RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 DNTTIP2Q5QJE6 756 aaKnown RBP12.9□□□□□ -0.34
VPS16-206ENST00000466415 NAA35Q5VZE5 725 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 ACOT1Q86TX2 421 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 OSTM1Q86WC4 334 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 CRIPAKQ8N1N5 446 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 TMEM35BQ8NCS4 154 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 MSANTD4Q8NCY6 345 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 SUSD3Q96L08 255 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 C16orf45Q96MC5 204 aaPredicted RBP12.9□□□□□ -0.34
VPS16-206ENST00000466415 PCDHB18PQ96TA0 734 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 YME1L1Q96TA2 773 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 DDX43Q9NXZ2 648 aaKnown RBP12.9□□□□□ -0.34
VPS16-206ENST00000466415 INTUQ9ULD6 942 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 GUCA1BQ9UMX6 200 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 PCDHB8Q9UN66 801 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 PCDHGC3Q9UN70 934 aa12.9□□□□□ -0.34
VPS16-206ENST00000466415 KIAA0100Q14667 2235 aaKnown RBP12.9□□□□□ -0.34
VPS16-206ENST00000466415 SCN1AP35498 2009 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 TET1Q8NFU7 2136 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 FAM170AA1A519 330 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 M0QZQ0 153 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 KIF2AO00139 706 aaPredicted RBP12.89□□□□□ -0.35
VPS16-206ENST00000466415 TYMPP19971 482 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 ABCB4P21439 1286 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 PCSK1P29120 753 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 SLC11A1P49279 550 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 ELAVL2Q12926 359 aaKnown RBP12.89□□□□□ -0.35
VPS16-206ENST00000466415 BTG3Q14201 252 aaPredicted RBP12.89□□□□□ -0.35
VPS16-206ENST00000466415 GOLGA7BQ2TAP0 167 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 ACAD10Q6JQN1 1059 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 ZNF662Q6ZS27 426 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 ZNF365Q70YC5 407 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 LIMS2Q7Z4I7 341 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 PALB2Q86YC2 1186 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 CMTR2Q8IYT2 770 aaKnown RBP12.89□□□□□ -0.35
VPS16-206ENST00000466415 THEM5Q8N1Q8 247 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 OLIG1Q8TAK6 271 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 TFAP2BQ92481 460 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 SECISBP2LQ93073 1101 aaKnown RBP12.89□□□□□ -0.35
VPS16-206ENST00000466415 TRIM11Q96F44 468 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 NOX5Q96PH1 765 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 SYT15Q9BQS2 421 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 PACSIN1Q9BY11 444 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 DPEP3Q9H4B8 488 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 FAM49BQ9NUQ9 324 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 TAS2R14Q9NYV8 317 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 PCDH10Q9P2E7 1040 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 HESX1Q9UBX0 185 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 ADAM28Q9UKQ2 775 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 NENFQ9UMX5 172 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 STXBP5LQ9Y2K9 1186 aa12.89□□□□□ -0.35
VPS16-206ENST00000466415 TIMM13Q9Y5L4 95 aaPredicted RBP12.89□□□□□ -0.35
VPS16-206ENST00000466415 SF3B1O75533 1304 aaKnown RBP eCLIP12.88□□□□□ -0.35
VPS16-206ENST00000466415 TTC3P53804 2025 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 A0A0U1RQJ8 604 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 MACROD2A1Z1Q3 448 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 CARNS1A5YM72 827 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 ANKRD62A6NC57 917 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 F8W810 466 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 PJA2O43164 708 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 MICAL2O94851 1124 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 FTLP02792 175 aaPredicted RBP12.88□□□□□ -0.35
VPS16-206ENST00000466415 CYP1A1P04798 512 aaPredicted RBP12.88□□□□□ -0.35
VPS16-206ENST00000466415 CYP11A1P05108 521 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 ITGB1P05556 798 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 TMEM253P0C7T8 217 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 IGFBP6P24592 240 aaPredicted RBP12.88□□□□□ -0.35
VPS16-206ENST00000466415 ACAT1P24752 427 aaKnown RBP12.88□□□□□ -0.35
VPS16-206ENST00000466415 ALDH7A1P49419 539 aaKnown RBP12.88□□□□□ -0.35
VPS16-206ENST00000466415 GALCP54803 685 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 BCAR1P56945 870 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 PSMC1P62191 440 aaKnown RBP12.88□□□□□ -0.35
VPS16-206ENST00000466415 NOMO3P69849 1222 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 TSPY1Q01534 308 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 CENPCQ03188 943 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 YWHAHQ04917 246 aaPredicted RBP12.88□□□□□ -0.35
VPS16-206ENST00000466415 IFI16Q16666 785 aaKnown RBP12.88□□□□□ -0.35
VPS16-206ENST00000466415 COL13A1Q5TAT6 717 aaPredicted RBP12.88□□□□□ -0.35
VPS16-206ENST00000466415 LIN9Q5TKA1 542 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 OVOS1Q6IE37 1185 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 B3GALNT2Q8NCR0 500 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 C1orf131Q8NDD1 294 aaKnown RBP12.88□□□□□ -0.35
VPS16-206ENST00000466415 ATRIPQ8WXE1 791 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 CPA5Q8WXQ8 436 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 ZNF653Q96CK0 615 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 CYFIP2Q96F07 1278 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 ALS2CR12Q96Q35 445 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 ZBED2Q9BTP6 218 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 ZNF518BQ9C0D4 1074 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 ISCUQ9H1K1 167 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 HCSTQ9UBK5 93 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 TSPAN16Q9UKR8 245 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 CDH9Q9ULB4 789 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.88□□□□□ -0.35
VPS16-206ENST00000466415 TFR2Q9UP52 801 aa12.88□□□□□ -0.35
VPS16-206ENST00000466415 RCCD1A6NED2 376 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 O00370 1275 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 GABRDO14764 452 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 SYN3O14994 580 aa12.87□□□□□ -0.35
VPS16-206ENST00000466415 HCRTO43612 131 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms