RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 PIK3CAP42336 1068 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 MYL6P60660 151 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 ENPEPQ07075 957 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 DUSP4Q13115 394 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 NCOA4Q13772 614 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 CAMK4Q16566 473 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 PTPN21Q16825 1174 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 CCDC142Q17RM4 750 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 SLC5A9Q2M3M2 681 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 WDR72Q3MJ13 1102 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 ZACNQ401N2 412 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 DPH6Q7L8W6 267 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 LIMS2Q7Z4I7 341 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 DCP1BQ8IZD4 617 aaKnown RBP13.83□□□□□ -0.2
COL5A1-206ENST00000465877 PLCD3Q8N3E9 789 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 ATAD1Q8NBU5 361 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 SPPL2BQ8TCT7 592 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 C2orf15Q8WU43 125 aaKnown RBP13.83□□□□□ -0.2
COL5A1-206ENST00000465877 MMS19Q96T76 1030 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 EPHX3Q9H6B9 360 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 VRTNQ9H8Y1 702 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 ABI2Q9NYB9 513 aaPredicted RBP13.83□□□□□ -0.2
COL5A1-206ENST00000465877 HSFX1Q9UBD0 423 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 CTNND2Q9UQB3 1225 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 ANAPC1Q9H1A4 1944 aa13.83□□□□□ -0.2
COL5A1-206ENST00000465877 IKBKBO14920 756 aa13.82□□□□□ -0.2
COL5A1-206ENST00000465877 ATF6P18850 670 aa13.82□□□□□ -0.2
COL5A1-206ENST00000465877 WARSP23381 471 aaKnown RBP13.82□□□□□ -0.2
COL5A1-206ENST00000465877 PCSK1P29120 753 aa13.82□□□□□ -0.2
COL5A1-206ENST00000465877 LHX1P48742 406 aa13.82□□□□□ -0.2
COL5A1-206ENST00000465877 CDR1P51861 262 aa13.82□□□□□ -0.2
COL5A1-206ENST00000465877 ANKRD40Q6AI12 368 aa13.82□□□□□ -0.2
COL5A1-206ENST00000465877 KLHL10Q6JEL2 608 aa13.82□□□□□ -0.2
COL5A1-206ENST00000465877 SCARA5Q6ZMJ2 495 aa13.82□□□□□ -0.2
COL5A1-206ENST00000465877 SV2AQ7L0J3 742 aa13.82□□□□□ -0.2
COL5A1-206ENST00000465877 TRIML1Q8N9V2 468 aa13.82□□□□□ -0.2
COL5A1-206ENST00000465877 DHTKD1Q96HY7 919 aaPredicted RBP13.82□□□□□ -0.2
COL5A1-206ENST00000465877 PKMYT1Q99640 499 aa13.82□□□□□ -0.2
COL5A1-206ENST00000465877 SEPT5Q99719 369 aaPredicted RBP13.82□□□□□ -0.2
COL5A1-206ENST00000465877 ACBD6Q9BR61 282 aa13.82□□□□□ -0.2
COL5A1-206ENST00000465877 CORO1BQ9BR76 489 aa13.82□□□□□ -0.2
COL5A1-206ENST00000465877 MRPL45Q9BRJ2 306 aaKnown RBP13.82□□□□□ -0.2
COL5A1-206ENST00000465877 DNAJC25Q9H1X3 360 aa13.82□□□□□ -0.2
COL5A1-206ENST00000465877 CLSTN2Q9H4D0 955 aa13.82□□□□□ -0.2
COL5A1-206ENST00000465877 MMRN2Q9H8L6 949 aa13.82□□□□□ -0.2
COL5A1-206ENST00000465877 AVENQ9NQS1 362 aaPredicted RBP13.82□□□□□ -0.2
COL5A1-206ENST00000465877 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL5A1-206ENST00000465877 CEP72Q9P209 647 aa13.82□□□□□ -0.2
COL5A1-206ENST00000465877 EPS15L1Q9UBC2 864 aa13.82□□□□□ -0.2
COL5A1-206ENST00000465877 SORCS3Q9UPU3 1222 aa13.82□□□□□ -0.2
COL5A1-206ENST00000465877 TICRRQ7Z2Z1 1910 aa13.82□□□□□ -0.2
COL5A1-206ENST00000465877 TACC1O75410 805 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 SOAT2O75908 522 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 HLA-DRAP01903 254 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 CEBPBP17676 345 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 PTPN2P17706 415 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 ALDH1A3P47895 512 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 GCLMP48507 274 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 PSMC1P62191 440 aaKnown RBP13.81□□□□□ -0.2
COL5A1-206ENST00000465877 FKBP3Q00688 224 aaKnown RBP13.81□□□□□ -0.2
COL5A1-206ENST00000465877 PPP3CAQ08209 521 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 SMARCB1Q12824 385 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 PAK1Q13153 545 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 MTMR3Q13615 1198 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 NFE2Q16621 373 aaPredicted RBP13.81□□□□□ -0.2
COL5A1-206ENST00000465877 MGAT5BQ3V5L5 792 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 DCAF17Q5H9S7 520 aaPredicted RBP13.81□□□□□ -0.2
COL5A1-206ENST00000465877 ZNF667Q5HYK9 610 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 PRSS36Q5K4E3 855 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 IQCEQ6IPM2 695 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 PDZD4Q76G19 769 aaPredicted RBP13.81□□□□□ -0.2
COL5A1-206ENST00000465877 LRRTM3Q86VH5 581 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 NPAS3Q8IXF0 933 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 ITFG1Q8TB96 612 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 ING5Q8WYH8 240 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 FGF13Q92913 245 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 ELMO3Q96BJ8 720 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 SYT15Q9BQS2 421 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 SMYD3Q9H7B4 428 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 ASAH2Q9NR71 780 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 LMBRD1Q9NUN5 540 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 TMLHEQ9NVH6 421 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 KIAA1468Q9P260 1216 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 NXF1Q9UBU9 619 aaKnown RBP13.81□□□□□ -0.2
COL5A1-206ENST00000465877 LIMD1Q9UGP4 676 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 SLC27A5Q9Y2P5 690 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 MRPS23Q9Y3D9 190 aaKnown RBP13.81□□□□□ -0.2
COL5A1-206ENST00000465877 NME7Q9Y5B8 376 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 PCDHB5Q9Y5E4 795 aa13.81□□□□□ -0.2
COL5A1-206ENST00000465877 ZFP37Q9Y6Q3 630 aaPredicted RBP13.81□□□□□ -0.2
COL5A1-206ENST00000465877 FAM86C2PA6NEL3 165 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 PPP1R3GB7ZBB8 358 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 ASS1P00966 412 aaKnown RBP13.8□□□□□ -0.2
COL5A1-206ENST00000465877 CCR2P41597 374 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 RAP1GAPP47736 663 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 MXI1P50539 228 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 EPHB3P54753 998 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 EPHA5P54756 1037 aa13.8□□□□□ -0.2
COL5A1-206ENST00000465877 NOP14P78316 857 aaKnown RBP13.8□□□□□ -0.2
COL5A1-206ENST00000465877 TTI2Q6NXR4 508 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms