RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 TWNKQ96RR1 684 aa19.81■□□□□ 0.76
CAPN3-209ENST00000466222 TSPYL1Q9H0U9 437 aa19.81■□□□□ 0.76
CAPN3-209ENST00000466222 ATP8B3O60423 1300 aa19.81■□□□□ 0.76
CAPN3-209ENST00000466222 HCRTO43612 131 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 EOMESO95936 686 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 TIMP1P01033 207 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 CYP3A5P20815 502 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 MYO1EQ12965 1108 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 TMCO2Q7Z6W1 182 aaPredicted RBP19.8■□□□□ 0.76
CAPN3-209ENST00000466222 RPUSD2Q8IZ73 545 aaKnown RBP19.8■□□□□ 0.76
CAPN3-209ENST00000466222 DDX1Q92499 740 aaKnown RBP19.8■□□□□ 0.76
CAPN3-209ENST00000466222 PCDHB18PQ96TA0 734 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 PACSIN1Q9BY11 444 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 SEPT11Q9NVA2 429 aaKnown RBP19.8■□□□□ 0.76
CAPN3-209ENST00000466222 TAS2R14Q9NYV8 317 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 HCSTQ9UBK5 93 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 BZW2Q9Y6E2 419 aaKnown RBP19.8■□□□□ 0.76
CAPN3-209ENST00000466222 GRID2IPA4D2P6 1211 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 BTNL10A8MVZ5 291 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 TMCO5BA8MYB1 307 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 TULP2O00295 520 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 DDHD2O94830 711 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 ACRP10323 421 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 RAG1P15918 1043 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 ANXA13P27216 316 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 LRPAP1P30533 357 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 EPHB4P54760 987 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 LILRA4P59901 499 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 SLC18A3Q16572 532 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 CFAP221Q4G0U5 840 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 EMBQ6PCB8 327 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 LRRC52Q8N7C0 313 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 WHAMMQ8TF30 809 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 APBB2Q92870 758 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 AGPAT1Q99943 283 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 MRPL45Q9BRJ2 306 aaKnown RBP19.8■□□□□ 0.76
CAPN3-209ENST00000466222 TLR10Q9BXR5 811 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 FAM204AQ9H8W3 233 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 CNTN6Q9UQ52 1028 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 NME7Q9Y5B8 376 aa19.8■□□□□ 0.76
CAPN3-209ENST00000466222 KPNA7A9QM74 516 aa19.79■□□□□ 0.76
CAPN3-209ENST00000466222 XPOTO43592 962 aaKnown RBP19.79■□□□□ 0.76
CAPN3-209ENST00000466222 TNNC1P63316 161 aa19.79■□□□□ 0.76
CAPN3-209ENST00000466222 NNTQ13423 1086 aa19.79■□□□□ 0.76
CAPN3-209ENST00000466222 GLB1LQ6UWU2 654 aa19.79■□□□□ 0.76
CAPN3-209ENST00000466222 CRIPAKQ8N1N5 446 aa19.79■□□□□ 0.76
CAPN3-209ENST00000466222 SLC30A5Q8TAD4 765 aa19.79■□□□□ 0.76
CAPN3-209ENST00000466222 HASPINQ8TF76 798 aa19.79■□□□□ 0.76
CAPN3-209ENST00000466222 ZSWIM1Q9BR11 485 aa19.79■□□□□ 0.76
CAPN3-209ENST00000466222 UBN1Q9NPG3 1134 aa19.79■□□□□ 0.76
CAPN3-209ENST00000466222 SLC38A7Q9NVC3 462 aa19.79■□□□□ 0.76
CAPN3-209ENST00000466222 TMEM161AQ9NX61 479 aa19.79■□□□□ 0.76
CAPN3-209ENST00000466222 PCDHB7Q9Y5E2 793 aa19.79■□□□□ 0.76
CAPN3-209ENST00000466222 RANBP2P49792 3224 aaKnown RBP19.79■□□□□ 0.76
CAPN3-209ENST00000466222 PODXLO00592 558 aa19.78■□□□□ 0.76
CAPN3-209ENST00000466222 KIAA0355O15063 1070 aa19.78■□□□□ 0.76
CAPN3-209ENST00000466222 UPP2O95045 317 aa19.78■□□□□ 0.76
CAPN3-209ENST00000466222 STAU1O95793 577 aaKnown RBP19.78■□□□□ 0.76
CAPN3-209ENST00000466222 ZNF132P52740 706 aa19.78■□□□□ 0.76
CAPN3-209ENST00000466222 SOWAHAQ2M3V2 549 aa19.78■□□□□ 0.76
CAPN3-209ENST00000466222 FAM81BQ96LP2 452 aa19.78■□□□□ 0.76
CAPN3-209ENST00000466222 TSPAN18Q96SJ8 248 aa19.78■□□□□ 0.76
CAPN3-209ENST00000466222 STIM2Q9P246 746 aa19.78■□□□□ 0.76
CAPN3-209ENST00000466222 NAGPAQ9UK23 515 aa19.78■□□□□ 0.76
CAPN3-209ENST00000466222 I3L4J1 428 aa19.78■□□□□ 0.76
CAPN3-209ENST00000466222 CCDC172P0C7W6 258 aa19.78■□□□□ 0.76
CAPN3-209ENST00000466222 PDE6CP51160 858 aa19.78■□□□□ 0.76
CAPN3-209ENST00000466222 CDR1P51861 262 aa19.78■□□□□ 0.76
CAPN3-209ENST00000466222 FMO1Q01740 532 aa19.78■□□□□ 0.76
CAPN3-209ENST00000466222 UPP1Q16831 310 aa19.78■□□□□ 0.76
CAPN3-209ENST00000466222 NOMO2Q5JPE7 1267 aa19.78■□□□□ 0.76
CAPN3-209ENST00000466222 LRRC1Q9BTT6 524 aa19.78■□□□□ 0.76
CAPN3-209ENST00000466222 PCDHGC5Q9Y5F6 944 aa19.78■□□□□ 0.76
CAPN3-209ENST00000466222 ANK1P16157 1881 aa19.77■□□□□ 0.76
CAPN3-209ENST00000466222 GOLGA6BA6NDN3 693 aa19.77■□□□□ 0.76
CAPN3-209ENST00000466222 CES2O00748 559 aa19.77■□□□□ 0.76
CAPN3-209ENST00000466222 ITGB1P05556 798 aa19.77■□□□□ 0.76
CAPN3-209ENST00000466222 TNFAIP3P21580 790 aa19.77■□□□□ 0.76
CAPN3-209ENST00000466222 TAF6P49848 677 aa19.77■□□□□ 0.76
CAPN3-209ENST00000466222 C8orf74Q6P047 294 aa19.77■□□□□ 0.76
CAPN3-209ENST00000466222 ALKBH5Q6P6C2 394 aaKnown RBP19.77■□□□□ 0.76
CAPN3-209ENST00000466222 TFAP2BQ92481 460 aa19.77■□□□□ 0.76
CAPN3-209ENST00000466222 CAVIN3Q969G5 261 aa19.77■□□□□ 0.76
CAPN3-209ENST00000466222 LPIN3Q9BQK8 851 aa19.77■□□□□ 0.76
CAPN3-209ENST00000466222 ELOVL4Q9GZR5 314 aa19.77■□□□□ 0.76
CAPN3-209ENST00000466222 TBC1D13Q9NVG8 400 aa19.77■□□□□ 0.76
CAPN3-209ENST00000466222 DNAJB4Q9UDY4 337 aa19.77■□□□□ 0.76
CAPN3-209ENST00000466222 CILPO75339 1184 aa19.76■□□□□ 0.75
CAPN3-209ENST00000466222 PARNO95453 639 aaKnown RBP19.76■□□□□ 0.75
CAPN3-209ENST00000466222 MYBL2P10244 700 aa19.76■□□□□ 0.75
CAPN3-209ENST00000466222 BRD2P25440 801 aaKnown RBP19.76■□□□□ 0.75
CAPN3-209ENST00000466222 GNA15P30679 374 aa19.76■□□□□ 0.75
CAPN3-209ENST00000466222 NDST1P52848 882 aa19.76■□□□□ 0.75
CAPN3-209ENST00000466222 RAD23BP54727 409 aa19.76■□□□□ 0.75
CAPN3-209ENST00000466222 GRIK3Q13003 919 aa19.76■□□□□ 0.75
CAPN3-209ENST00000466222 MFSD5Q6N075 450 aa19.76■□□□□ 0.75
CAPN3-209ENST00000466222 PASD1Q8IV76 773 aa19.76■□□□□ 0.75
CAPN3-209ENST00000466222 CASD1Q96PB1 797 aa19.76■□□□□ 0.75
CAPN3-209ENST00000466222 SALL4Q9UJQ4 1053 aa19.76■□□□□ 0.75
CAPN3-209ENST00000466222 NENFQ9UMX5 172 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms