 532 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 OSCP1Q8WVF1 389 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 RLN3Q8WXF3 142 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 LPIN3Q9BQK8 851 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 TTC12Q9H892 705 aaPredicted RBP10.02□□□□□ -0.81
ABCF3-205ENST00000466416 TUFT1Q9NNX1 390 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 DUS2Q9NX74 493 aaKnown RBP10.02□□□□□ -0.81
ABCF3-205ENST00000466416 CIZ1Q9ULV3 898 aaPredicted RBP10.02□□□□□ -0.81
ABCF3-205ENST00000466416 KCNJ14Q9UNX9 436 aa10.02□□□□□ -0.81
ABCF3-205ENST00000466416 CAPN8A6NHC0 703 aa10.01□□□□□ -0.81
ABCF3-205ENST00000466416 K7EQS6 105 aa10.01□□□□□ -0.81
ABCF3-205ENST00000466416 F11P03951 625 aa10.01□□□□□ -0.81
ABCF3-205ENST00000466416 SPATA31C1P0DKV0 1188 aa10.01□□□□□ -0.81
ABCF3-205ENST00000466416 XBP1P17861 261 aa10.01□□□□□ -0.81
ABCF3-205ENST00000466416 PAX3P23760 479 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms