RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 YIPF1Q9Y548 306 aa27.78■■■□□ 2.04
SMC4-206ENST00000465903 NME7Q9Y5B8 376 aa27.78■■■□□ 2.04
SMC4-206ENST00000465903 PTPRDP23468 1912 aa27.77■■■□□ 2.04
SMC4-206ENST00000465903 PI4K2BG5E9Z4 385 aa27.77■■■□□ 2.04
SMC4-206ENST00000465903 FAM163BP0C2L3 166 aa27.77■■■□□ 2.04
SMC4-206ENST00000465903 EPB41P11171 864 aaKnown RBP27.77■■■□□ 2.04
SMC4-206ENST00000465903 WARSP23381 471 aaKnown RBP27.77■■■□□ 2.04
SMC4-206ENST00000465903 LMO2P25791 158 aa27.77■■■□□ 2.04
SMC4-206ENST00000465903 GCLMP48507 274 aa27.77■■■□□ 2.04
SMC4-206ENST00000465903 OTOP3Q7RTS5 596 aa27.77■■■□□ 2.04
SMC4-206ENST00000465903 DCP1BQ8IZD4 617 aaKnown RBP27.77■■■□□ 2.04
SMC4-206ENST00000465903 TDRD5Q8NAT2 981 aaKnown RBP27.77■■■□□ 2.04
SMC4-206ENST00000465903 MMS19Q96T76 1030 aa27.77■■■□□ 2.04
SMC4-206ENST00000465903 HSFX1Q9UBD0 423 aa27.77■■■□□ 2.04
SMC4-206ENST00000465903 SLC16A3O15427 465 aaKnown RBP27.76■■■□□ 2.03
SMC4-206ENST00000465903 TACC1O75410 805 aa27.76■■■□□ 2.03
SMC4-206ENST00000465903 HLA-DRAP01903 254 aa27.76■■■□□ 2.03
SMC4-206ENST00000465903 PTPN2P17706 415 aa27.76■■■□□ 2.03
SMC4-206ENST00000465903 INTS6LQ5JSJ4 861 aaKnown RBP27.76■■■□□ 2.03
SMC4-206ENST00000465903 FOXR2Q6PJQ5 311 aa27.76■■■□□ 2.03
SMC4-206ENST00000465903 PLCD3Q8N3E9 789 aa27.76■■■□□ 2.03
SMC4-206ENST00000465903 GPT2Q8TD30 523 aa27.76■■■□□ 2.03
SMC4-206ENST00000465903 MUTYHQ9UIF7 546 aa27.76■■■□□ 2.03
SMC4-206ENST00000465903 CTNND2Q9UQB3 1225 aa27.76■■■□□ 2.03
SMC4-206ENST00000465903 FSHRP23945 695 aa27.75■■■□□ 2.03
SMC4-206ENST00000465903 TNNC1P63316 161 aa27.75■■■□□ 2.03
SMC4-206ENST00000465903 TSPY1Q01534 308 aa27.75■■■□□ 2.03
SMC4-206ENST00000465903 CCDC142Q17RM4 750 aa27.75■■■□□ 2.03
SMC4-206ENST00000465903 SGSM1Q2NKQ1 1148 aa27.75■■■□□ 2.03
SMC4-206ENST00000465903 C2orf15Q8WU43 125 aaKnown RBP27.75■■■□□ 2.03
SMC4-206ENST00000465903 ACSF2Q96CM8 615 aaPredicted RBP27.75■■■□□ 2.03
SMC4-206ENST00000465903 DNAJC25Q9H1X3 360 aa27.75■■■□□ 2.03
SMC4-206ENST00000465903 AVENQ9NQS1 362 aaPredicted RBP27.75■■■□□ 2.03
SMC4-206ENST00000465903 NXF1Q9UBU9 619 aaKnown RBP27.75■■■□□ 2.03
SMC4-206ENST00000465903 LIMD1Q9UGP4 676 aa27.75■■■□□ 2.03
SMC4-206ENST00000465903 ATP2C2O75185 946 aa27.74■■■□□ 2.03
SMC4-206ENST00000465903 LRRN2O75325 713 aa27.74■■■□□ 2.03
SMC4-206ENST00000465903 SOAT2O75908 522 aa27.74■■■□□ 2.03
SMC4-206ENST00000465903 RHOP08100 348 aa27.74■■■□□ 2.03
SMC4-206ENST00000465903 STX17P56962 302 aa27.74■■■□□ 2.03
SMC4-206ENST00000465903 SMARCB1Q12824 385 aa27.74■■■□□ 2.03
SMC4-206ENST00000465903 ZNF699Q32M78 642 aa27.74■■■□□ 2.03
SMC4-206ENST00000465903 PABPC1LQ4VXU2 614 aaKnown RBP27.74■■■□□ 2.03
SMC4-206ENST00000465903 ZNF667Q5HYK9 610 aa27.74■■■□□ 2.03
SMC4-206ENST00000465903 FAM171BQ6P995 826 aa27.74■■■□□ 2.03
SMC4-206ENST00000465903 GET4Q7L5D6 327 aaPredicted RBP27.74■■■□□ 2.03
SMC4-206ENST00000465903 FILIP1Q7Z7B0 1213 aa27.74■■■□□ 2.03
SMC4-206ENST00000465903 HS6ST3Q8IZP7 471 aa27.74■■■□□ 2.03
SMC4-206ENST00000465903 ITFG1Q8TB96 612 aa27.74■■■□□ 2.03
SMC4-206ENST00000465903 SPPL2BQ8TCT7 592 aa27.74■■■□□ 2.03
SMC4-206ENST00000465903 NUP62CLQ9H1M0 184 aa27.74■■■□□ 2.03
SMC4-206ENST00000465903 MMRN2Q9H8L6 949 aa27.74■■■□□ 2.03
SMC4-206ENST00000465903 TMEM8AQ9HCN3 771 aa27.74■■■□□ 2.03
SMC4-206ENST00000465903 GTF3C4Q9UKN8 822 aa27.74■■■□□ 2.03
SMC4-206ENST00000465903 MYBPHLA2RUH7 354 aa27.73■■■□□ 2.03
SMC4-206ENST00000465903 ASS1P00966 412 aaKnown RBP27.73■■■□□ 2.03
SMC4-206ENST00000465903 HAPLN1P10915 354 aaPredicted RBP27.73■■■□□ 2.03
SMC4-206ENST00000465903 PCSK1P29120 753 aa27.73■■■□□ 2.03
SMC4-206ENST00000465903 GBP2P32456 591 aaPredicted RBP27.73■■■□□ 2.03
SMC4-206ENST00000465903 GTF2H1P32780 548 aa27.73■■■□□ 2.03
SMC4-206ENST00000465903 SPOPLQ6IQ16 392 aa27.73■■■□□ 2.03
SMC4-206ENST00000465903 TAS1R2Q8TE23 839 aa27.73■■■□□ 2.03
SMC4-206ENST00000465903 CEP63Q96MT8 703 aa27.73■■■□□ 2.03
SMC4-206ENST00000465903 CDH9Q9ULB4 789 aa27.73■■■□□ 2.03
SMC4-206ENST00000465903 BICDL2A1A5D9 508 aa27.72■■■□□ 2.03
SMC4-206ENST00000465903 DCXO43602 365 aa27.72■■■□□ 2.03
SMC4-206ENST00000465903 PDGFRBP09619 1106 aa27.72■■■□□ 2.03
SMC4-206ENST00000465903 GNL1P36915 607 aaPredicted RBP27.72■■■□□ 2.03
SMC4-206ENST00000465903 CDH8P55286 799 aa27.72■■■□□ 2.03
SMC4-206ENST00000465903 PAK1Q13153 545 aa27.72■■■□□ 2.03
SMC4-206ENST00000465903 NFE2Q16621 373 aaPredicted RBP27.72■■■□□ 2.03
SMC4-206ENST00000465903 SLC5A9Q2M3M2 681 aa27.72■■■□□ 2.03
SMC4-206ENST00000465903 POTEHQ6S545 545 aa27.72■■■□□ 2.03
SMC4-206ENST00000465903 TAF4BQ92750 862 aa27.72■■■□□ 2.03
SMC4-206ENST00000465903 ZNF512Q96ME7 567 aaPredicted RBP27.72■■■□□ 2.03
SMC4-206ENST00000465903 SYT15Q9BQS2 421 aa27.72■■■□□ 2.03
SMC4-206ENST00000465903 CORO1BQ9BR76 489 aa27.72■■■□□ 2.03
SMC4-206ENST00000465903 PI4K2AQ9BTU6 479 aa27.72■■■□□ 2.03
SMC4-206ENST00000465903 LRRC3Q9BY71 257 aa27.72■■■□□ 2.03
SMC4-206ENST00000465903 SDCBP2Q9H190 292 aa27.72■■■□□ 2.03
SMC4-206ENST00000465903 SMYD3Q9H7B4 428 aa27.72■■■□□ 2.03
SMC4-206ENST00000465903 CRTAC1Q9NQ79 661 aa27.72■■■□□ 2.03
SMC4-206ENST00000465903 ABI2Q9NYB9 513 aaPredicted RBP27.72■■■□□ 2.03
SMC4-206ENST00000465903 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.72■■■□□ 2.03
SMC4-206ENST00000465903 PCDHB5Q9Y5E4 795 aa27.72■■■□□ 2.03
SMC4-206ENST00000465903 TRIOO75962 3097 aa27.71■■■□□ 2.03
SMC4-206ENST00000465903 GREB1Q4ZG55 1949 aa27.71■■■□□ 2.03
SMC4-206ENST00000465903 DENND4CQ5VZ89 1909 aa27.71■■■□□ 2.03
SMC4-206ENST00000465903 NRG2O14511 850 aaPredicted RBP27.71■■■□□ 2.03
SMC4-206ENST00000465903 ATF6P18850 670 aa27.71■■■□□ 2.03
SMC4-206ENST00000465903 PIK3CAP42336 1068 aa27.71■■■□□ 2.03
SMC4-206ENST00000465903 ALDH1A3P47895 512 aa27.71■■■□□ 2.03
SMC4-206ENST00000465903 TUFMP49411 452 aaKnown RBP27.71■■■□□ 2.03
SMC4-206ENST00000465903 PLD1Q13393 1074 aa27.71■■■□□ 2.03
SMC4-206ENST00000465903 MGAT5BQ3V5L5 792 aa27.71■■■□□ 2.03
SMC4-206ENST00000465903 PRSS36Q5K4E3 855 aa27.71■■■□□ 2.03
SMC4-206ENST00000465903 KRT39Q6A163 491 aa27.71■■■□□ 2.03
SMC4-206ENST00000465903 OR6B3Q8NGW1 331 aa27.71■■■□□ 2.03
SMC4-206ENST00000465903 MED15Q96RN5 788 aa27.71■■■□□ 2.03
SMC4-206ENST00000465903 APOBEC3GQ9HC16 384 aaKnown RBP27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms