RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 FAM193AP78312 1265 aa9.04□□□□□ -0.96
LSG1-206ENST00000466391 FKBP3Q00688 224 aaKnown RBP9.04□□□□□ -0.96
LSG1-206ENST00000466391 TCP10Q12799 353 aa9.04□□□□□ -0.96
LSG1-206ENST00000466391 EDRF1Q3B7T1 1238 aa9.04□□□□□ -0.96
LSG1-206ENST00000466391 VWA3BQ502W6 1294 aa9.04□□□□□ -0.96
LSG1-206ENST00000466391 RSPO2Q6UXX9 243 aaPredicted RBP9.04□□□□□ -0.96
LSG1-206ENST00000466391 CEP68Q76N32 757 aa9.04□□□□□ -0.96
LSG1-206ENST00000466391 SRGAP1Q7Z6B7 1085 aa9.04□□□□□ -0.96
LSG1-206ENST00000466391 FAM83AQ86UY5 434 aa9.04□□□□□ -0.96
LSG1-206ENST00000466391 ZBED3Q96IU2 234 aaPredicted RBP9.04□□□□□ -0.96
LSG1-206ENST00000466391 NAPGQ99747 312 aaPredicted RBP9.04□□□□□ -0.96
LSG1-206ENST00000466391 POLR3CQ9BUI4 534 aaPredicted RBP9.04□□□□□ -0.96
LSG1-206ENST00000466391 NSUN3Q9H649 340 aaKnown RBP9.04□□□□□ -0.96
LSG1-206ENST00000466391 TDRD3Q9H7E2 651 aaKnown RBP9.04□□□□□ -0.96
LSG1-206ENST00000466391 SLC39A2Q9NP94 309 aa9.04□□□□□ -0.96
LSG1-206ENST00000466391 HDAC9Q9UKV0 1011 aa9.04□□□□□ -0.96
LSG1-206ENST00000466391 REXO2Q9Y3B8 237 aaKnown RBP9.04□□□□□ -0.96
LSG1-206ENST00000466391 PCDHAC2Q9Y5I4 1007 aa9.04□□□□□ -0.96
LSG1-206ENST00000466391 RBBP6Q7Z6E9 1792 aaKnown RBP9.04□□□□□ -0.96
LSG1-206ENST00000466391 CCDC163A0A0D9SF12 145 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 ANO9A1A5B4 782 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 C22orf46C9J442 243 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 MARCH6O60337 910 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 ZRANB2O95218 330 aaKnown RBP eCLIP9.03□□□□□ -0.96
LSG1-206ENST00000466391 GH2P01242 217 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 PLA2G4BP0C869 781 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 CYP11B2P19099 503 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 TRIM21P19474 475 aaKnown RBP9.03□□□□□ -0.96
LSG1-206ENST00000466391 YY1P25490 414 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 CHRNA5P30532 468 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 CACNB3P54284 484 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 GHRHRQ02643 423 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 LSAMPQ13449 338 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 BMT2Q1RMZ1 405 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 ZNF569Q5MCW4 686 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 USP17L6PQ6QN14 398 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 ZNF605Q86T29 641 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 FAM160B2Q86V87 743 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 CREBRFQ8IUR6 639 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 MSL3Q8N5Y2 521 aaKnown RBP9.03□□□□□ -0.96
LSG1-206ENST00000466391 SYT2Q8N9I0 419 aaPredicted RBP9.03□□□□□ -0.96
LSG1-206ENST00000466391 MSANTD4Q8NCY6 345 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 ACRBPQ8NEB7 543 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 AGBL3Q8NEM8 1001 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 PLEKHO2Q8TD55 490 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 UBE2Q2Q8WVN8 375 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 SYN2Q92777 582 aaPredicted RBP9.03□□□□□ -0.96
LSG1-206ENST00000466391 GOLGA1Q92805 767 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 PTPRN2Q92932 1015 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 TMEM169Q96HH4 297 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 PRMT6Q96LA8 375 aaPredicted RBP9.03□□□□□ -0.96
LSG1-206ENST00000466391 CHP1Q99653 195 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 TSGA10Q9BZW7 698 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 RANBP17Q9H2T7 1088 aaKnown RBP9.03□□□□□ -0.96
LSG1-206ENST00000466391 NDST4Q9H3R1 872 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 SH2D4AQ9H788 454 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 KCNK12Q9HB15 430 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 PANK4Q9NVE7 773 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 ZNF70Q9UC06 446 aaPredicted RBP9.03□□□□□ -0.96
LSG1-206ENST00000466391 FAM184BQ9ULE4 1060 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 RABGAP1Q9Y3P9 1069 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 COL4A3BPQ9Y5P4 624 aa9.03□□□□□ -0.96
LSG1-206ENST00000466391 CNTNAP1P78357 1384 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 STAT2P52630 851 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 HERVK_113P62684 666 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 GABREP78334 506 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 JAG1P78504 1218 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 RRP1BQ14684 758 aaKnown RBP9.02□□□□□ -0.97
LSG1-206ENST00000466391 BRD3Q15059 726 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 NFIL3Q16649 462 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 SHROOM1Q2M3G4 852 aaPredicted RBP9.02□□□□□ -0.97
LSG1-206ENST00000466391 PAPD7Q5XG87 772 aaKnown RBP9.02□□□□□ -0.97
LSG1-206ENST00000466391 GPBP1Q86WP2 473 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 KRT222Q8N1A0 295 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 SLC35F6Q8N357 371 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 TXLNBQ8N3L3 684 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 SAMD3Q8N6K7 520 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 TTLL6Q8N841 843 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 CHURC1Q8WUH1 139 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 TRMT2BQ96GJ1 504 aaKnown RBP9.02□□□□□ -0.97
LSG1-206ENST00000466391 P2RX7Q99572 595 aaKnown RBP9.02□□□□□ -0.97
LSG1-206ENST00000466391 SLF1Q9BQI6 1058 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 KCTD10Q9H3F6 313 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.02□□□□□ -0.97
LSG1-206ENST00000466391 RXFP1Q9HBX9 757 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 TUFT1Q9NNX1 390 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 LZTFL1Q9NQ48 299 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 CLDND1Q9NY35 253 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 NDOR1Q9UHB4 597 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 RAB21Q9UL25 225 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 ZBTB21Q9ULJ3 1066 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 TRAF3IP3Q9Y228 551 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 ATP8B3O60423 1300 aa9.02□□□□□ -0.97
LSG1-206ENST00000466391 COL4A5P29400 1685 aa9.01□□□□□ -0.97
LSG1-206ENST00000466391 IGLV3-22A0A075B6J6 115 aa9.01□□□□□ -0.97
LSG1-206ENST00000466391 A0A1W2PRG0 241 aa9.01□□□□□ -0.97
LSG1-206ENST00000466391 CCDC151A5D8V7 595 aa9.01□□□□□ -0.97
LSG1-206ENST00000466391 KRT86O43790 486 aa9.01□□□□□ -0.97
LSG1-206ENST00000466391 MED24O75448 989 aa9.01□□□□□ -0.97
LSG1-206ENST00000466391 IPO7O95373 1038 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms